data_1ESP # _model_server_result.job_id -Da3iHANz1LWIj18pYUwjA _model_server_result.datetime_utc '2024-11-29 11:06:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1esp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":322}' # _entry.id 1ESP # _exptl.entry_id 1ESP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ESP _cell.length_a 76.57 _cell.length_b 76.57 _cell.length_c 201.91 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ESP _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 58 A ASP 58 1_555 D CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc2 A OD1 ASP 58 A ASP 58 1_555 D CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc3 A OD1 ASP 60 A ASP 60 1_555 D CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc4 A O VAL 62 A VAL 62 1_555 D CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc5 A OD2 ASP 139 A ASP 139 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc6 A NE2 HIS 143 A HIS 143 1_555 F ZN ZN . A ZN 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc7 A NE2 HIS 147 A HIS 147 1_555 F ZN ZN . A ZN 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc8 A OE2 GLU 167 A GLU 167 1_555 F ZN ZN . A ZN 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc9 A OE1 GLU 178 A GLU 178 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc10 A OE2 GLU 178 A GLU 178 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.078 ? metalc ? metalc11 A OE2 GLU 178 A GLU 178 1_555 C CA CA . A CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc12 A O ARG 183 A ARG 183 1_555 C CA CA . A CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.258 ? metalc ? metalc13 A O ASN 184 A ASN 184 1_555 C CA CA . A CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc14 A OD1 ASP 186 A ASP 186 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc15 A OD2 ASP 186 A ASP 186 1_555 C CA CA . A CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc16 A O GLU 188 A GLU 188 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc17 A OE2 GLU 191 A GLU 191 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc18 A OE1 GLU 191 A GLU 191 1_555 B CA CA . A CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc19 A OE2 GLU 191 A GLU 191 1_555 C CA CA . A CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc20 A O TYR 194 A TYR 194 1_555 E CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc21 A OG1 THR 195 A THR 195 1_555 E CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc22 A O THR 195 A THR 195 1_555 E CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc23 A O LYS 198 A LYS 198 1_555 E CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc24 A OD1 ASP 201 A ASP 201 1_555 E CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc25 B CA CA . A CA 319 1_555 G O HOH . A HOH 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc26 C CA CA . A CA 320 1_555 G O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc27 D CA CA . A CA 321 1_555 G O HOH . A HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc28 D CA CA . A CA 321 1_555 G O HOH . A HOH 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc29 D CA CA . A CA 321 1_555 G O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc30 E CA CA . A CA 322 1_555 G O HOH . A HOH 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc31 F ZN ZN . A ZN 323 1_555 G O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ESP _atom_sites.fract_transf_matrix[1][1] 0.01306 _atom_sites.fract_transf_matrix[1][2] 0.00754 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01508 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 319 319 CA CA . C 2 CA A 1 320 320 CA CA . D 2 CA A 1 321 321 CA CA . E 2 CA A 1 322 322 CA CA . F 3 ZN A 1 323 323 ZN ZN . G 4 HOH A 1 324 324 HOH HOH . G 4 HOH A 2 325 325 HOH HOH . G 4 HOH A 3 326 326 HOH HOH . G 4 HOH A 4 327 327 HOH HOH . G 4 HOH A 5 328 328 HOH HOH . G 4 HOH A 6 329 329 HOH HOH . G 4 HOH A 7 330 330 HOH HOH . G 4 HOH A 8 331 331 HOH HOH . G 4 HOH A 9 332 332 HOH HOH . G 4 HOH A 10 333 333 HOH HOH . G 4 HOH A 11 334 334 HOH HOH . G 4 HOH A 12 335 335 HOH HOH . G 4 HOH A 13 336 336 HOH HOH . G 4 HOH A 14 337 337 HOH HOH . G 4 HOH A 15 338 338 HOH HOH . G 4 HOH A 16 339 339 HOH HOH . G 4 HOH A 17 340 340 HOH HOH . G 4 HOH A 18 341 341 HOH HOH . G 4 HOH A 19 342 342 HOH HOH . G 4 HOH A 20 343 343 HOH HOH . G 4 HOH A 21 344 344 HOH HOH . G 4 HOH A 22 345 345 HOH HOH . G 4 HOH A 23 346 346 HOH HOH . G 4 HOH A 24 347 347 HOH HOH . G 4 HOH A 25 348 348 HOH HOH . G 4 HOH A 26 349 349 HOH HOH . G 4 HOH A 27 350 350 HOH HOH . G 4 HOH A 28 351 351 HOH HOH . G 4 HOH A 29 352 352 HOH HOH . G 4 HOH A 30 353 353 HOH HOH . G 4 HOH A 31 354 354 HOH HOH . G 4 HOH A 32 355 355 HOH HOH . G 4 HOH A 33 356 356 HOH HOH . G 4 HOH A 34 357 357 HOH HOH . G 4 HOH A 35 358 358 HOH HOH . G 4 HOH A 36 359 359 HOH HOH . G 4 HOH A 37 360 360 HOH HOH . G 4 HOH A 38 361 361 HOH HOH . G 4 HOH A 39 362 362 HOH HOH . G 4 HOH A 40 363 363 HOH HOH . G 4 HOH A 41 364 364 HOH HOH . G 4 HOH A 42 365 365 HOH HOH . G 4 HOH A 43 366 366 HOH HOH . G 4 HOH A 44 367 367 HOH HOH . G 4 HOH A 45 368 368 HOH HOH . G 4 HOH A 46 369 369 HOH HOH . G 4 HOH A 47 370 370 HOH HOH . G 4 HOH A 48 371 371 HOH HOH . G 4 HOH A 49 372 372 HOH HOH . G 4 HOH A 50 373 373 HOH HOH . G 4 HOH A 51 374 374 HOH HOH . G 4 HOH A 52 375 375 HOH HOH . G 4 HOH A 53 376 376 HOH HOH . G 4 HOH A 54 378 378 HOH HOH . G 4 HOH A 55 379 379 HOH HOH . G 4 HOH A 56 380 380 HOH HOH . G 4 HOH A 57 381 381 HOH HOH . G 4 HOH A 58 382 382 HOH HOH . G 4 HOH A 59 383 383 HOH HOH . G 4 HOH A 60 384 384 HOH HOH . G 4 HOH A 61 385 385 HOH HOH . G 4 HOH A 62 386 386 HOH HOH . G 4 HOH A 63 387 387 HOH HOH . G 4 HOH A 64 389 389 HOH HOH . G 4 HOH A 65 390 390 HOH HOH . G 4 HOH A 66 391 391 HOH HOH . G 4 HOH A 67 392 392 HOH HOH . G 4 HOH A 68 393 393 HOH HOH . G 4 HOH A 69 394 394 HOH HOH . G 4 HOH A 70 395 395 HOH HOH . G 4 HOH A 71 396 396 HOH HOH . G 4 HOH A 72 397 397 HOH HOH . G 4 HOH A 73 398 398 HOH HOH . G 4 HOH A 74 399 399 HOH HOH . G 4 HOH A 75 400 400 HOH HOH . G 4 HOH A 76 401 401 HOH HOH . G 4 HOH A 77 402 402 HOH HOH . G 4 HOH A 78 403 403 HOH HOH . G 4 HOH A 79 404 404 HOH HOH . G 4 HOH A 80 405 405 HOH HOH . G 4 HOH A 81 406 406 HOH HOH . G 4 HOH A 82 407 407 HOH HOH . G 4 HOH A 83 408 408 HOH HOH . G 4 HOH A 84 409 409 HOH HOH . G 4 HOH A 85 410 410 HOH HOH . G 4 HOH A 86 411 411 HOH HOH . G 4 HOH A 87 412 412 HOH HOH . G 4 HOH A 88 413 413 HOH HOH . G 4 HOH A 89 414 414 HOH HOH . G 4 HOH A 90 415 415 HOH HOH . G 4 HOH A 91 416 416 HOH HOH . G 4 HOH A 92 417 417 HOH HOH . G 4 HOH A 93 418 418 HOH HOH . G 4 HOH A 94 419 419 HOH HOH . G 4 HOH A 95 420 420 HOH HOH . G 4 HOH A 96 421 421 HOH HOH . G 4 HOH A 97 422 422 HOH HOH . G 4 HOH A 98 423 423 HOH HOH . G 4 HOH A 99 424 424 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 41.19 _atom_site.Cartn_y 15.344 _atom_site.Cartn_z 27.712 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 322 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #