data_1ERB # _model_server_result.job_id 5RsTD-fh2rpIdF_uJqD3tg _model_server_result.datetime_utc '2024-12-26 09:51:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1erb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":184}' # _entry.id 1ERB # _exptl.entry_id 1ERB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.504 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-ETHYL RETINAMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ERB _cell.length_a 46.27 _cell.length_b 49.11 _cell.length_c 76.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ERB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf2 A SG CYS 70 A CYS 70 1_555 A SG CYS 174 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 120 A CYS 120 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? # _chem_comp.formula 'C22 H33 N O' _chem_comp.formula_weight 327.504 _chem_comp.id ETR _chem_comp.mon_nstd_flag . _chem_comp.name 'N-ETHYL RETINAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ETR sing 83 n n C1 C6 ETR sing 84 n n C1 C16 ETR sing 85 n n C1 C17 ETR sing 86 n n C2 C3 ETR sing 87 n n C2 H21 ETR sing 88 n n C2 H22 ETR sing 89 n n C3 C4 ETR sing 90 n n C3 H31 ETR sing 91 n n C3 H32 ETR sing 92 n n C4 C5 ETR sing 93 n n C4 H41 ETR sing 94 n n C4 H42 ETR sing 95 n n C5 C6 ETR doub 96 n n C5 C18 ETR sing 97 n n C6 C7 ETR sing 98 n n C7 C8 ETR doub 99 e n C7 H7 ETR sing 100 n n C8 C9 ETR sing 101 n n C8 H8 ETR sing 102 n n C9 C10 ETR doub 103 e n C9 C19 ETR sing 104 n n C10 C11 ETR sing 105 n n C10 H10 ETR sing 106 n n C11 C12 ETR doub 107 e n C11 H11 ETR sing 108 n n C12 C13 ETR sing 109 n n C12 H12 ETR sing 110 n n C13 C14 ETR doub 111 e n C13 C20 ETR sing 112 n n C14 C15 ETR sing 113 n n C14 H14 ETR sing 114 n n C15 O ETR doub 115 n n C15 N ETR sing 116 n n N C21 ETR sing 117 n n N HN ETR sing 118 n n C16 H161 ETR sing 119 n n C16 H162 ETR sing 120 n n C16 H163 ETR sing 121 n n C17 H171 ETR sing 122 n n C17 H172 ETR sing 123 n n C17 H173 ETR sing 124 n n C18 H181 ETR sing 125 n n C18 H182 ETR sing 126 n n C18 H183 ETR sing 127 n n C19 H191 ETR sing 128 n n C19 H192 ETR sing 129 n n C19 H193 ETR sing 130 n n C20 H201 ETR sing 131 n n C20 H202 ETR sing 132 n n C20 H203 ETR sing 133 n n C21 C22 ETR sing 134 n n C21 H211 ETR sing 135 n n C21 H212 ETR sing 136 n n C22 H221 ETR sing 137 n n C22 H222 ETR sing 138 n n C22 H223 ETR sing 139 n n # _atom_sites.entry_id 1ERB _atom_sites.fract_transf_matrix[1][1] 0.021612 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013087 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ETR A 1 184 176 ETR ETR . C 3 HOH A 1 185 177 HOH HOH . C 3 HOH A 2 186 178 HOH HOH . C 3 HOH A 3 187 179 HOH HOH . C 3 HOH A 4 188 180 HOH HOH . C 3 HOH A 5 189 181 HOH HOH . C 3 HOH A 6 190 182 HOH HOH . C 3 HOH A 7 191 183 HOH HOH . C 3 HOH A 8 192 184 HOH HOH . C 3 HOH A 9 193 185 HOH HOH . C 3 HOH A 10 194 186 HOH HOH . C 3 HOH A 11 195 187 HOH HOH . C 3 HOH A 12 196 188 HOH HOH . C 3 HOH A 13 197 189 HOH HOH . C 3 HOH A 14 198 190 HOH HOH . C 3 HOH A 15 199 191 HOH HOH . C 3 HOH A 16 200 192 HOH HOH . C 3 HOH A 17 201 193 HOH HOH . C 3 HOH A 18 202 194 HOH HOH . C 3 HOH A 19 203 195 HOH HOH . C 3 HOH A 20 204 196 HOH HOH . C 3 HOH A 21 205 197 HOH HOH . C 3 HOH A 22 206 198 HOH HOH . C 3 HOH A 23 207 199 HOH HOH . C 3 HOH A 24 208 200 HOH HOH . C 3 HOH A 25 209 201 HOH HOH . C 3 HOH A 26 210 202 HOH HOH . C 3 HOH A 27 211 203 HOH HOH . C 3 HOH A 28 212 204 HOH HOH . C 3 HOH A 29 213 205 HOH HOH . C 3 HOH A 30 214 206 HOH HOH . C 3 HOH A 31 215 207 HOH HOH . C 3 HOH A 32 216 208 HOH HOH . C 3 HOH A 33 217 209 HOH HOH . C 3 HOH A 34 218 210 HOH HOH . C 3 HOH A 35 219 211 HOH HOH . C 3 HOH A 36 220 212 HOH HOH . C 3 HOH A 37 221 213 HOH HOH . C 3 HOH A 38 222 214 HOH HOH . C 3 HOH A 39 223 215 HOH HOH . C 3 HOH A 40 224 216 HOH HOH . C 3 HOH A 41 225 217 HOH HOH . C 3 HOH A 42 226 218 HOH HOH . C 3 HOH A 43 227 219 HOH HOH . C 3 HOH A 44 228 220 HOH HOH . C 3 HOH A 45 229 221 HOH HOH . C 3 HOH A 46 230 222 HOH HOH . C 3 HOH A 47 231 223 HOH HOH . C 3 HOH A 48 232 224 HOH HOH . C 3 HOH A 49 233 225 HOH HOH . C 3 HOH A 50 234 226 HOH HOH . C 3 HOH A 51 235 227 HOH HOH . C 3 HOH A 52 236 228 HOH HOH . C 3 HOH A 53 237 229 HOH HOH . C 3 HOH A 54 238 230 HOH HOH . C 3 HOH A 55 239 231 HOH HOH . C 3 HOH A 56 240 232 HOH HOH . C 3 HOH A 57 241 233 HOH HOH . C 3 HOH A 58 242 234 HOH HOH . C 3 HOH A 59 243 235 HOH HOH . C 3 HOH A 60 244 236 HOH HOH . C 3 HOH A 61 245 237 HOH HOH . C 3 HOH A 62 246 238 HOH HOH . C 3 HOH A 63 247 239 HOH HOH . C 3 HOH A 64 248 240 HOH HOH . C 3 HOH A 65 249 241 HOH HOH . C 3 HOH A 66 250 242 HOH HOH . C 3 HOH A 67 251 243 HOH HOH . C 3 HOH A 68 252 244 HOH HOH . C 3 HOH A 69 253 245 HOH HOH . C 3 HOH A 70 254 246 HOH HOH . C 3 HOH A 71 255 247 HOH HOH . C 3 HOH A 72 256 248 HOH HOH . C 3 HOH A 73 257 249 HOH HOH . C 3 HOH A 74 258 250 HOH HOH . C 3 HOH A 75 259 251 HOH HOH . C 3 HOH A 76 260 252 HOH HOH . C 3 HOH A 77 261 253 HOH HOH . C 3 HOH A 78 262 254 HOH HOH . C 3 HOH A 79 263 255 HOH HOH . C 3 HOH A 80 264 256 HOH HOH . C 3 HOH A 81 265 257 HOH HOH . C 3 HOH A 82 266 258 HOH HOH . C 3 HOH A 83 267 259 HOH HOH . C 3 HOH A 84 268 260 HOH HOH . C 3 HOH A 85 269 261 HOH HOH . C 3 HOH A 86 270 262 HOH HOH . C 3 HOH A 87 271 263 HOH HOH . C 3 HOH A 88 272 264 HOH HOH . C 3 HOH A 89 273 265 HOH HOH . C 3 HOH A 90 274 266 HOH HOH . C 3 HOH A 91 275 267 HOH HOH . C 3 HOH A 92 276 268 HOH HOH . C 3 HOH A 93 277 269 HOH HOH . C 3 HOH A 94 278 270 HOH HOH . C 3 HOH A 95 279 271 HOH HOH . C 3 HOH A 96 280 272 HOH HOH . C 3 HOH A 97 281 273 HOH HOH . C 3 HOH A 98 282 274 HOH HOH . C 3 HOH A 99 283 275 HOH HOH . C 3 HOH A 100 284 276 HOH HOH . C 3 HOH A 101 285 277 HOH HOH . C 3 HOH A 102 286 278 HOH HOH . C 3 HOH A 103 287 279 HOH HOH . C 3 HOH A 104 288 280 HOH HOH . C 3 HOH A 105 289 281 HOH HOH . C 3 HOH A 106 290 282 HOH HOH . C 3 HOH A 107 291 283 HOH HOH . C 3 HOH A 108 292 284 HOH HOH . C 3 HOH A 109 293 285 HOH HOH . C 3 HOH A 110 294 286 HOH HOH . C 3 HOH A 111 295 287 HOH HOH . C 3 HOH A 112 296 288 HOH HOH . C 3 HOH A 113 297 289 HOH HOH . C 3 HOH A 114 298 290 HOH HOH . C 3 HOH A 115 299 291 HOH HOH . C 3 HOH A 116 300 292 HOH HOH . C 3 HOH A 117 301 293 HOH HOH . C 3 HOH A 118 302 294 HOH HOH . C 3 HOH A 119 303 295 HOH HOH . C 3 HOH A 120 304 296 HOH HOH . C 3 HOH A 121 305 297 HOH HOH . C 3 HOH A 122 306 298 HOH HOH . C 3 HOH A 123 307 299 HOH HOH . C 3 HOH A 124 308 300 HOH HOH . C 3 HOH A 125 309 301 HOH HOH . C 3 HOH A 126 310 302 HOH HOH . C 3 HOH A 127 311 303 HOH HOH . C 3 HOH A 128 312 304 HOH HOH . C 3 HOH A 129 313 306 HOH HOH . C 3 HOH A 130 314 307 HOH HOH . C 3 HOH A 131 315 308 HOH HOH . C 3 HOH A 132 316 309 HOH HOH . C 3 HOH A 133 317 310 HOH HOH . C 3 HOH A 134 318 311 HOH HOH . C 3 HOH A 135 319 312 HOH HOH . C 3 HOH A 136 320 313 HOH HOH . C 3 HOH A 137 321 314 HOH HOH . C 3 HOH A 138 322 315 HOH HOH . C 3 HOH A 139 323 316 HOH HOH . C 3 HOH A 140 324 317 HOH HOH . C 3 HOH A 141 325 318 HOH HOH . C 3 HOH A 142 326 319 HOH HOH . C 3 HOH A 143 327 320 HOH HOH . C 3 HOH A 144 328 321 HOH HOH . C 3 HOH A 145 329 322 HOH HOH . C 3 HOH A 146 330 323 HOH HOH . C 3 HOH A 147 331 324 HOH HOH . C 3 HOH A 148 332 325 HOH HOH . C 3 HOH A 149 333 326 HOH HOH . C 3 HOH A 150 334 327 HOH HOH . C 3 HOH A 151 335 328 HOH HOH . C 3 HOH A 152 336 329 HOH HOH . C 3 HOH A 153 337 330 HOH HOH . C 3 HOH A 154 338 331 HOH HOH . C 3 HOH A 155 339 332 HOH HOH . C 3 HOH A 156 340 333 HOH HOH . C 3 HOH A 157 341 334 HOH HOH . C 3 HOH A 158 342 335 HOH HOH . C 3 HOH A 159 343 336 HOH HOH . C 3 HOH A 160 344 337 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ETR . . . B 2 30.035 21.496 45.351 1 27.62 ? C1 ETR 184 A 1 HETATM 2 C C2 ETR . . . B 2 29.536 21.549 43.9 1 23.25 ? C2 ETR 184 A 1 HETATM 3 C C3 ETR . . . B 2 30 20.384 43.034 1 30.99 ? C3 ETR 184 A 1 HETATM 4 C C4 ETR . . . B 2 31.268 19.784 43.606 1 32 ? C4 ETR 184 A 1 HETATM 5 C C5 ETR . . . B 2 30.97 19.316 45.028 1 48.88 ? C5 ETR 184 A 1 HETATM 6 C C6 ETR . . . B 2 30.262 20.088 45.91 1 43.68 ? C6 ETR 184 A 1 HETATM 7 C C7 ETR . . . B 2 30.343 19.508 47.255 1 23.88 ? C7 ETR 184 A 1 HETATM 8 C C8 ETR . . . B 2 31.613 19.515 47.741 1 33.9 ? C8 ETR 184 A 1 HETATM 9 C C9 ETR . . . B 2 31.672 19.186 49.163 1 26.98 ? C9 ETR 184 A 1 HETATM 10 C C10 ETR . . . B 2 32.977 19.13 49.511 1 34.04 ? C10 ETR 184 A 1 HETATM 11 C C11 ETR . . . B 2 33.079 18.947 50.923 1 61.31 ? C11 ETR 184 A 1 HETATM 12 C C12 ETR . . . B 2 34.498 18.831 51.183 1 34.62 ? C12 ETR 184 A 1 HETATM 13 C C13 ETR . . . B 2 35.044 18.647 52.465 1 54.78 ? C13 ETR 184 A 1 HETATM 14 C C14 ETR . . . B 2 36.171 18.487 52.617 1 100 ? C14 ETR 184 A 1 HETATM 15 C C15 ETR . . . B 2 36.572 18.285 53.997 1 56.93 ? C15 ETR 184 A 1 HETATM 16 O O ETR . . . B 2 35.607 18.35 54.985 1 68.58 ? O ETR 184 A 1 HETATM 17 N N ETR . . . B 2 37.627 17.991 54.13 1 68.58 ? N ETR 184 A 1 HETATM 18 C C16 ETR . . . B 2 28.599 21.606 45.81 1 28.6 ? C16 ETR 184 A 1 HETATM 19 C C17 ETR . . . B 2 30.783 22.787 45.675 1 31.39 ? C17 ETR 184 A 1 HETATM 20 C C18 ETR . . . B 2 31.56 17.933 45.219 1 27.51 ? C18 ETR 184 A 1 HETATM 21 C C19 ETR . . . B 2 30.305 18.937 49.79 1 23.28 ? C19 ETR 184 A 1 HETATM 22 C C20 ETR . . . B 2 34.083 18.764 53.524 1 39.06 ? C20 ETR 184 A 1 HETATM 23 C C21 ETR . . . B 2 37.99 16.739 55.02 1 66.77 ? C21 ETR 184 A 1 HETATM 24 C C22 ETR . . . B 2 38.352 17.481 56.265 1 39.84 ? C22 ETR 184 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #