data_1EGC # _model_server_result.job_id 20CmSy1WBeYOi3OeU6Ad0Q _model_server_result.datetime_utc '2025-03-03 03:06:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1egc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":399}' # _entry.id 1EGC # _exptl.entry_id 1EGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EGC _cell.length_a 170 _cell.length_b 170 _cell.length_c 149.87 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 192 n n PA O2A FAD sing 193 n n PA O5B FAD sing 194 n n PA O3P FAD sing 195 n n O2A HOA2 FAD sing 196 n n O5B C5B FAD sing 197 n n C5B C4B FAD sing 198 n n C5B H51A FAD sing 199 n n C5B H52A FAD sing 200 n n C4B O4B FAD sing 201 n n C4B C3B FAD sing 202 n n C4B H4B FAD sing 203 n n O4B C1B FAD sing 204 n n C3B O3B FAD sing 205 n n C3B C2B FAD sing 206 n n C3B H3B FAD sing 207 n n O3B HO3A FAD sing 208 n n C2B O2B FAD sing 209 n n C2B C1B FAD sing 210 n n C2B H2B FAD sing 211 n n O2B HO2A FAD sing 212 n n C1B N9A FAD sing 213 n n C1B H1B FAD sing 214 n n N9A C8A FAD sing 215 n y N9A C4A FAD sing 216 n y C8A N7A FAD doub 217 n y C8A H8A FAD sing 218 n n N7A C5A FAD sing 219 n y C5A C6A FAD sing 220 n y C5A C4A FAD doub 221 n y C6A N6A FAD sing 222 n n C6A N1A FAD doub 223 n y N6A H61A FAD sing 224 n n N6A H62A FAD sing 225 n n N1A C2A FAD sing 226 n y C2A N3A FAD doub 227 n y C2A H2A FAD sing 228 n n N3A C4A FAD sing 229 n y N1 C2 FAD sing 230 n n N1 C10 FAD doub 231 n n C2 O2 FAD doub 232 n n C2 N3 FAD sing 233 n n N3 C4 FAD sing 234 n n N3 HN3 FAD sing 235 n n C4 O4 FAD doub 236 n n C4 C4X FAD sing 237 n n C4X N5 FAD doub 238 n n C4X C10 FAD sing 239 n n N5 C5X FAD sing 240 n n C5X C6 FAD doub 241 n y C5X C9A FAD sing 242 n y C6 C7 FAD sing 243 n y C6 H6 FAD sing 244 n n C7 C7M FAD sing 245 n n C7 C8 FAD doub 246 n y C7M HM71 FAD sing 247 n n C7M HM72 FAD sing 248 n n C7M HM73 FAD sing 249 n n C8 C8M FAD sing 250 n n C8 C9 FAD sing 251 n y C8M HM81 FAD sing 252 n n C8M HM82 FAD sing 253 n n C8M HM83 FAD sing 254 n n C9 C9A FAD doub 255 n y C9 H9 FAD sing 256 n n C9A N10 FAD sing 257 n n N10 C10 FAD sing 258 n n N10 C1' FAD sing 259 n n C1' C2' FAD sing 260 n n C1' "H1'1" FAD sing 261 n n C1' "H1'2" FAD sing 262 n n C2' O2' FAD sing 263 n n C2' C3' FAD sing 264 n n C2' H2' FAD sing 265 n n O2' HO2' FAD sing 266 n n C3' O3' FAD sing 267 n n C3' C4' FAD sing 268 n n C3' H3' FAD sing 269 n n O3' HO3' FAD sing 270 n n C4' O4' FAD sing 271 n n C4' C5' FAD sing 272 n n C4' H4' FAD sing 273 n n O4' HO4' FAD sing 274 n n C5' O5' FAD sing 275 n n C5' "H5'1" FAD sing 276 n n C5' "H5'2" FAD sing 277 n n O5' P FAD sing 278 n n P O1P FAD doub 279 n n P O2P FAD sing 280 n n P O3P FAD sing 281 n n O2P HOP2 FAD sing 282 n n # _atom_sites.entry_id 1EGC _atom_sites.fract_transf_matrix[1][1] 0.005882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CO8 A 1 400 400 CO8 CO8 . F 3 FAD A 1 399 399 FAD FAD . G 2 CO8 B 1 400 400 CO8 CO8 . H 3 FAD B 1 399 399 FAD FAD . I 2 CO8 C 1 400 400 CO8 CO8 . J 3 FAD C 1 399 399 FAD FAD . K 2 CO8 D 1 400 400 CO8 CO8 . L 3 FAD D 1 399 399 FAD FAD . M 4 HOH A 1 2007 2007 HOH HOH . M 4 HOH A 2 2011 2011 HOH HOH . M 4 HOH A 3 2020 2020 HOH HOH . M 4 HOH A 4 2021 2021 HOH HOH . M 4 HOH A 5 2022 2022 HOH HOH . M 4 HOH A 6 2034 2034 HOH HOH . M 4 HOH A 7 2041 2041 HOH HOH . M 4 HOH A 8 2056 2056 HOH HOH . M 4 HOH A 9 2058 2058 HOH HOH . M 4 HOH A 10 2063 2063 HOH HOH . M 4 HOH A 11 2064 2064 HOH HOH . M 4 HOH A 12 2067 2067 HOH HOH . M 4 HOH A 13 2078 2078 HOH HOH . M 4 HOH A 14 2084 2084 HOH HOH . M 4 HOH A 15 2086 2086 HOH HOH . M 4 HOH A 16 2093 2093 HOH HOH . M 4 HOH A 17 2095 2095 HOH HOH . M 4 HOH A 18 2096 2096 HOH HOH . M 4 HOH A 19 2105 2105 HOH HOH . M 4 HOH A 20 2110 2110 HOH HOH . M 4 HOH A 21 2111 2111 HOH HOH . M 4 HOH A 22 2113 2113 HOH HOH . M 4 HOH A 23 2117 2117 HOH HOH . M 4 HOH A 24 2126 2126 HOH HOH . M 4 HOH A 25 2127 2127 HOH HOH . M 4 HOH A 26 2134 2134 HOH HOH . M 4 HOH A 27 2136 2136 HOH HOH . N 4 HOH B 1 2001 2001 HOH HOH . N 4 HOH B 2 2002 2002 HOH HOH . N 4 HOH B 3 2003 2003 HOH HOH . N 4 HOH B 4 2005 2005 HOH HOH . N 4 HOH B 5 2006 2006 HOH HOH . N 4 HOH B 6 2013 2013 HOH HOH . N 4 HOH B 7 2015 2015 HOH HOH . N 4 HOH B 8 2018 2018 HOH HOH . N 4 HOH B 9 2024 2024 HOH HOH . N 4 HOH B 10 2025 2025 HOH HOH . N 4 HOH B 11 2031 2031 HOH HOH . N 4 HOH B 12 2035 2035 HOH HOH . N 4 HOH B 13 2036 2036 HOH HOH . N 4 HOH B 14 2042 2042 HOH HOH . N 4 HOH B 15 2043 2043 HOH HOH . N 4 HOH B 16 2050 2050 HOH HOH . N 4 HOH B 17 2051 2051 HOH HOH . N 4 HOH B 18 2057 2057 HOH HOH . N 4 HOH B 19 2060 2060 HOH HOH . N 4 HOH B 20 2074 2074 HOH HOH . N 4 HOH B 21 2076 2076 HOH HOH . N 4 HOH B 22 2081 2081 HOH HOH . N 4 HOH B 23 2083 2083 HOH HOH . N 4 HOH B 24 2085 2085 HOH HOH . N 4 HOH B 25 2087 2087 HOH HOH . N 4 HOH B 26 2089 2089 HOH HOH . N 4 HOH B 27 2097 2097 HOH HOH . N 4 HOH B 28 2099 2099 HOH HOH . N 4 HOH B 29 2102 2102 HOH HOH . N 4 HOH B 30 2104 2104 HOH HOH . N 4 HOH B 31 2109 2109 HOH HOH . N 4 HOH B 32 2114 2114 HOH HOH . N 4 HOH B 33 2122 2122 HOH HOH . O 4 HOH C 1 2004 2004 HOH HOH . O 4 HOH C 2 2008 2008 HOH HOH . O 4 HOH C 3 2010 2010 HOH HOH . O 4 HOH C 4 2023 2023 HOH HOH . O 4 HOH C 5 2026 2026 HOH HOH . O 4 HOH C 6 2027 2027 HOH HOH . O 4 HOH C 7 2029 2029 HOH HOH . O 4 HOH C 8 2032 2032 HOH HOH . O 4 HOH C 9 2038 2038 HOH HOH . O 4 HOH C 10 2040 2040 HOH HOH . O 4 HOH C 11 2047 2047 HOH HOH . O 4 HOH C 12 2049 2049 HOH HOH . O 4 HOH C 13 2052 2052 HOH HOH . O 4 HOH C 14 2054 2054 HOH HOH . O 4 HOH C 15 2055 2055 HOH HOH . O 4 HOH C 16 2061 2061 HOH HOH . O 4 HOH C 17 2062 2062 HOH HOH . O 4 HOH C 18 2065 2065 HOH HOH . O 4 HOH C 19 2068 2068 HOH HOH . O 4 HOH C 20 2069 2069 HOH HOH . O 4 HOH C 21 2070 2070 HOH HOH . O 4 HOH C 22 2073 2073 HOH HOH . O 4 HOH C 23 2082 2082 HOH HOH . O 4 HOH C 24 2090 2090 HOH HOH . O 4 HOH C 25 2091 2091 HOH HOH . O 4 HOH C 26 2092 2092 HOH HOH . O 4 HOH C 27 2100 2100 HOH HOH . O 4 HOH C 28 2101 2101 HOH HOH . O 4 HOH C 29 2106 2106 HOH HOH . O 4 HOH C 30 2107 2107 HOH HOH . O 4 HOH C 31 2112 2112 HOH HOH . O 4 HOH C 32 2116 2116 HOH HOH . O 4 HOH C 33 2118 2118 HOH HOH . O 4 HOH C 34 2125 2125 HOH HOH . O 4 HOH C 35 2128 2128 HOH HOH . O 4 HOH C 36 2129 2129 HOH HOH . O 4 HOH C 37 2130 2130 HOH HOH . O 4 HOH C 38 2131 2131 HOH HOH . O 4 HOH C 39 2132 2132 HOH HOH . O 4 HOH C 40 2133 2133 HOH HOH . O 4 HOH C 41 2137 2137 HOH HOH . P 4 HOH D 1 2009 2009 HOH HOH . P 4 HOH D 2 2012 2012 HOH HOH . P 4 HOH D 3 2016 2016 HOH HOH . P 4 HOH D 4 2017 2017 HOH HOH . P 4 HOH D 5 2019 2019 HOH HOH . P 4 HOH D 6 2028 2028 HOH HOH . P 4 HOH D 7 2030 2030 HOH HOH . P 4 HOH D 8 2033 2033 HOH HOH . P 4 HOH D 9 2037 2037 HOH HOH . P 4 HOH D 10 2039 2039 HOH HOH . P 4 HOH D 11 2044 2044 HOH HOH . P 4 HOH D 12 2045 2045 HOH HOH . P 4 HOH D 13 2046 2046 HOH HOH . P 4 HOH D 14 2048 2048 HOH HOH . P 4 HOH D 15 2053 2053 HOH HOH . P 4 HOH D 16 2059 2059 HOH HOH . P 4 HOH D 17 2071 2071 HOH HOH . P 4 HOH D 18 2072 2072 HOH HOH . P 4 HOH D 19 2075 2075 HOH HOH . P 4 HOH D 20 2077 2077 HOH HOH . P 4 HOH D 21 2079 2079 HOH HOH . P 4 HOH D 22 2080 2080 HOH HOH . P 4 HOH D 23 2088 2088 HOH HOH . P 4 HOH D 24 2094 2094 HOH HOH . P 4 HOH D 25 2098 2098 HOH HOH . P 4 HOH D 26 2103 2103 HOH HOH . P 4 HOH D 27 2108 2108 HOH HOH . P 4 HOH D 28 2115 2115 HOH HOH . P 4 HOH D 29 2119 2119 HOH HOH . P 4 HOH D 30 2120 2120 HOH HOH . P 4 HOH D 31 2123 2123 HOH HOH . P 4 HOH D 32 2124 2124 HOH HOH . P 4 HOH D 33 2135 2135 HOH HOH . P 4 HOH D 34 2138 2138 HOH HOH . P 4 HOH D 35 2139 2139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . H 3 153.353 41.205 52.056 1 18.47 ? PA FAD 399 B 1 HETATM 2 O O1A FAD . . . H 3 154.806 41.489 51.988 1 14.5 ? O1A FAD 399 B 1 HETATM 3 O O2A FAD . . . H 3 152.758 40.113 51.245 1 16.36 ? O2A FAD 399 B 1 HETATM 4 O O5B FAD . . . H 3 153.025 40.819 53.582 1 14.83 ? O5B FAD 399 B 1 HETATM 5 C C5B FAD . . . H 3 151.845 40.123 53.935 1 13.84 ? C5B FAD 399 B 1 HETATM 6 C C4B FAD . . . H 3 151.615 39.913 55.436 1 15.94 ? C4B FAD 399 B 1 HETATM 7 O O4B FAD . . . H 3 152.698 39.177 56.083 1 16.69 ? O4B FAD 399 B 1 HETATM 8 C C3B FAD . . . H 3 151.534 41.268 56.173 1 17.24 ? C3B FAD 399 B 1 HETATM 9 O O3B FAD . . . H 3 150.786 41.093 57.368 1 20.34 ? O3B FAD 399 B 1 HETATM 10 C C2B FAD . . . H 3 153.011 41.407 56.559 1 17.18 ? C2B FAD 399 B 1 HETATM 11 O O2B FAD . . . H 3 153.124 42.176 57.685 1 20.36 ? O2B FAD 399 B 1 HETATM 12 C C1B FAD . . . H 3 153.333 40.006 57.054 1 17.03 ? C1B FAD 399 B 1 HETATM 13 N N9A FAD . . . H 3 154.746 39.844 57.009 1 17.2 ? N9A FAD 399 B 1 HETATM 14 C C8A FAD . . . H 3 155.592 39.94 55.925 1 16.48 ? C8A FAD 399 B 1 HETATM 15 N N7A FAD . . . H 3 156.808 39.584 56.177 1 15.76 ? N7A FAD 399 B 1 HETATM 16 C C5A FAD . . . H 3 156.746 39.237 57.515 1 16.14 ? C5A FAD 399 B 1 HETATM 17 C C6A FAD . . . H 3 157.702 38.749 58.381 1 17.21 ? C6A FAD 399 B 1 HETATM 18 N N6A FAD . . . H 3 158.888 38.37 57.959 1 14.33 ? N6A FAD 399 B 1 HETATM 19 N N1A FAD . . . H 3 157.312 38.513 59.637 1 18.12 ? N1A FAD 399 B 1 HETATM 20 C C2A FAD . . . H 3 156.061 38.731 59.994 1 15.7 ? C2A FAD 399 B 1 HETATM 21 N N3A FAD . . . H 3 155.07 39.171 59.267 1 15.17 ? N3A FAD 399 B 1 HETATM 22 C C4A FAD . . . H 3 155.495 39.405 58.026 1 16.28 ? C4A FAD 399 B 1 HETATM 23 N N1 FAD . . . H 3 154.85 50.803 47.664 1 6.33 ? N1 FAD 399 B 1 HETATM 24 C C2 FAD . . . H 3 155.742 51.654 47.137 1 5.79 ? C2 FAD 399 B 1 HETATM 25 O O2 FAD . . . H 3 156.887 51.303 46.884 1 7.14 ? O2 FAD 399 B 1 HETATM 26 N N3 FAD . . . H 3 155.331 52.884 46.802 1 2.65 ? N3 FAD 399 B 1 HETATM 27 C C4 FAD . . . H 3 154.078 53.384 46.921 1 3.98 ? C4 FAD 399 B 1 HETATM 28 O O4 FAD . . . H 3 153.952 54.572 46.629 1 7.33 ? O4 FAD 399 B 1 HETATM 29 C C4X FAD . . . H 3 153.102 52.466 47.441 1 4.94 ? C4X FAD 399 B 1 HETATM 30 N N5 FAD . . . H 3 151.793 52.914 47.469 1 6.87 ? N5 FAD 399 B 1 HETATM 31 C C5X FAD . . . H 3 150.92 51.969 47.88 1 3.94 ? C5X FAD 399 B 1 HETATM 32 C C6 FAD . . . H 3 149.57 52.321 47.758 1 4.56 ? C6 FAD 399 B 1 HETATM 33 C C7 FAD . . . H 3 148.56 51.436 48.014 1 4.04 ? C7 FAD 399 B 1 HETATM 34 C C7M FAD . . . H 3 147.114 51.877 47.817 1 4.16 ? C7M FAD 399 B 1 HETATM 35 C C8 FAD . . . H 3 148.884 50.116 48.433 1 2.68 ? C8 FAD 399 B 1 HETATM 36 C C8M FAD . . . H 3 147.836 49.074 48.677 1 2 ? C8M FAD 399 B 1 HETATM 37 C C9 FAD . . . H 3 150.178 49.768 48.565 1 2.7 ? C9 FAD 399 B 1 HETATM 38 C C9A FAD . . . H 3 151.219 50.664 48.287 1 3.39 ? C9A FAD 399 B 1 HETATM 39 N N10 FAD . . . H 3 152.585 50.261 48.257 1 4.58 ? N10 FAD 399 B 1 HETATM 40 C C10 FAD . . . H 3 153.566 51.204 47.8 1 4.83 ? C10 FAD 399 B 1 HETATM 41 C C1' FAD . . . H 3 152.91 48.889 48.637 1 4.87 ? C1' FAD 399 B 1 HETATM 42 C C2' FAD . . . H 3 153.167 48.747 50.133 1 6.12 ? C2' FAD 399 B 1 HETATM 43 O O2' FAD . . . H 3 154.411 49.362 50.343 1 12.61 ? O2' FAD 399 B 1 HETATM 44 C C3' FAD . . . H 3 153.206 47.263 50.532 1 7.24 ? C3' FAD 399 B 1 HETATM 45 O O3' FAD . . . H 3 151.874 46.841 50.573 1 12.22 ? O3' FAD 399 B 1 HETATM 46 C C4' FAD . . . H 3 153.622 46.84 51.946 1 7.52 ? C4' FAD 399 B 1 HETATM 47 O O4' FAD . . . H 3 154.984 47.074 52.217 1 10.29 ? O4' FAD 399 B 1 HETATM 48 C C5' FAD . . . H 3 153.359 45.356 52.148 1 5.62 ? C5' FAD 399 B 1 HETATM 49 O O5' FAD . . . H 3 153.962 44.609 51.11 1 6.32 ? O5' FAD 399 B 1 HETATM 50 P P FAD . . . H 3 152.99 43.572 50.39 1 8.67 ? P FAD 399 B 1 HETATM 51 O O1P FAD . . . H 3 151.797 44.271 49.926 1 4.76 ? O1P FAD 399 B 1 HETATM 52 O O2P FAD . . . H 3 153.784 42.857 49.366 1 12.04 ? O2P FAD 399 B 1 HETATM 53 O O3P FAD . . . H 3 152.603 42.574 51.624 1 13.07 ? O3P FAD 399 B 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 1319 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 53 #