data_1ERX # _model_server_result.job_id Xf3ZpVfpQsydVbcUvx8I4w _model_server_result.datetime_utc '2025-06-23 08:00:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1erx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":347}' # _entry.id 1ERX # _exptl.entry_id 1ERX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.19 _cell.angle_gamma 90 _cell.entry_id 1ERX _cell.length_a 70.319 _cell.length_b 42.636 _cell.length_c 52.573 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ERX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 B FE HEV . A HEV 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 B FE HEV . A HEV 185 1_555 C N NO . A NO 186 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.512 ? metalc ? metalc3 B FE HEV . A HEV 185 1_555 C N NO . A NO 186 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.974 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1ERX _atom_sites.fract_transf_matrix[1][1] 0.014221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001042 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEV A 1 185 185 HEV HEV . C 3 NO A 1 186 186 NO NMO . D 4 CIT A 1 347 347 CIT CIT . E 5 HOH A 1 187 187 HOH HOH . E 5 HOH A 2 188 188 HOH HOH . E 5 HOH A 3 189 189 HOH HOH . E 5 HOH A 4 190 190 HOH HOH . E 5 HOH A 5 191 191 HOH HOH . E 5 HOH A 6 192 192 HOH HOH . E 5 HOH A 7 193 193 HOH HOH . E 5 HOH A 8 194 194 HOH HOH . E 5 HOH A 9 195 195 HOH HOH . E 5 HOH A 10 196 196 HOH HOH . E 5 HOH A 11 197 197 HOH HOH . E 5 HOH A 12 198 198 HOH HOH . E 5 HOH A 13 199 199 HOH HOH . E 5 HOH A 14 200 200 HOH HOH . E 5 HOH A 15 201 201 HOH HOH . E 5 HOH A 16 202 202 HOH HOH . E 5 HOH A 17 203 203 HOH HOH . E 5 HOH A 18 204 204 HOH HOH . E 5 HOH A 19 205 205 HOH HOH . E 5 HOH A 20 206 206 HOH HOH . E 5 HOH A 21 207 207 HOH HOH . E 5 HOH A 22 208 208 HOH HOH . E 5 HOH A 23 209 209 HOH HOH . E 5 HOH A 24 210 210 HOH HOH . E 5 HOH A 25 211 211 HOH HOH . E 5 HOH A 26 212 212 HOH HOH . E 5 HOH A 27 213 213 HOH HOH . E 5 HOH A 28 214 214 HOH HOH . E 5 HOH A 29 215 215 HOH HOH . E 5 HOH A 30 216 216 HOH HOH . E 5 HOH A 31 217 217 HOH HOH . E 5 HOH A 32 218 218 HOH HOH . E 5 HOH A 33 219 219 HOH HOH . E 5 HOH A 34 220 220 HOH HOH . E 5 HOH A 35 221 221 HOH HOH . E 5 HOH A 36 222 222 HOH HOH . E 5 HOH A 37 223 223 HOH HOH . E 5 HOH A 38 224 224 HOH HOH . E 5 HOH A 39 225 225 HOH HOH . E 5 HOH A 40 226 226 HOH HOH . E 5 HOH A 41 227 227 HOH HOH . E 5 HOH A 42 228 228 HOH HOH . E 5 HOH A 43 229 229 HOH HOH . E 5 HOH A 44 230 230 HOH HOH . E 5 HOH A 45 231 231 HOH HOH . E 5 HOH A 46 232 232 HOH HOH . E 5 HOH A 47 233 233 HOH HOH . E 5 HOH A 48 234 234 HOH HOH . E 5 HOH A 49 235 235 HOH HOH . E 5 HOH A 50 236 236 HOH HOH . E 5 HOH A 51 237 237 HOH HOH . E 5 HOH A 52 238 238 HOH HOH . E 5 HOH A 53 239 239 HOH HOH . E 5 HOH A 54 240 240 HOH HOH . E 5 HOH A 55 241 241 HOH HOH . E 5 HOH A 56 242 242 HOH HOH . E 5 HOH A 57 243 243 HOH HOH . E 5 HOH A 58 244 244 HOH HOH . E 5 HOH A 59 245 245 HOH HOH . E 5 HOH A 60 246 246 HOH HOH . E 5 HOH A 61 247 247 HOH HOH . E 5 HOH A 62 248 248 HOH HOH . E 5 HOH A 63 249 249 HOH HOH . E 5 HOH A 64 250 250 HOH HOH . E 5 HOH A 65 251 251 HOH HOH . E 5 HOH A 66 252 252 HOH HOH . E 5 HOH A 67 253 253 HOH HOH . E 5 HOH A 68 254 254 HOH HOH . E 5 HOH A 69 255 255 HOH HOH . E 5 HOH A 70 256 256 HOH HOH . E 5 HOH A 71 257 257 HOH HOH . E 5 HOH A 72 258 258 HOH HOH . E 5 HOH A 73 259 259 HOH HOH . E 5 HOH A 74 260 260 HOH HOH . E 5 HOH A 75 261 261 HOH HOH . E 5 HOH A 76 262 262 HOH HOH . E 5 HOH A 77 263 263 HOH HOH . E 5 HOH A 78 264 264 HOH HOH . E 5 HOH A 79 265 265 HOH HOH . E 5 HOH A 80 266 266 HOH HOH . E 5 HOH A 81 267 267 HOH HOH . E 5 HOH A 82 268 268 HOH HOH . E 5 HOH A 83 269 269 HOH HOH . E 5 HOH A 84 270 270 HOH HOH . E 5 HOH A 85 271 271 HOH HOH . E 5 HOH A 86 272 272 HOH HOH . E 5 HOH A 87 273 273 HOH HOH . E 5 HOH A 88 274 274 HOH HOH . E 5 HOH A 89 275 275 HOH HOH . E 5 HOH A 90 276 276 HOH HOH . E 5 HOH A 91 277 277 HOH HOH . E 5 HOH A 92 278 278 HOH HOH . E 5 HOH A 93 279 279 HOH HOH . E 5 HOH A 94 280 280 HOH HOH . E 5 HOH A 95 281 281 HOH HOH . E 5 HOH A 96 282 282 HOH HOH . E 5 HOH A 97 283 283 HOH HOH . E 5 HOH A 98 284 284 HOH HOH . E 5 HOH A 99 285 285 HOH HOH . E 5 HOH A 100 286 286 HOH HOH . E 5 HOH A 101 287 287 HOH HOH . E 5 HOH A 102 288 288 HOH HOH . E 5 HOH A 103 289 289 HOH HOH . E 5 HOH A 104 290 290 HOH HOH . E 5 HOH A 105 291 291 HOH HOH . E 5 HOH A 106 292 292 HOH HOH . E 5 HOH A 107 293 293 HOH HOH . E 5 HOH A 108 294 294 HOH HOH . E 5 HOH A 109 295 295 HOH HOH . E 5 HOH A 110 296 296 HOH HOH . E 5 HOH A 111 297 297 HOH HOH . E 5 HOH A 112 298 298 HOH HOH . E 5 HOH A 113 299 299 HOH HOH . E 5 HOH A 114 300 300 HOH HOH . E 5 HOH A 115 301 301 HOH HOH . E 5 HOH A 116 302 302 HOH HOH . E 5 HOH A 117 303 303 HOH HOH . E 5 HOH A 118 304 304 HOH HOH . E 5 HOH A 119 305 305 HOH HOH . E 5 HOH A 120 306 306 HOH HOH . E 5 HOH A 121 307 307 HOH HOH . E 5 HOH A 122 308 308 HOH HOH . E 5 HOH A 123 309 309 HOH HOH . E 5 HOH A 124 310 310 HOH HOH . E 5 HOH A 125 311 311 HOH HOH . E 5 HOH A 126 312 312 HOH HOH . E 5 HOH A 127 313 313 HOH HOH . E 5 HOH A 128 314 314 HOH HOH . E 5 HOH A 129 315 315 HOH HOH . E 5 HOH A 130 316 316 HOH HOH . E 5 HOH A 131 317 317 HOH HOH . E 5 HOH A 132 318 318 HOH HOH . E 5 HOH A 133 319 319 HOH HOH . E 5 HOH A 134 320 320 HOH HOH . E 5 HOH A 135 321 321 HOH HOH . E 5 HOH A 136 322 322 HOH HOH . E 5 HOH A 137 323 323 HOH HOH . E 5 HOH A 138 324 324 HOH HOH . E 5 HOH A 139 325 325 HOH HOH . E 5 HOH A 140 326 326 HOH HOH . E 5 HOH A 141 327 327 HOH HOH . E 5 HOH A 142 328 328 HOH HOH . E 5 HOH A 143 329 329 HOH HOH . E 5 HOH A 144 330 330 HOH HOH . E 5 HOH A 145 331 331 HOH HOH . E 5 HOH A 146 332 332 HOH HOH . E 5 HOH A 147 333 333 HOH HOH . E 5 HOH A 148 334 334 HOH HOH . E 5 HOH A 149 335 335 HOH HOH . E 5 HOH A 150 336 336 HOH HOH . E 5 HOH A 151 337 337 HOH HOH . E 5 HOH A 152 338 338 HOH HOH . E 5 HOH A 153 339 339 HOH HOH . E 5 HOH A 154 340 340 HOH HOH . E 5 HOH A 155 341 341 HOH HOH . E 5 HOH A 156 342 342 HOH HOH . E 5 HOH A 157 343 343 HOH HOH . E 5 HOH A 158 344 344 HOH HOH . E 5 HOH A 159 345 345 HOH HOH . E 5 HOH A 160 346 346 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 4 -1.035 24.585 24.134 0.5 32.58 ? C1 CIT 347 A 1 HETATM 2 O O1 CIT . . . D 4 -0.966 23.935 23.072 0.5 33.47 ? O1 CIT 347 A 1 HETATM 3 O O2 CIT . . . D 4 -0.698 25.792 24.19 0.5 32.31 ? O2 CIT 347 A 1 HETATM 4 C C2 CIT . . . D 4 -1.562 23.889 25.419 0.5 26.35 ? C2 CIT 347 A 1 HETATM 5 C C3 CIT . . . D 4 -2.025 24.766 26.642 0.5 30.78 ? C3 CIT 347 A 1 HETATM 6 O O7 CIT . . . D 4 -3.084 25.576 26.12 0.5 36.57 ? O7 CIT 347 A 1 HETATM 7 C C4 CIT . . . D 4 -2.635 23.837 27.764 0.5 30.46 ? C4 CIT 347 A 1 HETATM 8 C C5 CIT . . . D 4 -3.51 24.425 28.906 0.5 33.17 ? C5 CIT 347 A 1 HETATM 9 O O3 CIT . . . D 4 -3.685 23.771 29.957 0.5 32.86 ? O3 CIT 347 A 1 HETATM 10 O O4 CIT . . . D 4 -4.03 25.557 28.757 0.5 34.44 ? O4 CIT 347 A 1 HETATM 11 C C6 CIT . . . D 4 -0.771 25.628 27.122 0.5 34.76 ? C6 CIT 347 A 1 HETATM 12 O O5 CIT . . . D 4 -0.703 26.014 28.324 0.5 31.28 ? O5 CIT 347 A 1 HETATM 13 O O6 CIT . . . D 4 0.151 25.928 26.314 0.5 37.21 ? O6 CIT 347 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #