data_1ELR # _model_server_result.job_id qI4bVRu-6-R1gKbO9ITGYA _model_server_result.datetime_utc '2024-11-09 02:50:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1elr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 1ELR # _exptl.entry_id 1ELR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.3 _cell.angle_gamma 90 _cell.entry_id 1ELR _cell.length_a 73.28 _cell.length_b 48.27 _cell.length_c 38.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ELR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 0 1_555 B N MET 2 B MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 C NI NI . A NI 200 1_555 A NE2 HIS 26 A HIS 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 C NI NI . A NI 200 1_555 D O HOH . A HOH 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc3 C NI NI . A NI 200 1_555 D O HOH . A HOH 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc4 C NI NI . A NI 200 1_555 D O HOH . A HOH 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc5 C NI NI . A NI 200 1_555 A NZ LYS 104 A LYS 325 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc6 C NI NI . A NI 200 1_555 A NE2 HIS 100 A HIS 321 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ELR _atom_sites.fract_transf_matrix[1][1] 0.013646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00031 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020717 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NI A 1 200 1 NI NI . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 26 26 HOH HOH . D 4 HOH A 25 27 27 HOH HOH . D 4 HOH A 26 28 28 HOH HOH . D 4 HOH A 27 29 29 HOH HOH . D 4 HOH A 28 30 30 HOH HOH . D 4 HOH A 29 31 31 HOH HOH . D 4 HOH A 30 32 32 HOH HOH . D 4 HOH A 31 33 33 HOH HOH . D 4 HOH A 32 35 35 HOH HOH . D 4 HOH A 33 36 36 HOH HOH . D 4 HOH A 34 37 37 HOH HOH . D 4 HOH A 35 39 39 HOH HOH . D 4 HOH A 36 40 40 HOH HOH . D 4 HOH A 37 41 41 HOH HOH . D 4 HOH A 38 42 42 HOH HOH . D 4 HOH A 39 43 43 HOH HOH . D 4 HOH A 40 44 44 HOH HOH . D 4 HOH A 41 45 45 HOH HOH . D 4 HOH A 42 46 46 HOH HOH . D 4 HOH A 43 47 47 HOH HOH . D 4 HOH A 44 48 48 HOH HOH . D 4 HOH A 45 49 49 HOH HOH . D 4 HOH A 46 50 50 HOH HOH . D 4 HOH A 47 51 51 HOH HOH . D 4 HOH A 48 52 52 HOH HOH . D 4 HOH A 49 53 53 HOH HOH . D 4 HOH A 50 54 54 HOH HOH . D 4 HOH A 51 55 55 HOH HOH . D 4 HOH A 52 56 56 HOH HOH . D 4 HOH A 53 57 57 HOH HOH . D 4 HOH A 54 58 58 HOH HOH . D 4 HOH A 55 59 59 HOH HOH . D 4 HOH A 56 60 60 HOH HOH . D 4 HOH A 57 61 61 HOH HOH . D 4 HOH A 58 62 62 HOH HOH . D 4 HOH A 59 63 63 HOH HOH . D 4 HOH A 60 64 64 HOH HOH . D 4 HOH A 61 65 65 HOH HOH . D 4 HOH A 62 66 66 HOH HOH . D 4 HOH A 63 67 67 HOH HOH . D 4 HOH A 64 68 68 HOH HOH . D 4 HOH A 65 69 69 HOH HOH . D 4 HOH A 66 70 70 HOH HOH . D 4 HOH A 67 71 71 HOH HOH . D 4 HOH A 68 72 72 HOH HOH . D 4 HOH A 69 73 73 HOH HOH . D 4 HOH A 70 74 74 HOH HOH . D 4 HOH A 71 75 75 HOH HOH . D 4 HOH A 72 76 76 HOH HOH . D 4 HOH A 73 77 77 HOH HOH . D 4 HOH A 74 79 79 HOH HOH . D 4 HOH A 75 81 81 HOH HOH . D 4 HOH A 76 82 82 HOH HOH . D 4 HOH A 77 83 83 HOH HOH . D 4 HOH A 78 84 84 HOH HOH . D 4 HOH A 79 85 85 HOH HOH . D 4 HOH A 80 86 86 HOH HOH . D 4 HOH A 81 87 87 HOH HOH . D 4 HOH A 82 88 88 HOH HOH . D 4 HOH A 83 90 90 HOH HOH . D 4 HOH A 84 91 91 HOH HOH . D 4 HOH A 85 92 92 HOH HOH . D 4 HOH A 86 93 93 HOH HOH . D 4 HOH A 87 94 94 HOH HOH . D 4 HOH A 88 95 95 HOH HOH . D 4 HOH A 89 96 96 HOH HOH . D 4 HOH A 90 97 97 HOH HOH . D 4 HOH A 91 98 98 HOH HOH . D 4 HOH A 92 99 99 HOH HOH . D 4 HOH A 93 100 100 HOH HOH . D 4 HOH A 94 101 101 HOH HOH . D 4 HOH A 95 102 102 HOH HOH . D 4 HOH A 96 103 103 HOH HOH . D 4 HOH A 97 104 104 HOH HOH . D 4 HOH A 98 106 106 HOH HOH . D 4 HOH A 99 107 107 HOH HOH . D 4 HOH A 100 108 108 HOH HOH . D 4 HOH A 101 109 109 HOH HOH . D 4 HOH A 102 110 110 HOH HOH . D 4 HOH A 103 111 111 HOH HOH . D 4 HOH A 104 112 112 HOH HOH . D 4 HOH A 105 114 114 HOH HOH . D 4 HOH A 106 115 115 HOH HOH . D 4 HOH A 107 116 116 HOH HOH . D 4 HOH A 108 117 117 HOH HOH . D 4 HOH A 109 118 118 HOH HOH . D 4 HOH A 110 119 119 HOH HOH . D 4 HOH A 111 120 120 HOH HOH . D 4 HOH A 112 121 121 HOH HOH . D 4 HOH A 113 122 122 HOH HOH . D 4 HOH A 114 123 123 HOH HOH . D 4 HOH A 115 125 125 HOH HOH . D 4 HOH A 116 128 128 HOH HOH . D 4 HOH A 117 129 129 HOH HOH . D 4 HOH A 118 130 130 HOH HOH . D 4 HOH A 119 131 131 HOH HOH . D 4 HOH A 120 132 132 HOH HOH . D 4 HOH A 121 133 133 HOH HOH . D 4 HOH A 122 134 134 HOH HOH . D 4 HOH A 123 135 135 HOH HOH . D 4 HOH A 124 136 136 HOH HOH . D 4 HOH A 125 137 137 HOH HOH . D 4 HOH A 126 138 138 HOH HOH . D 4 HOH A 127 139 139 HOH HOH . D 4 HOH A 128 140 140 HOH HOH . D 4 HOH A 129 142 142 HOH HOH . D 4 HOH A 130 143 143 HOH HOH . D 4 HOH A 131 144 144 HOH HOH . D 4 HOH A 132 145 145 HOH HOH . D 4 HOH A 133 146 146 HOH HOH . D 4 HOH A 134 148 148 HOH HOH . D 4 HOH A 135 149 149 HOH HOH . D 4 HOH A 136 150 150 HOH HOH . D 4 HOH A 137 151 151 HOH HOH . D 4 HOH A 138 152 152 HOH HOH . E 4 HOH B 1 17 17 HOH HOH . E 4 HOH B 2 25 25 HOH HOH . E 4 HOH B 3 34 34 HOH HOH . E 4 HOH B 4 38 38 HOH HOH . E 4 HOH B 5 78 78 HOH HOH . E 4 HOH B 6 80 80 HOH HOH . E 4 HOH B 7 89 89 HOH HOH . E 4 HOH B 8 105 105 HOH HOH . E 4 HOH B 9 124 124 HOH HOH . E 4 HOH B 10 126 126 HOH HOH . E 4 HOH B 11 127 127 HOH HOH . E 4 HOH B 12 141 141 HOH HOH . E 4 HOH B 13 147 147 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.681 _atom_site.Cartn_y 0.427 _atom_site.Cartn_z 31.546 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 200 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #