data_1ERO # _model_server_result.job_id e49XV-LNboAhNGRwA4kXyA _model_server_result.datetime_utc '2025-01-11 06:45:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ero # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1ERO # _exptl.entry_id 1ERO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.14 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ERO _cell.length_a 61.19 _cell.length_b 89.28 _cell.length_c 42.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ERO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 77 1_555 A SG CYS 98 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? covale 'Covalent Link with BJP' covale1 A OG SER 45 A SER 70 1_555 B B BJP . A BJP 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? # _chem_comp.formula 'C17 H18 B N O5' _chem_comp.formula_weight 327.14 _chem_comp.id BJP _chem_comp.mon_nstd_flag . _chem_comp.name '(1R)-2-PHENYLACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 BJP sing 70 n n C2 C5 BJP sing 71 n n C2 H21 BJP sing 72 n n C2 H22 BJP sing 73 n n C1 B BJP sing 74 n n C1 N1 BJP sing 75 n n C1 H1 BJP sing 76 n n C11 O3 BJP sing 77 n n C11 O4 BJP doub 78 n n C11 C9 BJP sing 79 n n O3 HO3 BJP sing 80 n n B OB1 BJP sing 81 n n B OB2 BJP sing 82 n n OB1 HOB1 BJP sing 83 n n C6 C5 BJP doub 84 n y C6 C7 BJP sing 85 n y C6 H6 BJP sing 86 n n C5 C10 BJP sing 87 n y C7 C8 BJP doub 88 n y C7 H7 BJP sing 89 n n C10 C9 BJP doub 90 n y C10 H10 BJP sing 91 n n C8 C9 BJP sing 92 n y C8 H8 BJP sing 93 n n OB2 HOB2 BJP sing 94 n n C19 C20 BJP doub 95 n y C19 C24 BJP sing 96 n y C19 C25 BJP sing 97 n n C20 C21 BJP sing 98 n y C20 H201 BJP sing 99 n n C21 C22 BJP doub 100 n y C21 H211 BJP sing 101 n n C22 C23 BJP sing 102 n y C22 H221 BJP sing 103 n n C23 C24 BJP doub 104 n y C23 H231 BJP sing 105 n n C24 H241 BJP sing 106 n n C25 C26 BJP sing 107 n n C25 H251 BJP sing 108 n n C25 H252 BJP sing 109 n n C26 O6 BJP doub 110 n n C26 N1 BJP sing 111 n n N1 HN1 BJP sing 112 n n # _atom_sites.entry_id 1ERO _atom_sites.fract_transf_matrix[1][1] 0.016343 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011201 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023753 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BJP A 1 300 70 BJP BJI . C 3 HOH A 1 500 500 HOH WAT . C 3 HOH A 2 501 501 HOH WAT . C 3 HOH A 3 502 502 HOH WAT . C 3 HOH A 4 503 503 HOH WAT . C 3 HOH A 5 504 504 HOH WAT . C 3 HOH A 6 505 505 HOH WAT . C 3 HOH A 7 506 506 HOH WAT . C 3 HOH A 8 507 507 HOH WAT . C 3 HOH A 9 511 511 HOH WAT . C 3 HOH A 10 512 512 HOH WAT . C 3 HOH A 11 515 515 HOH WAT . C 3 HOH A 12 517 517 HOH WAT . C 3 HOH A 13 519 519 HOH WAT . C 3 HOH A 14 520 520 HOH WAT . C 3 HOH A 15 521 521 HOH WAT . C 3 HOH A 16 522 522 HOH WAT . C 3 HOH A 17 524 524 HOH WAT . C 3 HOH A 18 525 525 HOH WAT . C 3 HOH A 19 528 528 HOH WAT . C 3 HOH A 20 530 530 HOH WAT . C 3 HOH A 21 531 531 HOH WAT . C 3 HOH A 22 535 535 HOH WAT . C 3 HOH A 23 536 536 HOH WAT . C 3 HOH A 24 538 538 HOH WAT . C 3 HOH A 25 539 539 HOH WAT . C 3 HOH A 26 541 541 HOH WAT . C 3 HOH A 27 542 542 HOH WAT . C 3 HOH A 28 543 543 HOH WAT . C 3 HOH A 29 546 546 HOH WAT . C 3 HOH A 30 550 550 HOH WAT . C 3 HOH A 31 551 551 HOH WAT . C 3 HOH A 32 552 552 HOH WAT . C 3 HOH A 33 553 553 HOH WAT . C 3 HOH A 34 554 554 HOH WAT . C 3 HOH A 35 556 556 HOH WAT . C 3 HOH A 36 557 557 HOH WAT . C 3 HOH A 37 558 558 HOH WAT . C 3 HOH A 38 559 559 HOH WAT . C 3 HOH A 39 560 560 HOH WAT . C 3 HOH A 40 561 561 HOH WAT . C 3 HOH A 41 566 566 HOH WAT . C 3 HOH A 42 568 568 HOH WAT . C 3 HOH A 43 570 570 HOH WAT . C 3 HOH A 44 577 577 HOH WAT . C 3 HOH A 45 585 585 HOH WAT . C 3 HOH A 46 588 588 HOH WAT . C 3 HOH A 47 589 589 HOH WAT . C 3 HOH A 48 597 597 HOH WAT . C 3 HOH A 49 598 598 HOH WAT . C 3 HOH A 50 602 602 HOH WAT . C 3 HOH A 51 619 619 HOH WAT . C 3 HOH A 52 624 624 HOH WAT . C 3 HOH A 53 625 625 HOH WAT . C 3 HOH A 54 626 626 HOH WAT . C 3 HOH A 55 631 631 HOH WAT . C 3 HOH A 56 667 667 HOH WAT . C 3 HOH A 57 669 669 HOH WAT . C 3 HOH A 58 674 674 HOH WAT . C 3 HOH A 59 688 688 HOH WAT . C 3 HOH A 60 700 700 HOH WAT . C 3 HOH A 61 717 717 HOH WAT . C 3 HOH A 62 727 727 HOH WAT . C 3 HOH A 63 803 803 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BJP . . . B 2 40.606 38.253 31.617 0.5 25.3 ? C2 BJP 300 A 1 HETATM 2 C C1 BJP . . . B 2 39.344 38.156 32.503 0.5 25.28 ? C1 BJP 300 A 1 HETATM 3 C C11 BJP . . . B 2 42.143 33.595 29.106 0.5 24.23 ? C11 BJP 300 A 1 HETATM 4 O O3 BJP . . . B 2 41.205 33.432 28.311 0.5 26.19 ? O3 BJP 300 A 1 HETATM 5 O O4 BJP . . . B 2 43.147 32.823 29.175 0.5 23.83 ? O4 BJP 300 A 1 HETATM 6 B B BJP . . . B 2 38.354 37.066 31.979 0.5 23.54 ? B BJP 300 A 1 HETATM 7 O OB1 BJP . . . B 2 38.721 35.76 32.463 0.5 22.71 ? OB1 BJP 300 A 1 HETATM 8 C C6 BJP . . . B 2 42.862 36.88 32.155 0.5 25.57 ? C6 BJP 300 A 1 HETATM 9 C C5 BJP . . . B 2 41.538 37.039 31.363 0.5 25.32 ? C5 BJP 300 A 1 HETATM 10 C C7 BJP . . . B 2 43.796 35.672 31.885 0.5 25.03 ? C7 BJP 300 A 1 HETATM 11 C C10 BJP . . . B 2 41.14 36.001 30.294 0.5 24.52 ? C10 BJP 300 A 1 HETATM 12 C C8 BJP . . . B 2 43.396 34.635 30.806 0.5 24.58 ? C8 BJP 300 A 1 HETATM 13 C C9 BJP . . . B 2 42.074 34.816 30.03 0.5 24.31 ? C9 BJP 300 A 1 HETATM 14 O OB2 BJP . . . B 2 37.122 37.539 32.615 0.5 21.4 ? OB2 BJP 300 A 1 HETATM 15 C C19 BJP . A . B 2 42.83 37.817 35.376 0.25 26.18 ? C19 BJP 300 A 1 HETATM 16 C C19 BJP . B . B 2 41.745 36.698 36.475 0.25 29.7 ? C19 BJP 300 A 1 HETATM 17 C C20 BJP . A . B 2 43.54 38.94 34.894 0.25 26.52 ? C20 BJP 300 A 1 HETATM 18 C C20 BJP . B . B 2 42.044 37.094 37.778 0.25 29.79 ? C20 BJP 300 A 1 HETATM 19 C C21 BJP . A . B 2 44.911 38.813 34.615 0.25 26.59 ? C21 BJP 300 A 1 HETATM 20 C C21 BJP . B . B 2 43.257 36.705 38.338 0.25 30.35 ? C21 BJP 300 A 1 HETATM 21 C C22 BJP . A . B 2 45.554 37.579 34.802 0.25 26.61 ? C22 BJP 300 A 1 HETATM 22 C C22 BJP . B . B 2 44.136 35.872 37.636 0.25 30.67 ? C22 BJP 300 A 1 HETATM 23 C C23 BJP . A . B 2 44.825 36.487 35.296 0.25 26.53 ? C23 BJP 300 A 1 HETATM 24 C C23 BJP . B . B 2 43.822 35.444 36.342 0.25 30.15 ? C23 BJP 300 A 1 HETATM 25 C C24 BJP . A . B 2 43.457 36.586 35.506 0.25 26.3 ? C24 BJP 300 A 1 HETATM 26 C C24 BJP . B . B 2 42.612 35.851 35.766 0.25 30.03 ? C24 BJP 300 A 1 HETATM 27 C C25 BJP . A . B 2 41.441 37.788 35.623 0.25 25.75 ? C25 BJP 300 A 1 HETATM 28 C C25 BJP . B . B 2 40.504 37.052 35.937 0.25 29.08 ? C25 BJP 300 A 1 HETATM 29 C C26 BJP . A . B 2 40.762 38.491 34.422 0.25 25.25 ? C26 BJP 300 A 1 HETATM 30 C C26 BJP . B . B 2 40.538 37.87 34.619 0.25 28.09 ? C26 BJP 300 A 1 HETATM 31 O O6 BJP . A . B 2 40.992 39.662 34.087 0.25 24.24 ? O6 BJP 300 A 1 HETATM 32 O O6 BJP . B . B 2 41.325 38.798 34.426 0.25 28.18 ? O6 BJP 300 A 1 HETATM 33 N N1 BJP . A . B 2 39.956 37.701 33.731 0.25 25.58 ? N1 BJP 300 A 1 HETATM 34 N N1 BJP . B . B 2 39.58 37.5 33.777 0.25 26.97 ? N1 BJP 300 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 34 #