data_1ESE # _model_server_result.job_id sq91MsJ4g18NxTG_fp9ttA _model_server_result.datetime_utc '2024-11-09 02:11:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ese # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 1ESE # _exptl.entry_id 1ESE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.102 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIETHYL PHOSPHONATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.74 _cell.angle_gamma 90 _cell.entry_id 1ESE _cell.length_a 130.39 _cell.length_b 48.52 _cell.length_c 70.19 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ESE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 64 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf2 A SG CYS 117 A CYS 117 1_555 A SG CYS 141 A CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? disulf ? disulf3 A SG CYS 197 A CYS 197 1_555 A SG CYS 255 A CYS 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 A OG SER 14 A SER 14 1_555 B O1 DEP . A DEP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale2 A OG SER 14 A SER 14 1_555 B P DEP . A DEP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.676 ? # _chem_comp.formula 'C4 H11 O3 P' _chem_comp.formula_weight 138.102 _chem_comp.id DEP _chem_comp.mon_nstd_flag . _chem_comp.name 'DIETHYL PHOSPHONATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DEP sing 83 n n C1 O1 DEP sing 84 n n C1 H11 DEP sing 85 n n C1 H12 DEP sing 86 n n C2 H21 DEP sing 87 n n C2 H22 DEP sing 88 n n C2 H23 DEP sing 89 n n C3 C4 DEP sing 90 n n C3 O2 DEP sing 91 n n C3 H31 DEP sing 92 n n C3 H32 DEP sing 93 n n C4 H41 DEP sing 94 n n C4 H42 DEP sing 95 n n C4 H43 DEP sing 96 n n O1 P DEP sing 97 n n O2 P DEP sing 98 n n O3 P DEP doub 99 n n HP1 P DEP sing 100 n n # _atom_sites.entry_id 1ESE _atom_sites.fract_transf_matrix[1][1] 0.007669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004033 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02061 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016097 _atom_sites.fract_transf_vector[1] 0.25 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DEP A 1 400 400 DEP DEP . C 3 HOH A 1 500 500 HOH HOH . C 3 HOH A 2 501 501 HOH HOH . C 3 HOH A 3 502 502 HOH HOH . C 3 HOH A 4 503 503 HOH HOH . C 3 HOH A 5 504 504 HOH HOH . C 3 HOH A 6 505 505 HOH HOH . C 3 HOH A 7 506 506 HOH HOH . C 3 HOH A 8 507 507 HOH HOH . C 3 HOH A 9 508 508 HOH HOH . C 3 HOH A 10 509 509 HOH HOH . C 3 HOH A 11 510 510 HOH HOH . C 3 HOH A 12 511 511 HOH HOH . C 3 HOH A 13 512 512 HOH HOH . C 3 HOH A 14 513 513 HOH HOH . C 3 HOH A 15 514 514 HOH HOH . C 3 HOH A 16 515 515 HOH HOH . C 3 HOH A 17 516 516 HOH HOH . C 3 HOH A 18 517 517 HOH HOH . C 3 HOH A 19 518 518 HOH HOH . C 3 HOH A 20 519 519 HOH HOH . C 3 HOH A 21 520 520 HOH HOH . C 3 HOH A 22 521 521 HOH HOH . C 3 HOH A 23 522 522 HOH HOH . C 3 HOH A 24 523 523 HOH HOH . C 3 HOH A 25 524 524 HOH HOH . C 3 HOH A 26 525 525 HOH HOH . C 3 HOH A 27 526 526 HOH HOH . C 3 HOH A 28 527 527 HOH HOH . C 3 HOH A 29 528 528 HOH HOH . C 3 HOH A 30 529 529 HOH HOH . C 3 HOH A 31 530 530 HOH HOH . C 3 HOH A 32 531 531 HOH HOH . C 3 HOH A 33 532 532 HOH HOH . C 3 HOH A 34 533 533 HOH HOH . C 3 HOH A 35 534 534 HOH HOH . C 3 HOH A 36 535 535 HOH HOH . C 3 HOH A 37 536 536 HOH HOH . C 3 HOH A 38 537 537 HOH HOH . C 3 HOH A 39 538 538 HOH HOH . C 3 HOH A 40 539 539 HOH HOH . C 3 HOH A 41 540 540 HOH HOH . C 3 HOH A 42 541 541 HOH HOH . C 3 HOH A 43 542 542 HOH HOH . C 3 HOH A 44 543 543 HOH HOH . C 3 HOH A 45 544 544 HOH HOH . C 3 HOH A 46 545 545 HOH HOH . C 3 HOH A 47 546 546 HOH HOH . C 3 HOH A 48 547 547 HOH HOH . C 3 HOH A 49 548 548 HOH HOH . C 3 HOH A 50 549 549 HOH HOH . C 3 HOH A 51 550 550 HOH HOH . C 3 HOH A 52 551 551 HOH HOH . C 3 HOH A 53 552 552 HOH HOH . C 3 HOH A 54 553 553 HOH HOH . C 3 HOH A 55 554 554 HOH HOH . C 3 HOH A 56 555 555 HOH HOH . C 3 HOH A 57 556 556 HOH HOH . C 3 HOH A 58 557 557 HOH HOH . C 3 HOH A 59 558 558 HOH HOH . C 3 HOH A 60 559 559 HOH HOH . C 3 HOH A 61 560 560 HOH HOH . C 3 HOH A 62 561 561 HOH HOH . C 3 HOH A 63 562 562 HOH HOH . C 3 HOH A 64 563 563 HOH HOH . C 3 HOH A 65 564 564 HOH HOH . C 3 HOH A 66 565 565 HOH HOH . C 3 HOH A 67 566 566 HOH HOH . C 3 HOH A 68 567 567 HOH HOH . C 3 HOH A 69 568 568 HOH HOH . C 3 HOH A 70 569 569 HOH HOH . C 3 HOH A 71 570 570 HOH HOH . C 3 HOH A 72 571 571 HOH HOH . C 3 HOH A 73 572 572 HOH HOH . C 3 HOH A 74 573 573 HOH HOH . C 3 HOH A 75 574 574 HOH HOH . C 3 HOH A 76 575 575 HOH HOH . C 3 HOH A 77 576 576 HOH HOH . C 3 HOH A 78 577 577 HOH HOH . C 3 HOH A 79 578 578 HOH HOH . C 3 HOH A 80 579 579 HOH HOH . C 3 HOH A 81 580 580 HOH HOH . C 3 HOH A 82 581 581 HOH HOH . C 3 HOH A 83 582 582 HOH HOH . C 3 HOH A 84 583 583 HOH HOH . C 3 HOH A 85 584 584 HOH HOH . C 3 HOH A 86 585 585 HOH HOH . C 3 HOH A 87 586 586 HOH HOH . C 3 HOH A 88 587 587 HOH HOH . C 3 HOH A 89 588 588 HOH HOH . C 3 HOH A 90 589 589 HOH HOH . C 3 HOH A 91 590 590 HOH HOH . C 3 HOH A 92 591 591 HOH HOH . C 3 HOH A 93 592 592 HOH HOH . C 3 HOH A 94 593 593 HOH HOH . C 3 HOH A 95 594 594 HOH HOH . C 3 HOH A 96 595 595 HOH HOH . C 3 HOH A 97 596 596 HOH HOH . C 3 HOH A 98 597 597 HOH HOH . C 3 HOH A 99 598 598 HOH HOH . C 3 HOH A 100 599 599 HOH HOH . C 3 HOH A 101 600 600 HOH HOH . C 3 HOH A 102 601 601 HOH HOH . C 3 HOH A 103 602 602 HOH HOH . C 3 HOH A 104 603 603 HOH HOH . C 3 HOH A 105 604 604 HOH HOH . C 3 HOH A 106 605 605 HOH HOH . C 3 HOH A 107 606 606 HOH HOH . C 3 HOH A 108 607 607 HOH HOH . C 3 HOH A 109 608 608 HOH HOH . C 3 HOH A 110 609 609 HOH HOH . C 3 HOH A 111 610 610 HOH HOH . C 3 HOH A 112 611 611 HOH HOH . C 3 HOH A 113 612 612 HOH HOH . C 3 HOH A 114 613 613 HOH HOH . C 3 HOH A 115 614 614 HOH HOH . C 3 HOH A 116 615 615 HOH HOH . C 3 HOH A 117 616 616 HOH HOH . C 3 HOH A 118 617 617 HOH HOH . C 3 HOH A 119 618 618 HOH HOH . C 3 HOH A 120 619 619 HOH HOH . C 3 HOH A 121 620 620 HOH HOH . C 3 HOH A 122 621 621 HOH HOH . C 3 HOH A 123 622 622 HOH HOH . C 3 HOH A 124 623 623 HOH HOH . C 3 HOH A 125 624 624 HOH HOH . C 3 HOH A 126 625 625 HOH HOH . C 3 HOH A 127 626 626 HOH HOH . C 3 HOH A 128 627 627 HOH HOH . C 3 HOH A 129 628 628 HOH HOH . C 3 HOH A 130 629 629 HOH HOH . C 3 HOH A 131 630 630 HOH HOH . C 3 HOH A 132 631 631 HOH HOH . C 3 HOH A 133 632 632 HOH HOH . C 3 HOH A 134 633 633 HOH HOH . C 3 HOH A 135 634 634 HOH HOH . C 3 HOH A 136 635 635 HOH HOH . C 3 HOH A 137 636 636 HOH HOH . C 3 HOH A 138 637 637 HOH HOH . C 3 HOH A 139 638 638 HOH HOH . C 3 HOH A 140 639 639 HOH HOH . C 3 HOH A 141 640 640 HOH HOH . C 3 HOH A 142 641 641 HOH HOH . C 3 HOH A 143 642 642 HOH HOH . C 3 HOH A 144 643 643 HOH HOH . C 3 HOH A 145 644 644 HOH HOH . C 3 HOH A 146 645 645 HOH HOH . C 3 HOH A 147 646 646 HOH HOH . C 3 HOH A 148 647 647 HOH HOH . C 3 HOH A 149 648 648 HOH HOH . C 3 HOH A 150 649 649 HOH HOH . C 3 HOH A 151 650 650 HOH HOH . C 3 HOH A 152 651 651 HOH HOH . C 3 HOH A 153 652 652 HOH HOH . C 3 HOH A 154 653 653 HOH HOH . C 3 HOH A 155 654 654 HOH HOH . C 3 HOH A 156 655 655 HOH HOH . C 3 HOH A 157 656 656 HOH HOH . C 3 HOH A 158 657 657 HOH HOH . C 3 HOH A 159 658 658 HOH HOH . C 3 HOH A 160 659 659 HOH HOH . C 3 HOH A 161 660 660 HOH HOH . C 3 HOH A 162 661 661 HOH HOH . C 3 HOH A 163 662 662 HOH HOH . C 3 HOH A 164 663 663 HOH HOH . C 3 HOH A 165 664 664 HOH HOH . C 3 HOH A 166 665 665 HOH HOH . C 3 HOH A 167 666 666 HOH HOH . C 3 HOH A 168 667 667 HOH HOH . C 3 HOH A 169 668 668 HOH HOH . C 3 HOH A 170 669 669 HOH HOH . C 3 HOH A 171 670 670 HOH HOH . C 3 HOH A 172 671 671 HOH HOH . C 3 HOH A 173 672 672 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DEP . . . B 2 48.223 14.243 -18.823 1 29.19 ? C1 DEP 400 A 1 HETATM 2 C C2 DEP . . . B 2 47.442 13.987 -20.19 1 29.66 ? C2 DEP 400 A 1 HETATM 3 C C3 DEP . . . B 2 47.947 10.933 -14.083 1 30.05 ? C3 DEP 400 A 1 HETATM 4 C C4 DEP . . . B 2 47.354 9.593 -13.403 1 31.6 ? C4 DEP 400 A 1 HETATM 5 O O1 DEP . . . B 2 47.879 13.395 -17.688 1 29.09 ? O1 DEP 400 A 1 HETATM 6 O O2 DEP . . . B 2 47.416 11.616 -15.314 1 29.43 ? O2 DEP 400 A 1 HETATM 7 O O3 DEP . . . B 2 49.507 12.606 -16.103 1 28.66 ? O3 DEP 400 A 1 HETATM 8 P P DEP . . . B 2 48.215 12.803 -16.166 1 28.81 ? P DEP 400 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #