data_1EJA # _model_server_result.job_id bUHAZPuE-I_5vWuEKC7GUA _model_server_result.datetime_utc '2025-02-05 06:40:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1eja # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":246}' # _entry.id 1EJA # _exptl.entry_id 1EJA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EJA _cell.length_a 70.02 _cell.length_b 70.02 _cell.length_c 119.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EJA _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 B SG CYS 10 B CYS 10 1_555 B SG CYS 21 B CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf8 B SG CYS 15 B CYS 15 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf9 B SG CYS 28 B CYS 28 1_555 B SG CYS 48 B CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf10 B SG CYS 33 B CYS 33 1_555 B SG CYS 52 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 B SG CYS 37 B CYS 37 1_555 B SG CYS 54 B CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 C NA NA . A NA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 C NA NA . A NA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 C NA NA . A NA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 A OE1 GLU 59 A GLU 77 1_555 C NA NA . A NA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.875 ? metalc ? metalc5 A OE2 GLU 62 A GLU 80 1_555 C NA NA . A NA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1EJA _atom_sites.fract_transf_matrix[1][1] 0.014282 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014282 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 246 1 NA SOD . D 4 HOH A 1 247 1 HOH HOH . D 4 HOH A 2 248 2 HOH HOH . D 4 HOH A 3 249 3 HOH HOH . D 4 HOH A 4 250 4 HOH HOH . D 4 HOH A 5 251 5 HOH HOH . D 4 HOH A 6 252 6 HOH HOH . D 4 HOH A 7 253 7 HOH HOH . D 4 HOH A 8 254 8 HOH HOH . D 4 HOH A 9 255 9 HOH HOH . D 4 HOH A 10 256 10 HOH HOH . D 4 HOH A 11 257 11 HOH HOH . D 4 HOH A 12 258 12 HOH HOH . D 4 HOH A 13 259 13 HOH HOH . D 4 HOH A 14 260 14 HOH HOH . D 4 HOH A 15 261 15 HOH HOH . D 4 HOH A 16 262 16 HOH HOH . D 4 HOH A 17 263 17 HOH HOH . D 4 HOH A 18 264 18 HOH HOH . D 4 HOH A 19 265 19 HOH HOH . D 4 HOH A 20 266 20 HOH HOH . D 4 HOH A 21 267 21 HOH HOH . D 4 HOH A 22 268 22 HOH HOH . D 4 HOH A 23 269 23 HOH HOH . D 4 HOH A 24 270 24 HOH HOH . D 4 HOH A 25 271 25 HOH HOH . D 4 HOH A 26 272 26 HOH HOH . D 4 HOH A 27 273 27 HOH HOH . D 4 HOH A 28 274 28 HOH HOH . D 4 HOH A 29 275 29 HOH HOH . D 4 HOH A 30 276 30 HOH HOH . D 4 HOH A 31 277 31 HOH HOH . D 4 HOH A 32 278 32 HOH HOH . D 4 HOH A 33 279 33 HOH HOH . D 4 HOH A 34 280 34 HOH HOH . D 4 HOH A 35 281 35 HOH HOH . D 4 HOH A 36 282 36 HOH HOH . D 4 HOH A 37 283 37 HOH HOH . D 4 HOH A 38 284 38 HOH HOH . D 4 HOH A 39 285 39 HOH HOH . D 4 HOH A 40 286 40 HOH HOH . D 4 HOH A 41 287 41 HOH HOH . D 4 HOH A 42 288 42 HOH HOH . D 4 HOH A 43 289 43 HOH HOH . D 4 HOH A 44 290 44 HOH HOH . D 4 HOH A 45 291 45 HOH HOH . D 4 HOH A 46 292 46 HOH HOH . D 4 HOH A 47 293 47 HOH HOH . D 4 HOH A 48 294 48 HOH HOH . D 4 HOH A 49 295 49 HOH HOH . D 4 HOH A 50 296 50 HOH HOH . D 4 HOH A 51 297 51 HOH HOH . D 4 HOH A 52 298 52 HOH HOH . D 4 HOH A 53 299 53 HOH HOH . D 4 HOH A 54 300 54 HOH HOH . D 4 HOH A 55 301 55 HOH HOH . D 4 HOH A 56 302 56 HOH HOH . D 4 HOH A 57 303 57 HOH HOH . D 4 HOH A 58 304 58 HOH HOH . D 4 HOH A 59 305 59 HOH HOH . D 4 HOH A 60 306 60 HOH HOH . D 4 HOH A 61 307 61 HOH HOH . D 4 HOH A 62 308 62 HOH HOH . D 4 HOH A 63 309 63 HOH HOH . D 4 HOH A 64 310 64 HOH HOH . D 4 HOH A 65 311 65 HOH HOH . D 4 HOH A 66 312 66 HOH HOH . D 4 HOH A 67 313 67 HOH HOH . D 4 HOH A 68 314 68 HOH HOH . D 4 HOH A 69 315 69 HOH HOH . D 4 HOH A 70 316 70 HOH HOH . D 4 HOH A 71 317 71 HOH HOH . D 4 HOH A 72 318 72 HOH HOH . D 4 HOH A 73 319 73 HOH HOH . D 4 HOH A 74 320 74 HOH HOH . D 4 HOH A 75 321 75 HOH HOH . D 4 HOH A 76 322 76 HOH HOH . D 4 HOH A 77 323 77 HOH HOH . D 4 HOH A 78 324 78 HOH HOH . D 4 HOH A 79 325 79 HOH HOH . D 4 HOH A 80 326 80 HOH HOH . D 4 HOH A 81 327 81 HOH HOH . D 4 HOH A 82 328 82 HOH HOH . D 4 HOH A 83 329 83 HOH HOH . D 4 HOH A 84 330 84 HOH HOH . E 4 HOH B 1 85 85 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.812 _atom_site.Cartn_y 10.342 _atom_site.Cartn_z 16.598 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 246 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #