data_1EQU
#
_model_server_result.job_id            ApSR5MG7taz-b3G-xUITAw 
_model_server_result.datetime_utc      '2025-03-04 14:16:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1equ 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":328}' 
#
_entry.id    1EQU 
#
_exptl.entry_id    1EQU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1EQU 
_cell.length_a            44.02 
_cell.length_b            114.16 
_cell.length_c            114.84 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1EQU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 280 n n 
PA O2A NAP sing 281 n n 
PA O5B NAP sing 282 n n 
PA O3 NAP sing 283 n n 
O2A HOA2 NAP sing 284 n n 
O5B C5B NAP sing 285 n n 
C5B C4B NAP sing 286 n n 
C5B H51A NAP sing 287 n n 
C5B H52A NAP sing 288 n n 
C4B O4B NAP sing 289 n n 
C4B C3B NAP sing 290 n n 
C4B H4B NAP sing 291 n n 
O4B C1B NAP sing 292 n n 
C3B O3B NAP sing 293 n n 
C3B C2B NAP sing 294 n n 
C3B H3B NAP sing 295 n n 
O3B HO3A NAP sing 296 n n 
C2B O2B NAP sing 297 n n 
C2B C1B NAP sing 298 n n 
C2B H2B NAP sing 299 n n 
O2B P2B NAP sing 300 n n 
C1B N9A NAP sing 301 n n 
C1B H1B NAP sing 302 n n 
N9A C8A NAP sing 303 n y 
N9A C4A NAP sing 304 n y 
C8A N7A NAP doub 305 n y 
C8A H8A NAP sing 306 n n 
N7A C5A NAP sing 307 n y 
C5A C6A NAP sing 308 n y 
C5A C4A NAP doub 309 n y 
C6A N6A NAP sing 310 n n 
C6A N1A NAP doub 311 n y 
N6A H61A NAP sing 312 n n 
N6A H62A NAP sing 313 n n 
N1A C2A NAP sing 314 n y 
C2A N3A NAP doub 315 n y 
C2A H2A NAP sing 316 n n 
N3A C4A NAP sing 317 n y 
O3 PN NAP sing 318 n n 
PN O1N NAP doub 319 n n 
PN O2N NAP sing 320 n n 
PN O5D NAP sing 321 n n 
O5D C5D NAP sing 322 n n 
C5D C4D NAP sing 323 n n 
C5D H51N NAP sing 324 n n 
C5D H52N NAP sing 325 n n 
C4D O4D NAP sing 326 n n 
C4D C3D NAP sing 327 n n 
C4D H4D NAP sing 328 n n 
O4D C1D NAP sing 329 n n 
C3D O3D NAP sing 330 n n 
C3D C2D NAP sing 331 n n 
C3D H3D NAP sing 332 n n 
O3D HO3N NAP sing 333 n n 
C2D O2D NAP sing 334 n n 
C2D C1D NAP sing 335 n n 
C2D H2D NAP sing 336 n n 
O2D HO2N NAP sing 337 n n 
C1D N1N NAP sing 338 n n 
C1D H1D NAP sing 339 n n 
N1N C2N NAP sing 340 n y 
N1N C6N NAP doub 341 n y 
C2N C3N NAP doub 342 n y 
C2N H2N NAP sing 343 n n 
C3N C7N NAP sing 344 n n 
C3N C4N NAP sing 345 n y 
C7N O7N NAP doub 346 n n 
C7N N7N NAP sing 347 n n 
N7N H71N NAP sing 348 n n 
N7N H72N NAP sing 349 n n 
C4N C5N NAP doub 350 n y 
C4N H4N NAP sing 351 n n 
C5N C6N NAP sing 352 n y 
C5N H5N NAP sing 353 n n 
C6N H6N NAP sing 354 n n 
P2B O1X NAP doub 355 n n 
P2B O2X NAP sing 356 n n 
P2B O3X NAP sing 357 n n 
O2X HOP2 NAP sing 358 n n 
O3X HOP3 NAP sing 359 n n 
#
_atom_sites.entry_id                     1EQU 
_atom_sites.fract_transf_matrix[1][1]    0.022717 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00876 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008708 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 328 285 NAP NDP . 
D 3 EQI A 1 329 286 EQI EQU . 
E 2 NAP B 1 328 287 NAP NDP . 
F 4 HOH A 1 330 1 HOH HOH . 
F 4 HOH A 2 331 2 HOH HOH . 
F 4 HOH A 3 332 3 HOH HOH . 
F 4 HOH A 4 333 7 HOH HOH . 
F 4 HOH A 5 334 9 HOH HOH . 
F 4 HOH A 6 335 10 HOH HOH . 
F 4 HOH A 7 336 11 HOH HOH . 
F 4 HOH A 8 337 12 HOH HOH . 
F 4 HOH A 9 338 13 HOH HOH . 
F 4 HOH A 10 339 16 HOH HOH . 
F 4 HOH A 11 340 17 HOH HOH . 
F 4 HOH A 12 341 18 HOH HOH . 
G 4 HOH B 1 329 4 HOH HOH . 
G 4 HOH B 2 330 5 HOH HOH . 
G 4 HOH B 3 331 6 HOH HOH . 
G 4 HOH B 4 332 8 HOH HOH . 
G 4 HOH B 5 333 14 HOH HOH . 
G 4 HOH B 6 334 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . C 2 21.203 28.059 43.301 1 13.99 ? PA NAP 328 A 1 
HETATM 2 O O1A NAP . . . C 2 21.978 27.497 42.19 1 15.69 ? O1A NAP 328 A 1 
HETATM 3 O O2A NAP . . . C 2 21.557 29.429 43.619 1 12.78 ? O2A NAP 328 A 1 
HETATM 4 O O5B NAP . . . C 2 21.481 27.117 44.515 1 9.99 ? O5B NAP 328 A 1 
HETATM 5 C C5B NAP . . . C 2 22.298 25.882 44.375 1 10.95 ? C5B NAP 328 A 1 
HETATM 6 C C4B NAP . . . C 2 23.547 25.884 43.799 1 13.44 ? C4B NAP 328 A 1 
HETATM 7 O O4B NAP . . . C 2 24.165 24.575 43.601 1 13.75 ? O4B NAP 328 A 1 
HETATM 8 C C3B NAP . . . C 2 24.553 26.706 44.528 1 14.81 ? C3B NAP 328 A 1 
HETATM 9 O O3B NAP . . . C 2 24.378 28.093 44.613 1 15.44 ? O3B NAP 328 A 1 
HETATM 10 C C2B NAP . . . C 2 25.723 25.841 44.853 1 14.5 ? C2B NAP 328 A 1 
HETATM 11 O O2B NAP . . . C 2 26.983 26.578 44.759 1 11.56 ? O2B NAP 328 A 1 
HETATM 12 C C1B NAP . . . C 2 25.571 24.693 43.897 1 11.93 ? C1B NAP 328 A 1 
HETATM 13 N N9A NAP . . . C 2 26.444 24.076 42.872 1 14.84 ? N9A NAP 328 A 1 
HETATM 14 C C8A NAP . . . C 2 26.658 24.585 41.625 1 13.66 ? C8A NAP 328 A 1 
HETATM 15 N N7A NAP . . . C 2 27.566 23.931 40.917 1 11.92 ? N7A NAP 328 A 1 
HETATM 16 C C5A NAP . . . C 2 28.052 23.023 41.794 1 12.14 ? C5A NAP 328 A 1 
HETATM 17 C C6A NAP . . . C 2 29.186 22.004 41.724 1 12.07 ? C6A NAP 328 A 1 
HETATM 18 N N6A NAP . . . C 2 29.988 21.813 40.664 1 11.05 ? N6A NAP 328 A 1 
HETATM 19 N N1A NAP . . . C 2 29.319 21.219 42.831 1 11.55 ? N1A NAP 328 A 1 
HETATM 20 C C2A NAP . . . C 2 28.545 21.385 43.906 1 10.06 ? C2A NAP 328 A 1 
HETATM 21 N N3A NAP . . . C 2 27.593 22.304 44.036 1 11.35 ? N3A NAP 328 A 1 
HETATM 22 C C4A NAP . . . C 2 27.34 23.103 42.984 1 10.01 ? C4A NAP 328 A 1 
HETATM 23 O O3 NAP . . . C 2 19.694 28.004 43.262 1 14.57 ? O3 NAP 328 A 1 
HETATM 24 P PN NAP . . . C 2 18.4 27.109 43.468 1 13.76 ? PN NAP 328 A 1 
HETATM 25 O O1N NAP . . . C 2 17.198 27.626 42.78 1 15.73 ? O1N NAP 328 A 1 
HETATM 26 O O2N NAP . . . C 2 18.4 26.512 44.851 1 14.01 ? O2N NAP 328 A 1 
HETATM 27 O O5D NAP . . . C 2 18.729 25.832 42.509 1 12.59 ? O5D NAP 328 A 1 
HETATM 28 C C5D NAP . . . C 2 19.728 24.945 42.978 1 9.61 ? C5D NAP 328 A 1 
HETATM 29 C C4D NAP . . . C 2 19.569 23.525 42.536 1 9.89 ? C4D NAP 328 A 1 
HETATM 30 O O4D NAP . . . C 2 18.352 22.88 43.074 1 9.77 ? O4D NAP 328 A 1 
HETATM 31 C C3D NAP . . . C 2 19.65 23.018 41.094 1 10.09 ? C3D NAP 328 A 1 
HETATM 32 O O3D NAP . . . C 2 20.552 23.535 40.074 1 10.24 ? O3D NAP 328 A 1 
HETATM 33 C C2D NAP . . . C 2 18.265 22.745 40.532 1 10.53 ? C2D NAP 328 A 1 
HETATM 34 O O2D NAP . . . C 2 17.825 23.435 39.349 1 14.06 ? O2D NAP 328 A 1 
HETATM 35 C C1D NAP . . . C 2 17.521 22.631 41.865 1 10.14 ? C1D NAP 328 A 1 
HETATM 36 N N1N NAP . . . C 2 16.197 23.214 41.561 1 10.67 ? N1N NAP 328 A 1 
HETATM 37 C C2N NAP . . . C 2 16.226 24.657 41.647 1 10.79 ? C2N NAP 328 A 1 
HETATM 38 C C3N NAP . . . C 2 15.347 25.36 40.826 1 11.7 ? C3N NAP 328 A 1 
HETATM 39 C C7N NAP . . . C 2 15.183 26.859 40.918 1 12.03 ? C7N NAP 328 A 1 
HETATM 40 O O7N NAP . . . C 2 14.967 27.561 39.885 1 12.93 ? O7N NAP 328 A 1 
HETATM 41 N N7N NAP . . . C 2 14.911 26.904 42.213 1 13.4 ? N7N NAP 328 A 1 
HETATM 42 C C4N NAP . . . C 2 14.499 24.739 39.888 1 13.3 ? C4N NAP 328 A 1 
HETATM 43 C C5N NAP . . . C 2 14.515 23.33 39.773 1 9.23 ? C5N NAP 328 A 1 
HETATM 44 C C6N NAP . . . C 2 15.338 22.579 40.606 1 8.35 ? C6N NAP 328 A 1 
HETATM 45 P P2B NAP . . . C 2 27.761 27.584 43.747 1 12.62 ? P2B NAP 328 A 1 
HETATM 46 O O1X NAP . . . C 2 29.251 27.635 44.39 1 15.18 ? O1X NAP 328 A 1 
HETATM 47 O O2X NAP . . . C 2 27.021 28.862 43.695 1 11 ? O2X NAP 328 A 1 
HETATM 48 O O3X NAP . . . C 2 27.871 26.985 42.349 1 15.52 ? O3X NAP 328 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           557 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#