data_1EHJ # _model_server_result.job_id jAdFMva-WPUKrRrcEciSKw _model_server_result.datetime_utc '2025-03-27 00:29:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ehj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1066}' # _entry.id 1EHJ # _exptl.entry_id 1EHJ _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EHJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 26 A CYS 26 1_555 B CAB HEC . A HEC 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale2 A SG CYS 29 A CYS 29 1_555 B CAC HEC . A HEC 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? covale ? covale3 A SG CYS 49 A CYS 49 1_555 C CAB HEC . A HEC 1053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale4 A SG CYS 52 A CYS 52 1_555 C CAC HEC . A HEC 1053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? covale ? covale5 A SG CYS 62 A CYS 62 1_555 D CAB HEC . A HEC 1066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? covale ? covale6 A SG CYS 65 A CYS 65 1_555 D CAC HEC . A HEC 1066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 B FE HEC . A HEC 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc2 A NE2 HIS 20 A HIS 20 1_555 C FE HEC . A HEC 1053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc3 A NE2 HIS 30 A HIS 30 1_555 B FE HEC . A HEC 1030 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc4 A NE2 HIS 45 A HIS 45 1_555 D FE HEC . A HEC 1066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc5 A NE2 HIS 53 A HIS 53 1_555 C FE HEC . A HEC 1053 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc6 A NE2 HIS 66 A HIS 66 1_555 D FE HEC . A HEC 1066 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 84 n n FE NB HEC sing 85 n n FE NC HEC sing 86 n n FE ND HEC sing 87 n n CHA C1A HEC doub 88 n n CHA C4D HEC sing 89 n n CHA HHA HEC sing 90 n n CHB C4A HEC doub 91 n n CHB C1B HEC sing 92 n n CHB HHB HEC sing 93 n n CHC C4B HEC doub 94 n n CHC C1C HEC sing 95 n n CHC HHC HEC sing 96 n n CHD C4C HEC doub 97 n n CHD C1D HEC sing 98 n n CHD HHD HEC sing 99 n n NA C1A HEC sing 100 n y NA C4A HEC sing 101 n y C1A C2A HEC sing 102 n y C2A C3A HEC doub 103 n y C2A CAA HEC sing 104 n n C3A C4A HEC sing 105 n y C3A CMA HEC sing 106 n n CMA HMA1 HEC sing 107 n n CMA HMA2 HEC sing 108 n n CMA HMA3 HEC sing 109 n n CAA CBA HEC sing 110 n n CAA HAA1 HEC sing 111 n n CAA HAA2 HEC sing 112 n n CBA CGA HEC sing 113 n n CBA HBA1 HEC sing 114 n n CBA HBA2 HEC sing 115 n n CGA O1A HEC doub 116 n n CGA O2A HEC sing 117 n n O2A H2A HEC sing 118 n n NB C1B HEC sing 119 n y NB C4B HEC sing 120 n y C1B C2B HEC doub 121 n y C2B C3B HEC sing 122 n y C2B CMB HEC sing 123 n n C3B C4B HEC sing 124 n y C3B CAB HEC doub 125 e n CMB HMB1 HEC sing 126 n n CMB HMB2 HEC sing 127 n n CMB HMB3 HEC sing 128 n n CAB CBB HEC sing 129 n n CAB HAB HEC sing 130 n n CBB HBB1 HEC sing 131 n n CBB HBB2 HEC sing 132 n n CBB HBB3 HEC sing 133 n n NC C1C HEC sing 134 n y NC C4C HEC sing 135 n y C1C C2C HEC doub 136 n y C2C C3C HEC sing 137 n y C2C CMC HEC sing 138 n n C3C C4C HEC sing 139 n y C3C CAC HEC doub 140 e n CMC HMC1 HEC sing 141 n n CMC HMC2 HEC sing 142 n n CMC HMC3 HEC sing 143 n n CAC CBC HEC sing 144 n n CAC HAC HEC sing 145 n n CBC HBC1 HEC sing 146 n n CBC HBC2 HEC sing 147 n n CBC HBC3 HEC sing 148 n n ND C1D HEC sing 149 n y ND C4D HEC sing 150 n y C1D C2D HEC doub 151 n y C2D C3D HEC sing 152 n y C2D CMD HEC sing 153 n n C3D C4D HEC doub 154 n y C3D CAD HEC sing 155 n n CMD HMD1 HEC sing 156 n n CMD HMD2 HEC sing 157 n n CMD HMD3 HEC sing 158 n n CAD CBD HEC sing 159 n n CAD HAD1 HEC sing 160 n n CAD HAD2 HEC sing 161 n n CBD CGD HEC sing 162 n n CBD HBD1 HEC sing 163 n n CBD HBD2 HEC sing 164 n n CGD O1D HEC doub 165 n n CGD O2D HEC sing 166 n n O2D H2D HEC sing 167 n n # _atom_sites.entry_id 1EHJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 1030 30 HEC HEC . C 2 HEC A 1 1053 53 HEC HEC . D 2 HEC A 1 1066 66 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . D 2 0.712 -6.499 7.649 1 10 ? FE HEC 1066 A 1 HETATM 2 C CHA HEC . . . D 2 3.331 -4.636 8.821 1 10 ? CHA HEC 1066 A 1 HETATM 3 C CHB HEC . . . D 2 0.924 -8.583 10.345 1 10 ? CHB HEC 1066 A 1 HETATM 4 C CHC HEC . . . D 2 -1.902 -8.375 6.411 1 10 ? CHC HEC 1066 A 1 HETATM 5 C CHD HEC . . . D 2 0.625 -4.544 4.766 1 10 ? CHD HEC 1066 A 1 HETATM 6 N NA HEC . . . D 2 1.856 -6.567 9.277 1 10 ? NA HEC 1066 A 1 HETATM 7 C C1A HEC . . . D 2 2.852 -5.679 9.575 1 10 ? C1A HEC 1066 A 1 HETATM 8 C C2A HEC . . . D 2 3.444 -6.088 10.828 1 10 ? C2A HEC 1066 A 1 HETATM 9 C C3A HEC . . . D 2 2.71 -7.143 11.298 1 10 ? C3A HEC 1066 A 1 HETATM 10 C C4A HEC . . . D 2 1.76 -7.492 10.268 1 10 ? C4A HEC 1066 A 1 HETATM 11 C CMA HEC . . . D 2 2.912 -7.795 12.648 1 10 ? CMA HEC 1066 A 1 HETATM 12 C CAA HEC . . . D 2 4.755 -5.624 11.418 1 10 ? CAA HEC 1066 A 1 HETATM 13 C CBA HEC . . . D 2 5.931 -6.456 10.889 1 10 ? CBA HEC 1066 A 1 HETATM 14 C CGA HEC . . . D 2 7.286 -6.028 11.455 1 10 ? CGA HEC 1066 A 1 HETATM 15 O O1A HEC . . . D 2 8.307 -6.33 10.796 1 10 ? O1A HEC 1066 A 1 HETATM 16 O O2A HEC . . . D 2 7.282 -5.431 12.558 1 10 ? O2A HEC 1066 A 1 HETATM 17 N NB HEC . . . D 2 -0.253 -8.192 8.224 1 10 ? NB HEC 1066 A 1 HETATM 18 C C1B HEC . . . D 2 0.013 -8.877 9.359 1 10 ? C1B HEC 1066 A 1 HETATM 19 C C2B HEC . . . D 2 -0.9 -9.988 9.455 1 10 ? C2B HEC 1066 A 1 HETATM 20 C C3B HEC . . . D 2 -1.775 -9.884 8.4 1 10 ? C3B HEC 1066 A 1 HETATM 21 C C4B HEC . . . D 2 -1.312 -8.772 7.589 1 10 ? C4B HEC 1066 A 1 HETATM 22 C CMB HEC . . . D 2 -0.927 -11.012 10.566 1 10 ? CMB HEC 1066 A 1 HETATM 23 C CAB HEC . . . D 2 -3.09 -10.638 8.253 1 10 ? CAB HEC 1066 A 1 HETATM 24 C CBB HEC . . . D 2 -4.044 -10.457 9.439 1 10 ? CBB HEC 1066 A 1 HETATM 25 N NC HEC . . . D 2 -0.459 -6.429 5.97 1 10 ? NC HEC 1066 A 1 HETATM 26 C C1C HEC . . . D 2 -1.475 -7.282 5.699 1 10 ? C1C HEC 1066 A 1 HETATM 27 C C2C HEC . . . D 2 -2.037 -6.947 4.416 1 10 ? C2C HEC 1066 A 1 HETATM 28 C C3C HEC . . . D 2 -1.383 -5.821 3.967 1 10 ? C3C HEC 1066 A 1 HETATM 29 C C4C HEC . . . D 2 -0.326 -5.541 4.929 1 10 ? C4C HEC 1066 A 1 HETATM 30 C CMC HEC . . . D 2 -3.055 -7.797 3.682 1 10 ? CMC HEC 1066 A 1 HETATM 31 C CAC HEC . . . D 2 -1.681 -5.059 2.679 1 10 ? CAC HEC 1066 A 1 HETATM 32 C CBC HEC . . . D 2 -3.115 -4.531 2.587 1 10 ? CBC HEC 1066 A 1 HETATM 33 N ND HEC . . . D 2 1.768 -4.877 6.944 1 10 ? ND HEC 1066 A 1 HETATM 34 C C1D HEC . . . D 2 1.585 -4.27 5.73 1 10 ? C1D HEC 1066 A 1 HETATM 35 C C2D HEC . . . D 2 2.597 -3.239 5.601 1 10 ? C2D HEC 1066 A 1 HETATM 36 C C3D HEC . . . D 2 3.399 -3.293 6.719 1 10 ? C3D HEC 1066 A 1 HETATM 37 C C4D HEC . . . D 2 2.826 -4.3 7.589 1 10 ? C4D HEC 1066 A 1 HETATM 38 C CMD HEC . . . D 2 2.795 -2.28 4.446 1 10 ? CMD HEC 1066 A 1 HETATM 39 C CAD HEC . . . D 2 4.632 -2.418 6.935 1 10 ? CAD HEC 1066 A 1 HETATM 40 C CBD HEC . . . D 2 5.874 -3.001 7.649 1 10 ? CBD HEC 1066 A 1 HETATM 41 C CGD HEC . . . D 2 6.163 -2.39 9.037 1 10 ? CGD HEC 1066 A 1 HETATM 42 O O1D HEC . . . D 2 6.489 -3.143 9.986 1 10 ? O1D HEC 1066 A 1 HETATM 43 O O2D HEC . . . D 2 5.998 -1.162 9.194 1 10 ? O2D HEC 1066 A 1 HETATM 44 H HHA HEC . . . D 2 4.16 -4.077 9.205 1 10 ? HHA HEC 1066 A 1 HETATM 45 H HHB HEC . . . D 2 0.948 -9.209 11.212 1 10 ? HHB HEC 1066 A 1 HETATM 46 H HHC HEC . . . D 2 -2.704 -8.951 5.997 1 10 ? HHC HEC 1066 A 1 HETATM 47 H HHD HEC . . . D 2 0.641 -4 3.834 1 10 ? HHD HEC 1066 A 1 HETATM 48 H HMA1 HEC . . . D 2 2.973 -7.011 13.403 1 10 ? HMA1 HEC 1066 A 1 HETATM 49 H HMA2 HEC . . . D 2 2.086 -8.448 12.917 1 10 ? HMA2 HEC 1066 A 1 HETATM 50 H HMA3 HEC . . . D 2 3.85 -8.349 12.645 1 10 ? HMA3 HEC 1066 A 1 HETATM 51 H HAA1 HEC . . . D 2 4.729 -5.717 12.502 1 10 ? HAA1 HEC 1066 A 1 HETATM 52 H HAA2 HEC . . . D 2 4.931 -4.579 11.181 1 10 ? HAA2 HEC 1066 A 1 HETATM 53 H HBA1 HEC . . . D 2 5.945 -6.392 9.8 1 10 ? HBA1 HEC 1066 A 1 HETATM 54 H HBA2 HEC . . . D 2 5.767 -7.494 11.174 1 10 ? HBA2 HEC 1066 A 1 HETATM 55 H HMB1 HEC . . . D 2 -1.35 -10.562 11.464 1 10 ? HMB1 HEC 1066 A 1 HETATM 56 H HMB2 HEC . . . D 2 -1.526 -11.873 10.277 1 10 ? HMB2 HEC 1066 A 1 HETATM 57 H HMB3 HEC . . . D 2 0.084 -11.359 10.766 1 10 ? HMB3 HEC 1066 A 1 HETATM 58 H HAB HEC . . . D 2 -3.626 -10.259 7.395 1 10 ? HAB HEC 1066 A 1 HETATM 59 H HBB1 HEC . . . D 2 -4.209 -9.395 9.62 1 10 ? HBB1 HEC 1066 A 1 HETATM 60 H HBB2 HEC . . . D 2 -5.003 -10.922 9.205 1 10 ? HBB2 HEC 1066 A 1 HETATM 61 H HBB3 HEC . . . D 2 -3.647 -10.917 10.342 1 10 ? HBB3 HEC 1066 A 1 HETATM 62 H HMC1 HEC . . . D 2 -4.023 -7.717 4.176 1 10 ? HMC1 HEC 1066 A 1 HETATM 63 H HMC2 HEC . . . D 2 -3.154 -7.494 2.643 1 10 ? HMC2 HEC 1066 A 1 HETATM 64 H HMC3 HEC . . . D 2 -2.729 -8.839 3.7 1 10 ? HMC3 HEC 1066 A 1 HETATM 65 H HAC HEC . . . D 2 -1.046 -4.182 2.612 1 10 ? HAC HEC 1066 A 1 HETATM 66 H HBC1 HEC . . . D 2 -3.314 -3.898 3.446 1 10 ? HBC1 HEC 1066 A 1 HETATM 67 H HBC2 HEC . . . D 2 -3.226 -3.931 1.685 1 10 ? HBC2 HEC 1066 A 1 HETATM 68 H HBC3 HEC . . . D 2 -3.84 -5.342 2.568 1 10 ? HBC3 HEC 1066 A 1 HETATM 69 H HMD1 HEC . . . D 2 3.04 -1.291 4.834 1 10 ? HMD1 HEC 1066 A 1 HETATM 70 H HMD2 HEC . . . D 2 3.629 -2.618 3.834 1 10 ? HMD2 HEC 1066 A 1 HETATM 71 H HMD3 HEC . . . D 2 1.902 -2.191 3.833 1 10 ? HMD3 HEC 1066 A 1 HETATM 72 H HAD1 HEC . . . D 2 4.319 -1.511 7.434 1 10 ? HAD1 HEC 1066 A 1 HETATM 73 H HAD2 HEC . . . D 2 4.986 -2.108 5.952 1 10 ? HAD2 HEC 1066 A 1 HETATM 74 H HBD1 HEC . . . D 2 6.741 -2.77 7.029 1 10 ? HBD1 HEC 1066 A 1 HETATM 75 H HBD2 HEC . . . D 2 5.796 -4.087 7.703 1 10 ? HBD2 HEC 1066 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 75 #