data_1EP5 # _model_server_result.job_id 0TsWqttVE5QTXDmLAmEILg _model_server_result.datetime_utc '2025-02-05 07:46:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ep5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":941}' # _entry.id 1EP5 # _exptl.entry_id 1EP5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.055 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UREA _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EP5 _cell.length_a 69.33 _cell.length_b 75.18 _cell.length_c 94.66 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C H4 N2 O' _chem_comp.formula_weight 60.055 _chem_comp.id URE _chem_comp.mon_nstd_flag . _chem_comp.name UREA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O URE doub 362 n n C N1 URE sing 363 n n C N2 URE sing 364 n n N1 HN11 URE sing 365 n n N1 HN12 URE sing 366 n n N2 HN21 URE sing 367 n n N2 HN22 URE sing 368 n n # _atom_sites.entry_id 1EP5 _atom_sites.fract_transf_matrix[1][1] 0.01442 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0133 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 URE B 1 940 940 URE URE . E 2 URE B 1 941 941 URE URE . F 2 URE B 1 942 942 URE URE . G 2 URE B 1 945 945 URE URE . H 2 URE B 1 946 946 URE URE . I 3 SO4 A 1 759 759 SO4 SO4 . J 3 SO4 A 1 859 859 SO4 SO4 . K 2 URE A 1 943 943 URE URE . L 2 URE A 1 944 944 URE URE . M 4 HOH B 1 947 101 HOH WAT . M 4 HOH B 2 948 105 HOH WAT . M 4 HOH B 3 949 107 HOH WAT . M 4 HOH B 4 950 110 HOH WAT . M 4 HOH B 5 951 113 HOH WAT . M 4 HOH B 6 952 114 HOH WAT . M 4 HOH B 7 953 117 HOH WAT . M 4 HOH B 8 954 118 HOH WAT . M 4 HOH B 9 955 120 HOH WAT . M 4 HOH B 10 956 122 HOH WAT . M 4 HOH B 11 957 123 HOH WAT . M 4 HOH B 12 958 127 HOH WAT . M 4 HOH B 13 959 130 HOH WAT . M 4 HOH B 14 960 132 HOH WAT . M 4 HOH B 15 961 135 HOH WAT . M 4 HOH B 16 962 136 HOH WAT . M 4 HOH B 17 963 142 HOH WAT . M 4 HOH B 18 964 146 HOH WAT . M 4 HOH B 19 965 150 HOH WAT . M 4 HOH B 20 966 151 HOH WAT . M 4 HOH B 21 967 152 HOH WAT . M 4 HOH B 22 968 153 HOH WAT . M 4 HOH B 23 969 154 HOH WAT . M 4 HOH B 24 970 160 HOH WAT . M 4 HOH B 25 971 168 HOH WAT . M 4 HOH B 26 972 169 HOH WAT . M 4 HOH B 27 973 172 HOH WAT . M 4 HOH B 28 974 176 HOH WAT . M 4 HOH B 29 975 177 HOH WAT . M 4 HOH B 30 976 180 HOH WAT . M 4 HOH B 31 977 181 HOH WAT . M 4 HOH B 32 978 186 HOH WAT . M 4 HOH B 33 979 191 HOH WAT . M 4 HOH B 34 980 192 HOH WAT . M 4 HOH B 35 981 203 HOH WAT . M 4 HOH B 36 982 207 HOH WAT . M 4 HOH B 37 983 211 HOH WAT . M 4 HOH B 38 984 212 HOH WAT . M 4 HOH B 39 985 219 HOH WAT . M 4 HOH B 40 986 222 HOH WAT . M 4 HOH B 41 987 223 HOH WAT . M 4 HOH B 42 988 224 HOH WAT . M 4 HOH B 43 989 227 HOH WAT . M 4 HOH B 44 990 233 HOH WAT . M 4 HOH B 45 991 234 HOH WAT . M 4 HOH B 46 992 235 HOH WAT . M 4 HOH B 47 993 237 HOH WAT . M 4 HOH B 48 994 238 HOH WAT . M 4 HOH B 49 995 239 HOH WAT . M 4 HOH B 50 996 242 HOH WAT . M 4 HOH B 51 997 243 HOH WAT . M 4 HOH B 52 998 244 HOH WAT . M 4 HOH B 53 999 246 HOH WAT . M 4 HOH B 54 1000 247 HOH WAT . M 4 HOH B 55 1001 248 HOH WAT . M 4 HOH B 56 1002 250 HOH WAT . M 4 HOH B 57 1003 254 HOH WAT . M 4 HOH B 58 1004 255 HOH WAT . M 4 HOH B 59 1005 258 HOH WAT . M 4 HOH B 60 1006 260 HOH WAT . M 4 HOH B 61 1007 273 HOH WAT . M 4 HOH B 62 1008 275 HOH WAT . M 4 HOH B 63 1009 277 HOH WAT . N 4 HOH A 1 945 103 HOH WAT . N 4 HOH A 2 946 104 HOH WAT . N 4 HOH A 3 947 106 HOH WAT . N 4 HOH A 4 948 108 HOH WAT . N 4 HOH A 5 949 111 HOH WAT . N 4 HOH A 6 950 112 HOH WAT . N 4 HOH A 7 951 115 HOH WAT . N 4 HOH A 8 952 119 HOH WAT . N 4 HOH A 9 953 121 HOH WAT . N 4 HOH A 10 954 124 HOH WAT . N 4 HOH A 11 955 125 HOH WAT . N 4 HOH A 12 956 126 HOH WAT . N 4 HOH A 13 957 128 HOH WAT . N 4 HOH A 14 958 129 HOH WAT . N 4 HOH A 15 959 131 HOH WAT . N 4 HOH A 16 960 133 HOH WAT . N 4 HOH A 17 961 134 HOH WAT . N 4 HOH A 18 962 137 HOH WAT . N 4 HOH A 19 963 139 HOH WAT . N 4 HOH A 20 964 143 HOH WAT . N 4 HOH A 21 965 144 HOH WAT . N 4 HOH A 22 966 148 HOH WAT . N 4 HOH A 23 967 149 HOH WAT . N 4 HOH A 24 968 155 HOH WAT . N 4 HOH A 25 969 156 HOH WAT . N 4 HOH A 26 970 157 HOH WAT . N 4 HOH A 27 971 158 HOH WAT . N 4 HOH A 28 972 159 HOH WAT . N 4 HOH A 29 973 163 HOH WAT . N 4 HOH A 30 974 164 HOH WAT . N 4 HOH A 31 975 165 HOH WAT . N 4 HOH A 32 976 166 HOH WAT . N 4 HOH A 33 977 167 HOH WAT . N 4 HOH A 34 978 170 HOH WAT . N 4 HOH A 35 979 171 HOH WAT . N 4 HOH A 36 980 174 HOH WAT . N 4 HOH A 37 981 175 HOH WAT . N 4 HOH A 38 982 178 HOH WAT . N 4 HOH A 39 983 179 HOH WAT . N 4 HOH A 40 984 183 HOH WAT . N 4 HOH A 41 985 184 HOH WAT . N 4 HOH A 42 986 185 HOH WAT . N 4 HOH A 43 987 187 HOH WAT . N 4 HOH A 44 988 188 HOH WAT . N 4 HOH A 45 989 189 HOH WAT . N 4 HOH A 46 990 190 HOH WAT . N 4 HOH A 47 991 194 HOH WAT . N 4 HOH A 48 992 196 HOH WAT . N 4 HOH A 49 993 198 HOH WAT . N 4 HOH A 50 994 199 HOH WAT . N 4 HOH A 51 995 201 HOH WAT . N 4 HOH A 52 996 202 HOH WAT . N 4 HOH A 53 997 205 HOH WAT . N 4 HOH A 54 998 206 HOH WAT . N 4 HOH A 55 999 208 HOH WAT . N 4 HOH A 56 1000 210 HOH WAT . N 4 HOH A 57 1001 213 HOH WAT . N 4 HOH A 58 1002 214 HOH WAT . N 4 HOH A 59 1003 215 HOH WAT . N 4 HOH A 60 1004 216 HOH WAT . N 4 HOH A 61 1005 220 HOH WAT . N 4 HOH A 62 1006 221 HOH WAT . N 4 HOH A 63 1007 225 HOH WAT . N 4 HOH A 64 1008 229 HOH WAT . N 4 HOH A 65 1009 230 HOH WAT . N 4 HOH A 66 1010 231 HOH WAT . N 4 HOH A 67 1011 236 HOH WAT . N 4 HOH A 68 1012 245 HOH WAT . N 4 HOH A 69 1013 249 HOH WAT . N 4 HOH A 70 1014 251 HOH WAT . N 4 HOH A 71 1015 257 HOH WAT . N 4 HOH A 72 1016 259 HOH WAT . N 4 HOH A 73 1017 261 HOH WAT . N 4 HOH A 74 1018 263 HOH WAT . N 4 HOH A 75 1019 264 HOH WAT . N 4 HOH A 76 1020 265 HOH WAT . N 4 HOH A 77 1021 266 HOH WAT . N 4 HOH A 78 1022 267 HOH WAT . N 4 HOH A 79 1023 269 HOH WAT . N 4 HOH A 80 1024 271 HOH WAT . N 4 HOH A 81 1025 272 HOH WAT . N 4 HOH A 82 1026 282 HOH WAT . N 4 HOH A 83 1027 284 HOH WAT . N 4 HOH A 84 1028 287 HOH WAT . N 4 HOH A 85 1029 288 HOH WAT . O 4 HOH C 1 276 102 HOH WAT . O 4 HOH C 2 277 109 HOH WAT . O 4 HOH C 3 278 116 HOH WAT . O 4 HOH C 4 279 138 HOH WAT . O 4 HOH C 5 280 140 HOH WAT . O 4 HOH C 6 281 141 HOH WAT . O 4 HOH C 7 282 145 HOH WAT . O 4 HOH C 8 283 147 HOH WAT . O 4 HOH C 9 284 161 HOH WAT . O 4 HOH C 10 285 162 HOH WAT . O 4 HOH C 11 286 173 HOH WAT . O 4 HOH C 12 287 182 HOH WAT . O 4 HOH C 13 288 193 HOH WAT . O 4 HOH C 14 289 195 HOH WAT . O 4 HOH C 15 290 197 HOH WAT . O 4 HOH C 16 291 200 HOH WAT . O 4 HOH C 17 292 209 HOH WAT . O 4 HOH C 18 293 217 HOH WAT . O 4 HOH C 19 294 218 HOH WAT . O 4 HOH C 20 295 226 HOH WAT . O 4 HOH C 21 296 228 HOH WAT . O 4 HOH C 22 297 232 HOH WAT . O 4 HOH C 23 298 240 HOH WAT . O 4 HOH C 24 299 241 HOH WAT . O 4 HOH C 25 300 252 HOH WAT . O 4 HOH C 26 301 256 HOH WAT . O 4 HOH C 27 302 262 HOH WAT . O 4 HOH C 28 303 268 HOH WAT . O 4 HOH C 29 304 278 HOH WAT . O 4 HOH C 30 305 285 HOH WAT . O 4 HOH C 31 306 286 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C URE . . . E 2 39.603 7.695 30.127 1 51.82 ? C URE 941 B 1 HETATM 2 O O URE . . . E 2 39.104 7.75 31.294 1 51.74 ? O URE 941 B 1 HETATM 3 N N1 URE . . . E 2 39.142 8.347 29.054 1 50.87 ? N1 URE 941 B 1 HETATM 4 N N2 URE . . . E 2 40.678 6.893 30.03 1 51.91 ? N2 URE 941 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #