data_1EUB # _model_server_result.job_id fj91hRFsVNxoL2VoLs-yUg _model_server_result.datetime_utc '2025-03-09 03:56:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1eub # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2}' # _entry.id 1EUB # _exptl.entry_id 1EUB _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 93.126 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-METHYLPYRIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EUB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EUB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F NA HAV . A HAV 1 1_555 G CB 3MP . A 3MP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.48 ? covale ? covale2 F NA HAV . A HAV 1 1_555 H S MSB . A MSB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.639 ? metalc ? metalc1 A O ASP 59 A ASP 162 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc2 A NE2 HIS 69 A HIS 172 1_555 B ZN ZN . A ZN 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc3 A OD1 ASP 76 A ASP 179 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc4 A O GLY 77 A GLY 180 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc5 A O SER 79 A SER 182 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc6 A O LEU 81 A LEU 184 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc7 A NE2 HIS 84 A HIS 187 1_555 B ZN ZN . A ZN 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc8 A O ASN 91 A ASN 194 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc9 A N TYR 92 A TYR 195 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.379 ? metalc ? metalc10 A O GLY 93 A GLY 196 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc11 A N GLY 93 A GLY 196 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? metalc ? metalc12 A OD1 ASP 95 A ASP 198 1_555 D CA CA . A CA 277 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc13 A ND1 HIS 97 A HIS 200 1_555 B ZN ZN . A ZN 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc14 A OD2 ASP 99 A ASP 202 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc15 A OE2 GLU 102 A GLU 205 1_555 E CA CA . A CA 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc16 A NE2 HIS 119 A HIS 222 1_555 C ZN ZN . A ZN 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc17 A NE2 HIS 123 A HIS 226 1_555 C ZN ZN . A ZN 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc18 A NE2 HIS 129 A HIS 232 1_555 C ZN ZN . A ZN 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc19 A O MET 137 A MET 240 1_555 C ZN ZN . A ZN 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? # _chem_comp.formula 'C6 H7 N' _chem_comp.formula_weight 93.126 _chem_comp.id 3MP _chem_comp.mon_nstd_flag . _chem_comp.name 3-METHYLPYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CB CG 3MP sing 1 n n CB HB1 3MP sing 2 n n CB HB2 3MP sing 3 n n CB HB3 3MP sing 4 n n CG CD1 3MP doub 5 n y CG CD2 3MP sing 6 n y CD1 CE1 3MP sing 7 n y CD1 HD1 3MP sing 8 n n CD2 NE2 3MP doub 9 n y CD2 HD2 3MP sing 10 n n CE1 CZ 3MP doub 11 n y CE1 HE1 3MP sing 12 n n CZ NE2 3MP sing 13 n y CZ HZ 3MP sing 14 n n # _atom_sites.entry_id 1EUB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 275 275 ZN ZN . C 2 ZN A 1 276 276 ZN ZN . D 3 CA A 1 277 277 CA CA . E 3 CA A 1 278 278 CA CA . F 4 HAV A 1 1 1 HAV HAV . G 5 3MP A 1 2 2 3MP 3MP . H 6 MSB A 1 3 3 MSB MSB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CB 3MP . . . G 5 3.535 -1.583 -1.951 1 0 ? CB 3MP 2 A 1 HETATM 2 C CG 3MP . . . G 5 3.385 -2.627 -0.88 1 0 ? CG 3MP 2 A 1 HETATM 3 C CD1 3MP . . . G 5 2.929 -2.271 0.377 1 0 ? CD1 3MP 2 A 1 HETATM 4 C CD2 3MP . . . G 5 3.692 -3.963 -1.142 1 0 ? CD2 3MP 2 A 1 HETATM 5 C CE1 3MP . . . G 5 2.796 -3.264 1.331 1 0 ? CE1 3MP 2 A 1 HETATM 6 C CZ 3MP . . . G 5 3.129 -4.582 0.99 1 0 ? CZ 3MP 2 A 1 HETATM 7 N NE2 3MP . . . G 5 3.569 -4.935 -0.227 1 0 ? NE2 3MP 2 A 1 HETATM 8 H HB1 3MP . . . G 5 3.903 -2.039 -2.851 1 0 ? HB1 3MP 2 A 1 HETATM 9 H HB2 3MP . . . G 5 4.216 -0.825 -1.621 1 0 ? HB2 3MP 2 A 1 HETATM 10 H HD1 3MP . . . G 5 2.681 -1.244 0.606 1 0 ? HD1 3MP 2 A 1 HETATM 11 H HD2 3MP . . . G 5 4.04 -4.222 -2.13 1 0 ? HD2 3MP 2 A 1 HETATM 12 H HE1 3MP . . . G 5 2.44 -3.025 2.319 1 0 ? HE1 3MP 2 A 1 HETATM 13 H HZ 3MP . . . G 5 3.021 -5.351 1.741 1 0 ? HZ 3MP 2 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 5576 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #