data_1ET0 # _model_server_result.job_id 7Hxrzm-E5M3ltsT47oE7dA _model_server_result.datetime_utc '2025-08-31 16:21:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1et0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":413}' # _entry.id 1ET0 # _exptl.entry_id 1ET0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.142 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "PYRIDOXAL-5'-PHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ET0 _cell.length_a 40.5 _cell.length_b 73.93 _cell.length_c 83.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ET0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 140 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 159 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C4A _struct_conn.ptnr2_label_comp_id PLP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id PLP _struct_conn.ptnr2_auth_seq_id 413 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.36 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H10 N O6 P' _chem_comp.formula_weight 247.142 _chem_comp.id PLP _chem_comp.mon_nstd_flag . _chem_comp.name "PYRIDOXAL-5'-PHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'VITAMIN B6 Phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PLP doub 260 n y N1 C6 PLP sing 261 n y C2 C2A PLP sing 262 n n C2 C3 PLP sing 263 n y C2A H2A1 PLP sing 264 n n C2A H2A2 PLP sing 265 n n C2A H2A3 PLP sing 266 n n C3 O3 PLP sing 267 n n C3 C4 PLP doub 268 n y O3 HO3 PLP sing 269 n n C4 C4A PLP sing 270 n n C4 C5 PLP sing 271 n y C4A O4A PLP doub 272 n n C4A H4A PLP sing 273 n n C5 C6 PLP doub 274 n y C5 C5A PLP sing 275 n n C6 H6 PLP sing 276 n n C5A O4P PLP sing 277 n n C5A H5A1 PLP sing 278 n n C5A H5A2 PLP sing 279 n n O4P P PLP sing 280 n n P O1P PLP doub 281 n n P O2P PLP sing 282 n n P O3P PLP sing 283 n n O2P HOP2 PLP sing 284 n n O3P HOP3 PLP sing 285 n n # _atom_sites.entry_id 1ET0 _atom_sites.fract_transf_matrix[1][1] 0.02469 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLP A 1 413 413 PLP PLP . C 3 HOH A 1 501 501 HOH WAT . C 3 HOH A 2 502 502 HOH WAT . C 3 HOH A 3 503 503 HOH WAT . C 3 HOH A 4 504 504 HOH WAT . C 3 HOH A 5 505 505 HOH WAT . C 3 HOH A 6 506 506 HOH WAT . C 3 HOH A 7 507 507 HOH WAT . C 3 HOH A 8 508 508 HOH WAT . C 3 HOH A 9 509 509 HOH WAT . C 3 HOH A 10 510 510 HOH WAT . C 3 HOH A 11 511 511 HOH WAT . C 3 HOH A 12 512 512 HOH WAT . C 3 HOH A 13 513 513 HOH WAT . C 3 HOH A 14 514 514 HOH WAT . C 3 HOH A 15 515 515 HOH WAT . C 3 HOH A 16 516 516 HOH WAT . C 3 HOH A 17 517 517 HOH WAT . C 3 HOH A 18 518 518 HOH WAT . C 3 HOH A 19 519 519 HOH WAT . C 3 HOH A 20 520 520 HOH WAT . C 3 HOH A 21 521 521 HOH WAT . C 3 HOH A 22 522 522 HOH WAT . C 3 HOH A 23 523 523 HOH WAT . C 3 HOH A 24 524 524 HOH WAT . C 3 HOH A 25 525 525 HOH WAT . C 3 HOH A 26 526 526 HOH WAT . C 3 HOH A 27 527 527 HOH WAT . C 3 HOH A 28 528 528 HOH WAT . C 3 HOH A 29 529 529 HOH WAT . C 3 HOH A 30 530 530 HOH WAT . C 3 HOH A 31 531 531 HOH WAT . C 3 HOH A 32 532 532 HOH WAT . C 3 HOH A 33 533 533 HOH WAT . C 3 HOH A 34 534 534 HOH WAT . C 3 HOH A 35 535 535 HOH WAT . C 3 HOH A 36 536 536 HOH WAT . C 3 HOH A 37 537 537 HOH WAT . C 3 HOH A 38 538 538 HOH WAT . C 3 HOH A 39 539 539 HOH WAT . C 3 HOH A 40 540 540 HOH WAT . C 3 HOH A 41 541 541 HOH WAT . C 3 HOH A 42 542 542 HOH WAT . C 3 HOH A 43 543 543 HOH WAT . C 3 HOH A 44 544 544 HOH WAT . C 3 HOH A 45 545 545 HOH WAT . C 3 HOH A 46 546 546 HOH WAT . C 3 HOH A 47 547 547 HOH WAT . C 3 HOH A 48 548 548 HOH WAT . C 3 HOH A 49 549 549 HOH WAT . C 3 HOH A 50 550 550 HOH WAT . C 3 HOH A 51 551 551 HOH WAT . C 3 HOH A 52 552 552 HOH WAT . C 3 HOH A 53 553 553 HOH WAT . C 3 HOH A 54 554 554 HOH WAT . C 3 HOH A 55 555 555 HOH WAT . C 3 HOH A 56 556 556 HOH WAT . C 3 HOH A 57 557 557 HOH WAT . C 3 HOH A 58 558 558 HOH WAT . C 3 HOH A 59 559 559 HOH WAT . C 3 HOH A 60 560 560 HOH WAT . C 3 HOH A 61 561 561 HOH WAT . C 3 HOH A 62 562 562 HOH WAT . C 3 HOH A 63 563 563 HOH WAT . C 3 HOH A 64 564 564 HOH WAT . C 3 HOH A 65 565 565 HOH WAT . C 3 HOH A 66 566 566 HOH WAT . C 3 HOH A 67 567 567 HOH WAT . C 3 HOH A 68 568 568 HOH WAT . C 3 HOH A 69 569 569 HOH WAT . C 3 HOH A 70 570 570 HOH WAT . C 3 HOH A 71 571 571 HOH WAT . C 3 HOH A 72 572 572 HOH WAT . C 3 HOH A 73 573 573 HOH WAT . C 3 HOH A 74 574 574 HOH WAT . C 3 HOH A 75 575 575 HOH WAT . C 3 HOH A 76 576 576 HOH WAT . C 3 HOH A 77 577 577 HOH WAT . C 3 HOH A 78 578 578 HOH WAT . C 3 HOH A 79 579 579 HOH WAT . C 3 HOH A 80 580 580 HOH WAT . C 3 HOH A 81 581 581 HOH WAT . C 3 HOH A 82 582 582 HOH WAT . C 3 HOH A 83 583 583 HOH WAT . C 3 HOH A 84 584 584 HOH WAT . C 3 HOH A 85 585 585 HOH WAT . C 3 HOH A 86 586 586 HOH WAT . C 3 HOH A 87 587 587 HOH WAT . C 3 HOH A 88 588 588 HOH WAT . C 3 HOH A 89 589 589 HOH WAT . C 3 HOH A 90 590 590 HOH WAT . C 3 HOH A 91 591 591 HOH WAT . C 3 HOH A 92 592 592 HOH WAT . C 3 HOH A 93 593 593 HOH WAT . C 3 HOH A 94 594 594 HOH WAT . C 3 HOH A 95 595 595 HOH WAT . C 3 HOH A 96 596 596 HOH WAT . C 3 HOH A 97 597 597 HOH WAT . C 3 HOH A 98 598 598 HOH WAT . C 3 HOH A 99 599 599 HOH WAT . C 3 HOH A 100 600 600 HOH WAT . C 3 HOH A 101 601 601 HOH WAT . C 3 HOH A 102 602 602 HOH WAT . C 3 HOH A 103 603 603 HOH WAT . C 3 HOH A 104 604 604 HOH WAT . C 3 HOH A 105 605 605 HOH WAT . C 3 HOH A 106 606 606 HOH WAT . C 3 HOH A 107 607 607 HOH WAT . C 3 HOH A 108 608 608 HOH WAT . C 3 HOH A 109 609 609 HOH WAT . C 3 HOH A 110 610 610 HOH WAT . C 3 HOH A 111 611 611 HOH WAT . C 3 HOH A 112 612 612 HOH WAT . C 3 HOH A 113 613 613 HOH WAT . C 3 HOH A 114 614 614 HOH WAT . C 3 HOH A 115 615 615 HOH WAT . C 3 HOH A 116 616 616 HOH WAT . C 3 HOH A 117 617 617 HOH WAT . C 3 HOH A 118 618 618 HOH WAT . C 3 HOH A 119 619 619 HOH WAT . C 3 HOH A 120 620 620 HOH WAT . C 3 HOH A 121 621 621 HOH WAT . C 3 HOH A 122 622 622 HOH WAT . C 3 HOH A 123 623 623 HOH WAT . C 3 HOH A 124 624 624 HOH WAT . C 3 HOH A 125 625 625 HOH WAT . C 3 HOH A 126 626 626 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PLP . . . B 2 -4.621 13.001 65.017 1 11.94 ? N1 PLP 413 A 1 HETATM 2 C C2 PLP . . . B 2 -4.31 11.987 64.141 1 14.7 ? C2 PLP 413 A 1 HETATM 3 C C2A PLP . . . B 2 -4.535 10.524 64.56 1 10.7 ? C2A PLP 413 A 1 HETATM 4 C C3 PLP . . . B 2 -3.809 12.293 62.911 1 15.17 ? C3 PLP 413 A 1 HETATM 5 O O3 PLP . . . B 2 -3.49 11.291 62.023 1 17.46 ? O3 PLP 413 A 1 HETATM 6 C C4 PLP . . . B 2 -3.629 13.635 62.569 1 13.06 ? C4 PLP 413 A 1 HETATM 7 C C4A PLP . . . B 2 -3.069 13.977 61.183 1 8.4 ? C4A PLP 413 A 1 HETATM 8 C C5 PLP . . . B 2 -3.972 14.65 63.499 1 14.17 ? C5 PLP 413 A 1 HETATM 9 C C6 PLP . . . B 2 -4.458 14.312 64.707 1 11.15 ? C6 PLP 413 A 1 HETATM 10 C C5A PLP . . . B 2 -3.818 16.117 63.156 1 7.69 ? C5A PLP 413 A 1 HETATM 11 O O4P PLP . . . B 2 -2.633 16.543 62.55 1 14.06 ? O4P PLP 413 A 1 HETATM 12 P P PLP . . . B 2 -2.419 18.001 62.027 1 7.46 ? P PLP 413 A 1 HETATM 13 O O1P PLP . . . B 2 -3.351 18.117 60.904 1 7.89 ? O1P PLP 413 A 1 HETATM 14 O O2P PLP . . . B 2 -0.931 17.855 61.515 1 7.03 ? O2P PLP 413 A 1 HETATM 15 O O3P PLP . . . B 2 -2.523 18.972 63.113 1 15.75 ? O3P PLP 413 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #