data_1ENP # _model_server_result.job_id 1BB-RbMKH6wea8PO5h8ZDw _model_server_result.datetime_utc '2024-11-01 14:30:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1enp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 1ENP # _exptl.entry_id 1ENP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ENP _cell.length_a 70.5 _cell.length_b 70.5 _cell.length_c 117.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ENP _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 117.8 4 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 117.8 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1ENP _atom_sites.fract_transf_matrix[1][1] 0.014184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 501 501 NAD NAH . C 3 HOH A 1 502 1 HOH HOH . C 3 HOH A 2 503 2 HOH HOH . C 3 HOH A 3 504 3 HOH HOH . C 3 HOH A 4 505 4 HOH HOH . C 3 HOH A 5 506 5 HOH HOH . C 3 HOH A 6 507 6 HOH HOH . C 3 HOH A 7 508 7 HOH HOH . C 3 HOH A 8 509 8 HOH HOH . C 3 HOH A 9 510 9 HOH HOH . C 3 HOH A 10 511 10 HOH HOH . C 3 HOH A 11 512 11 HOH HOH . C 3 HOH A 12 513 12 HOH HOH . C 3 HOH A 13 514 13 HOH HOH . C 3 HOH A 14 515 14 HOH HOH . C 3 HOH A 15 516 15 HOH HOH . C 3 HOH A 16 517 16 HOH HOH . C 3 HOH A 17 518 17 HOH HOH . C 3 HOH A 18 519 18 HOH HOH . C 3 HOH A 19 520 19 HOH HOH . C 3 HOH A 20 521 20 HOH HOH . C 3 HOH A 21 522 21 HOH HOH . C 3 HOH A 22 523 22 HOH HOH . C 3 HOH A 23 524 23 HOH HOH . C 3 HOH A 24 525 24 HOH HOH . C 3 HOH A 25 526 25 HOH HOH . C 3 HOH A 26 527 26 HOH HOH . C 3 HOH A 27 528 27 HOH HOH . C 3 HOH A 28 529 28 HOH HOH . C 3 HOH A 29 530 29 HOH HOH . C 3 HOH A 30 531 30 HOH HOH . C 3 HOH A 31 532 31 HOH HOH . C 3 HOH A 32 533 32 HOH HOH . C 3 HOH A 33 534 33 HOH HOH . C 3 HOH A 34 535 34 HOH HOH . C 3 HOH A 35 536 35 HOH HOH . C 3 HOH A 36 537 36 HOH HOH . C 3 HOH A 37 538 37 HOH HOH . C 3 HOH A 38 539 38 HOH HOH . C 3 HOH A 39 540 39 HOH HOH . C 3 HOH A 40 541 40 HOH HOH . C 3 HOH A 41 542 41 HOH HOH . C 3 HOH A 42 543 42 HOH HOH . C 3 HOH A 43 544 43 HOH HOH . C 3 HOH A 44 545 44 HOH HOH . C 3 HOH A 45 546 45 HOH HOH . C 3 HOH A 46 547 46 HOH HOH . C 3 HOH A 47 548 47 HOH HOH . C 3 HOH A 48 549 48 HOH HOH . C 3 HOH A 49 550 49 HOH HOH . C 3 HOH A 50 551 50 HOH HOH . C 3 HOH A 51 552 51 HOH HOH . C 3 HOH A 52 553 52 HOH HOH . C 3 HOH A 53 554 53 HOH HOH . C 3 HOH A 54 555 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . B 2 3.474 19.366 39.459 1 92.04 ? PA NAD 501 A 1 HETATM 2 O O1A NAD . . . B 2 1.986 19.398 39.302 1 51.13 ? O1A NAD 501 A 1 HETATM 3 O O2A NAD . . . B 2 4.334 20.355 38.652 1 63.97 ? O2A NAD 501 A 1 HETATM 4 O O5B NAD . . . B 2 3.92 17.854 39.208 1 71.35 ? O5B NAD 501 A 1 HETATM 5 C C5B NAD . . . B 2 3.882 17.22 37.866 1 66.63 ? C5B NAD 501 A 1 HETATM 6 C C4B NAD . . . B 2 5.144 17.489 37.173 1 23.31 ? C4B NAD 501 A 1 HETATM 7 O O4B NAD . . . B 2 5.47 16.377 36.277 1 51.23 ? O4B NAD 501 A 1 HETATM 8 C C3B NAD . . . B 2 5.214 18.757 36.243 1 19.47 ? C3B NAD 501 A 1 HETATM 9 O O3B NAD . . . B 2 6.552 19.36 36.348 1 51.71 ? O3B NAD 501 A 1 HETATM 10 C C2B NAD . . . B 2 4.916 18.241 34.877 1 100 ? C2B NAD 501 A 1 HETATM 11 O O2B NAD . . . B 2 5.265 19.043 33.817 1 37.24 ? O2B NAD 501 A 1 HETATM 12 C C1B NAD . . . B 2 5.718 16.902 35.039 1 29.15 ? C1B NAD 501 A 1 HETATM 13 N N9A NAD . . . B 2 5.319 15.89 34.129 1 38.32 ? N9A NAD 501 A 1 HETATM 14 C C8A NAD . . . B 2 4.085 15.344 33.87 1 1 ? C8A NAD 501 A 1 HETATM 15 N N7A NAD . . . B 2 4.086 14.365 32.992 1 39.28 ? N7A NAD 501 A 1 HETATM 16 C C5A NAD . . . B 2 5.408 14.182 32.646 1 2.59 ? C5A NAD 501 A 1 HETATM 17 C C6A NAD . . . B 2 6.065 13.191 31.706 1 9.66 ? C6A NAD 501 A 1 HETATM 18 N N6A NAD . . . B 2 5.461 12.255 31.027 1 29.88 ? N6A NAD 501 A 1 HETATM 19 N N1A NAD . . . B 2 7.465 13.361 31.633 1 1.91 ? N1A NAD 501 A 1 HETATM 20 C C2A NAD . . . B 2 8.181 14.227 32.322 1 34.83 ? C2A NAD 501 A 1 HETATM 21 N N3A NAD . . . B 2 7.595 15.184 33.194 1 10.77 ? N3A NAD 501 A 1 HETATM 22 C C4A NAD . . . B 2 6.177 15.122 33.326 1 11.15 ? C4A NAD 501 A 1 HETATM 23 O O3 NAD . . . B 2 3.898 19.537 40.974 1 46.24 ? O3 NAD 501 A 1 HETATM 24 P PN NAD . . . B 2 3.252 19.091 42.415 1 38.45 ? PN NAD 501 A 1 HETATM 25 O O1N NAD . . . B 2 1.979 18.487 42.16 1 76.81 ? O1N NAD 501 A 1 HETATM 26 O O2N NAD . . . B 2 3.419 20.203 43.376 1 100 ? O2N NAD 501 A 1 HETATM 27 O O5D NAD . . . B 2 4.289 17.971 42.911 1 100 ? O5D NAD 501 A 1 HETATM 28 C C5D NAD . . . B 2 4.642 16.839 42.078 1 30.4 ? C5D NAD 501 A 1 HETATM 29 C C4D NAD . . . B 2 4.648 15.549 42.805 1 22.73 ? C4D NAD 501 A 1 HETATM 30 O O4D NAD . . . B 2 4.084 15.824 44.175 1 25.52 ? O4D NAD 501 A 1 HETATM 31 C C3D NAD . . . B 2 3.665 14.385 42.338 1 12.91 ? C3D NAD 501 A 1 HETATM 32 O O3D NAD . . . B 2 4.285 13.26 42.789 1 21.99 ? O3D NAD 501 A 1 HETATM 33 C C2D NAD . . . B 2 2.361 14.652 43.117 1 8.56 ? C2D NAD 501 A 1 HETATM 34 O O2D NAD . . . B 2 1.576 13.522 43.226 1 34.74 ? O2D NAD 501 A 1 HETATM 35 C C1D NAD . . . B 2 3.033 14.947 44.433 1 13.83 ? C1D NAD 501 A 1 HETATM 36 N N1N NAD . . . B 2 2.178 15.533 45.5 1 34.3 ? N1N NAD 501 A 1 HETATM 37 C C2N NAD . . . B 2 1.65 16.807 45.347 1 20.63 ? C2N NAD 501 A 1 HETATM 38 C C3N NAD . . . B 2 0.776 17.148 46.318 1 100 ? C3N NAD 501 A 1 HETATM 39 C C7N NAD . . . B 2 0.2 18.613 46.008 1 8.98 ? C7N NAD 501 A 1 HETATM 40 O O7N NAD . . . B 2 -0.605 19.111 46.818 1 100 ? O7N NAD 501 A 1 HETATM 41 N N7N NAD . . . B 2 0.695 19.252 44.864 1 54.82 ? N7N NAD 501 A 1 HETATM 42 C C4N NAD . . . B 2 0.385 16.376 47.429 1 10.5 ? C4N NAD 501 A 1 HETATM 43 C C5N NAD . . . B 2 1.029 15.096 47.472 1 47.36 ? C5N NAD 501 A 1 HETATM 44 C C6N NAD . . . B 2 1.912 14.676 46.509 1 8.26 ? C6N NAD 501 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #