data_1ELL # _model_server_result.job_id FbBhLPkU0Sf4mIiL33DUXw _model_server_result.datetime_utc '2025-04-04 06:46:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ell # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":353}' # _entry.id 1ELL # _exptl.entry_id 1ELL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.44 _cell.angle_gamma 90 _cell.entry_id 1ELL _cell.length_a 47.294 _cell.length_b 60.173 _cell.length_c 51.752 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ELL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 138 P CYS 138 1_555 A SG CYS 161 P CYS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc1 A ND1 HIS 13 P HIS 13 1_555 E CD CD . P CD 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc2 A OE1 GLU 17 P GLU 17 1_555 E CD CD . P CD 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc3 A OE2 GLU 17 P GLU 17 1_555 E CD CD . P CD 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc4 A NE2 HIS 29 P HIS 29 1_555 D CD CD . P CD 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc5 A ND1 HIS 69 P HIS 69 1_555 B CD CD . P CD 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc6 A OE1 GLU 72 P GLU 72 1_555 B CD CD . P CD 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc7 A OE2 GLU 72 P GLU 72 1_555 B CD CD . P CD 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc8 A ND1 HIS 196 P HIS 196 1_555 B CD CD . P CD 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 A ND1 HIS 303 P HIS 303 1_555 C CD CD . P CD 351 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.354 ? metalc ? metalc10 A ND1 HIS 303 P HIS 303 1_555 C CD CD . P CD 351 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.73 ? metalc ? metalc11 B CD CD . P CD 350 1_555 F O HOH . P HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc12 B CD CD . P CD 350 1_555 F O HOH . P HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc13 C CD CD . P CD 351 1_555 F O HOH . P HOH 495 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc14 D CD CD . P CD 353 1_555 F O HOH . P HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc15 D CD CD . P CD 353 1_555 F O HOH . P HOH 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc16 E CD CD . P CD 354 1_555 F O HOH . P HOH 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ELL _atom_sites.fract_transf_matrix[1][1] 0.021144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002761 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019487 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD P 1 350 350 CD CD . C 2 CD P 1 351 351 CD CD . D 2 CD P 1 353 353 CD CD . E 2 CD P 1 354 354 CD CD . F 3 HOH P 1 401 401 HOH HOH . F 3 HOH P 2 402 402 HOH HOH . F 3 HOH P 3 403 403 HOH HOH . F 3 HOH P 4 404 404 HOH HOH . F 3 HOH P 5 405 405 HOH HOH . F 3 HOH P 6 406 406 HOH HOH . F 3 HOH P 7 407 407 HOH HOH . F 3 HOH P 8 408 408 HOH HOH . F 3 HOH P 9 409 409 HOH HOH . F 3 HOH P 10 410 410 HOH HOH . F 3 HOH P 11 411 411 HOH HOH . F 3 HOH P 12 412 412 HOH HOH . F 3 HOH P 13 413 413 HOH HOH . F 3 HOH P 14 414 414 HOH HOH . F 3 HOH P 15 415 415 HOH HOH . F 3 HOH P 16 416 416 HOH HOH . F 3 HOH P 17 417 417 HOH HOH . F 3 HOH P 18 418 418 HOH HOH . F 3 HOH P 19 419 419 HOH HOH . F 3 HOH P 20 420 420 HOH HOH . F 3 HOH P 21 421 421 HOH HOH . F 3 HOH P 22 422 422 HOH HOH . F 3 HOH P 23 423 423 HOH HOH . F 3 HOH P 24 424 424 HOH HOH . F 3 HOH P 25 425 425 HOH HOH . F 3 HOH P 26 426 426 HOH HOH . F 3 HOH P 27 427 427 HOH HOH . F 3 HOH P 28 428 428 HOH HOH . F 3 HOH P 29 429 429 HOH HOH . F 3 HOH P 30 430 430 HOH HOH . F 3 HOH P 31 431 431 HOH HOH . F 3 HOH P 32 432 432 HOH HOH . F 3 HOH P 33 433 433 HOH HOH . F 3 HOH P 34 434 434 HOH HOH . F 3 HOH P 35 435 435 HOH HOH . F 3 HOH P 36 436 436 HOH HOH . F 3 HOH P 37 437 437 HOH HOH . F 3 HOH P 38 438 438 HOH HOH . F 3 HOH P 39 439 439 HOH HOH . F 3 HOH P 40 440 440 HOH HOH . F 3 HOH P 41 441 441 HOH HOH . F 3 HOH P 42 442 442 HOH HOH . F 3 HOH P 43 444 444 HOH HOH . F 3 HOH P 44 445 445 HOH HOH . F 3 HOH P 45 446 446 HOH HOH . F 3 HOH P 46 447 447 HOH HOH . F 3 HOH P 47 448 448 HOH HOH . F 3 HOH P 48 449 449 HOH HOH . F 3 HOH P 49 450 450 HOH HOH . F 3 HOH P 50 451 451 HOH HOH . F 3 HOH P 51 452 452 HOH HOH . F 3 HOH P 52 453 453 HOH HOH . F 3 HOH P 53 454 454 HOH HOH . F 3 HOH P 54 455 455 HOH HOH . F 3 HOH P 55 456 456 HOH HOH . F 3 HOH P 56 457 457 HOH HOH . F 3 HOH P 57 458 458 HOH HOH . F 3 HOH P 58 459 459 HOH HOH . F 3 HOH P 59 460 460 HOH HOH . F 3 HOH P 60 461 461 HOH HOH . F 3 HOH P 61 462 462 HOH HOH . F 3 HOH P 62 463 463 HOH HOH . F 3 HOH P 63 464 464 HOH HOH . F 3 HOH P 64 465 465 HOH HOH . F 3 HOH P 65 466 466 HOH HOH . F 3 HOH P 66 467 467 HOH HOH . F 3 HOH P 67 468 468 HOH HOH . F 3 HOH P 68 469 469 HOH HOH . F 3 HOH P 69 470 470 HOH HOH . F 3 HOH P 70 471 471 HOH HOH . F 3 HOH P 71 472 472 HOH HOH . F 3 HOH P 72 473 473 HOH HOH . F 3 HOH P 73 474 474 HOH HOH . F 3 HOH P 74 475 475 HOH HOH . F 3 HOH P 75 476 476 HOH HOH . F 3 HOH P 76 477 477 HOH HOH . F 3 HOH P 77 478 478 HOH HOH . F 3 HOH P 78 479 479 HOH HOH . F 3 HOH P 79 480 480 HOH HOH . F 3 HOH P 80 481 481 HOH HOH . F 3 HOH P 81 482 482 HOH HOH . F 3 HOH P 82 483 483 HOH HOH . F 3 HOH P 83 484 484 HOH HOH . F 3 HOH P 84 485 485 HOH HOH . F 3 HOH P 85 486 486 HOH HOH . F 3 HOH P 86 487 487 HOH HOH . F 3 HOH P 87 488 488 HOH HOH . F 3 HOH P 88 489 489 HOH HOH . F 3 HOH P 89 490 490 HOH HOH . F 3 HOH P 90 491 491 HOH HOH . F 3 HOH P 91 492 492 HOH HOH . F 3 HOH P 92 493 493 HOH HOH . F 3 HOH P 93 494 494 HOH HOH . F 3 HOH P 94 495 495 HOH HOH . F 3 HOH P 95 496 496 HOH HOH . F 3 HOH P 96 497 497 HOH HOH . F 3 HOH P 97 498 498 HOH HOH . F 3 HOH P 98 499 499 HOH HOH . F 3 HOH P 99 501 501 HOH HOH . F 3 HOH P 100 502 502 HOH HOH . F 3 HOH P 101 503 503 HOH HOH . F 3 HOH P 102 504 504 HOH HOH . F 3 HOH P 103 505 505 HOH HOH . F 3 HOH P 104 506 506 HOH HOH . F 3 HOH P 105 507 507 HOH HOH . F 3 HOH P 106 508 508 HOH HOH . F 3 HOH P 107 509 509 HOH HOH . F 3 HOH P 108 510 510 HOH HOH . F 3 HOH P 109 511 511 HOH HOH . F 3 HOH P 110 512 512 HOH HOH . F 3 HOH P 111 513 513 HOH HOH . F 3 HOH P 112 514 514 HOH HOH . F 3 HOH P 113 515 515 HOH HOH . F 3 HOH P 114 516 516 HOH HOH . F 3 HOH P 115 517 517 HOH HOH . F 3 HOH P 116 518 518 HOH HOH . F 3 HOH P 117 519 519 HOH HOH . F 3 HOH P 118 520 520 HOH HOH . F 3 HOH P 119 521 521 HOH HOH . F 3 HOH P 120 522 522 HOH HOH . F 3 HOH P 121 523 523 HOH HOH . F 3 HOH P 122 525 525 HOH HOH . F 3 HOH P 123 527 527 HOH HOH . F 3 HOH P 124 528 528 HOH HOH . F 3 HOH P 125 530 530 HOH HOH . F 3 HOH P 126 531 531 HOH HOH . F 3 HOH P 127 532 532 HOH HOH . F 3 HOH P 128 533 533 HOH HOH . F 3 HOH P 129 534 534 HOH HOH . F 3 HOH P 130 536 536 HOH HOH . F 3 HOH P 131 537 537 HOH HOH . F 3 HOH P 132 539 539 HOH HOH . F 3 HOH P 133 540 540 HOH HOH . F 3 HOH P 134 542 542 HOH HOH . F 3 HOH P 135 543 543 HOH HOH . F 3 HOH P 136 545 545 HOH HOH . F 3 HOH P 137 546 546 HOH HOH . F 3 HOH P 138 547 547 HOH HOH . F 3 HOH P 139 548 548 HOH HOH . F 3 HOH P 140 549 549 HOH HOH . F 3 HOH P 141 550 550 HOH HOH . F 3 HOH P 142 551 551 HOH HOH . F 3 HOH P 143 552 552 HOH HOH . F 3 HOH P 144 553 553 HOH HOH . F 3 HOH P 145 554 554 HOH HOH . F 3 HOH P 146 555 555 HOH HOH . F 3 HOH P 147 556 556 HOH HOH . F 3 HOH P 148 557 557 HOH HOH . F 3 HOH P 149 558 558 HOH HOH . F 3 HOH P 150 560 560 HOH HOH . F 3 HOH P 151 561 561 HOH HOH . F 3 HOH P 152 563 563 HOH HOH . F 3 HOH P 153 564 564 HOH HOH . F 3 HOH P 154 568 568 HOH HOH . F 3 HOH P 155 570 570 HOH HOH . F 3 HOH P 156 571 571 HOH HOH . F 3 HOH P 157 572 572 HOH HOH . F 3 HOH P 158 573 573 HOH HOH . F 3 HOH P 159 576 576 HOH HOH . F 3 HOH P 160 579 579 HOH HOH . F 3 HOH P 161 580 580 HOH HOH . F 3 HOH P 162 582 582 HOH HOH . F 3 HOH P 163 583 583 HOH HOH . F 3 HOH P 164 584 584 HOH HOH . F 3 HOH P 165 585 585 HOH HOH . F 3 HOH P 166 586 586 HOH HOH . F 3 HOH P 167 587 587 HOH HOH . F 3 HOH P 168 588 588 HOH HOH . F 3 HOH P 169 589 589 HOH HOH . F 3 HOH P 170 590 590 HOH HOH . F 3 HOH P 171 594 594 HOH HOH . F 3 HOH P 172 595 595 HOH HOH . F 3 HOH P 173 596 596 HOH HOH . F 3 HOH P 174 597 597 HOH HOH . F 3 HOH P 175 599 599 HOH HOH . F 3 HOH P 176 600 600 HOH HOH . F 3 HOH P 177 601 601 HOH HOH . F 3 HOH P 178 602 602 HOH HOH . F 3 HOH P 179 604 604 HOH HOH . F 3 HOH P 180 606 606 HOH HOH . F 3 HOH P 181 607 607 HOH HOH . F 3 HOH P 182 608 608 HOH HOH . F 3 HOH P 183 609 609 HOH HOH . F 3 HOH P 184 610 610 HOH HOH . F 3 HOH P 185 611 611 HOH HOH . F 3 HOH P 186 612 612 HOH HOH . F 3 HOH P 187 613 613 HOH HOH . F 3 HOH P 188 614 614 HOH HOH . F 3 HOH P 189 615 615 HOH HOH . F 3 HOH P 190 616 616 HOH HOH . F 3 HOH P 191 617 617 HOH HOH . F 3 HOH P 192 618 618 HOH HOH . F 3 HOH P 193 619 619 HOH HOH . F 3 HOH P 194 620 620 HOH HOH . F 3 HOH P 195 621 621 HOH HOH . F 3 HOH P 196 622 622 HOH HOH . F 3 HOH P 197 623 623 HOH HOH . F 3 HOH P 198 624 624 HOH HOH . F 3 HOH P 199 628 628 HOH HOH . F 3 HOH P 200 630 630 HOH HOH . F 3 HOH P 201 631 631 HOH HOH . F 3 HOH P 202 634 634 HOH HOH . F 3 HOH P 203 635 635 HOH HOH . F 3 HOH P 204 636 636 HOH HOH . F 3 HOH P 205 637 637 HOH HOH . F 3 HOH P 206 638 638 HOH HOH . F 3 HOH P 207 639 639 HOH HOH . F 3 HOH P 208 640 640 HOH HOH . F 3 HOH P 209 641 641 HOH HOH . F 3 HOH P 210 642 642 HOH HOH . F 3 HOH P 211 643 643 HOH HOH . F 3 HOH P 212 644 644 HOH HOH . F 3 HOH P 213 645 645 HOH HOH . F 3 HOH P 214 646 646 HOH HOH . F 3 HOH P 215 648 648 HOH HOH . F 3 HOH P 216 649 649 HOH HOH . F 3 HOH P 217 650 650 HOH HOH . F 3 HOH P 218 652 652 HOH HOH . F 3 HOH P 219 653 653 HOH HOH . F 3 HOH P 220 654 654 HOH HOH . F 3 HOH P 221 655 655 HOH HOH . F 3 HOH P 222 656 656 HOH HOH . F 3 HOH P 223 657 657 HOH HOH . F 3 HOH P 224 658 658 HOH HOH . F 3 HOH P 225 659 659 HOH HOH . F 3 HOH P 226 660 660 HOH HOH . F 3 HOH P 227 661 661 HOH HOH . F 3 HOH P 228 665 665 HOH HOH . F 3 HOH P 229 666 666 HOH HOH . F 3 HOH P 230 667 667 HOH HOH . F 3 HOH P 231 668 668 HOH HOH . F 3 HOH P 232 670 670 HOH HOH . F 3 HOH P 233 671 671 HOH HOH . F 3 HOH P 234 672 672 HOH HOH . F 3 HOH P 235 673 673 HOH HOH . F 3 HOH P 236 674 674 HOH HOH . F 3 HOH P 237 675 675 HOH HOH . F 3 HOH P 238 676 676 HOH HOH . F 3 HOH P 239 680 680 HOH HOH . F 3 HOH P 240 684 684 HOH HOH . F 3 HOH P 241 685 685 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 16.155 _atom_site.Cartn_y 15.129 _atom_site.Cartn_z -0.578 _atom_site.occupancy 0.15 _atom_site.B_iso_or_equiv 16.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 353 _atom_site.auth_asym_id P _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #