data_1EUE # _model_server_result.job_id xKQjYo1wORtPq6-GYd8Ojg _model_server_result.datetime_utc '2024-10-19 11:46:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1eue # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 1EUE # _exptl.entry_id 1EUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EUE _cell.length_a 46.23 _cell.length_b 70.77 _cell.length_c 72.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 39 A HIS 39 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc2 A NE2 HIS 63 A HIS 63 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 B NE2 HIS 39 B HIS 39 1_555 D FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc4 B NE2 HIS 63 B HIS 63 1_555 D FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 116 n n CHA C4D HEM doub 117 n n CHA HHA HEM sing 118 n n CHB C4A HEM sing 119 n n CHB C1B HEM doub 120 n n CHB HHB HEM sing 121 n n CHC C4B HEM sing 122 n n CHC C1C HEM doub 123 n n CHC HHC HEM sing 124 n n CHD C4C HEM doub 125 n n CHD C1D HEM sing 126 n n CHD HHD HEM sing 127 n n C1A C2A HEM doub 128 n y C1A NA HEM sing 129 n y C2A C3A HEM sing 130 n y C2A CAA HEM sing 131 n n C3A C4A HEM doub 132 n y C3A CMA HEM sing 133 n n C4A NA HEM sing 134 n y CMA HMA HEM sing 135 n n CMA HMAA HEM sing 136 n n CMA HMAB HEM sing 137 n n CAA CBA HEM sing 138 n n CAA HAA HEM sing 139 n n CAA HAAA HEM sing 140 n n CBA CGA HEM sing 141 n n CBA HBA HEM sing 142 n n CBA HBAA HEM sing 143 n n CGA O1A HEM doub 144 n n CGA O2A HEM sing 145 n n C1B C2B HEM sing 146 n n C1B NB HEM sing 147 n n C2B C3B HEM doub 148 n n C2B CMB HEM sing 149 n n C3B C4B HEM sing 150 n n C3B CAB HEM sing 151 n n C4B NB HEM doub 152 n n CMB HMB HEM sing 153 n n CMB HMBA HEM sing 154 n n CMB HMBB HEM sing 155 n n CAB CBB HEM doub 156 n n CAB HAB HEM sing 157 n n CBB HBB HEM sing 158 n n CBB HBBA HEM sing 159 n n C1C C2C HEM sing 160 n y C1C NC HEM sing 161 n y C2C C3C HEM doub 162 n y C2C CMC HEM sing 163 n n C3C C4C HEM sing 164 n y C3C CAC HEM sing 165 n n C4C NC HEM sing 166 n y CMC HMC HEM sing 167 n n CMC HMCA HEM sing 168 n n CMC HMCB HEM sing 169 n n CAC CBC HEM doub 170 n n CAC HAC HEM sing 171 n n CBC HBC HEM sing 172 n n CBC HBCA HEM sing 173 n n C1D C2D HEM sing 174 n n C1D ND HEM doub 175 n n C2D C3D HEM doub 176 n n C2D CMD HEM sing 177 n n C3D C4D HEM sing 178 n n C3D CAD HEM sing 179 n n C4D ND HEM sing 180 n n CMD HMD HEM sing 181 n n CMD HMDA HEM sing 182 n n CMD HMDB HEM sing 183 n n CAD CBD HEM sing 184 n n CAD HAD HEM sing 185 n n CAD HADA HEM sing 186 n n CBD CGD HEM sing 187 n n CBD HBD HEM sing 188 n n CBD HBDA HEM sing 189 n n CGD O1D HEM doub 190 n n CGD O2D HEM sing 191 n n O2A H2A HEM sing 192 n n O2D H2D HEM sing 193 n n FE NA HEM sing 194 n n FE NB HEM sing 195 n n FE NC HEM sing 196 n n FE ND HEM sing 197 n n # _atom_sites.entry_id 1EUE _atom_sites.fract_transf_matrix[1][1] 0.021631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 201 HEM HEM . D 2 HEM B 1 201 201 HEM HEM . E 3 HOH A 1 202 4 HOH TIP . E 3 HOH A 2 203 6 HOH TIP . E 3 HOH A 3 204 8 HOH TIP . E 3 HOH A 4 205 10 HOH TIP . E 3 HOH A 5 206 13 HOH TIP . E 3 HOH A 6 207 15 HOH TIP . E 3 HOH A 7 208 16 HOH TIP . E 3 HOH A 8 209 17 HOH TIP . E 3 HOH A 9 210 18 HOH TIP . E 3 HOH A 10 211 19 HOH TIP . E 3 HOH A 11 212 21 HOH TIP . E 3 HOH A 12 213 25 HOH TIP . E 3 HOH A 13 214 27 HOH TIP . E 3 HOH A 14 215 30 HOH TIP . E 3 HOH A 15 216 31 HOH TIP . E 3 HOH A 16 217 33 HOH TIP . E 3 HOH A 17 218 36 HOH TIP . E 3 HOH A 18 219 38 HOH TIP . E 3 HOH A 19 220 40 HOH TIP . E 3 HOH A 20 221 41 HOH TIP . E 3 HOH A 21 222 42 HOH TIP . E 3 HOH A 22 223 43 HOH TIP . E 3 HOH A 23 224 44 HOH TIP . E 3 HOH A 24 225 45 HOH TIP . E 3 HOH A 25 226 46 HOH TIP . E 3 HOH A 26 227 48 HOH TIP . E 3 HOH A 27 228 49 HOH TIP . E 3 HOH A 28 229 50 HOH TIP . E 3 HOH A 29 230 54 HOH TIP . E 3 HOH A 30 231 56 HOH TIP . E 3 HOH A 31 232 59 HOH TIP . E 3 HOH A 32 233 61 HOH TIP . E 3 HOH A 33 234 62 HOH TIP . E 3 HOH A 34 235 65 HOH TIP . E 3 HOH A 35 236 67 HOH TIP . E 3 HOH A 36 237 69 HOH TIP . E 3 HOH A 37 238 70 HOH TIP . E 3 HOH A 38 239 71 HOH TIP . E 3 HOH A 39 240 72 HOH TIP . E 3 HOH A 40 241 73 HOH TIP . E 3 HOH A 41 242 74 HOH TIP . E 3 HOH A 42 243 76 HOH TIP . E 3 HOH A 43 244 77 HOH TIP . E 3 HOH A 44 245 80 HOH TIP . E 3 HOH A 45 246 81 HOH TIP . E 3 HOH A 46 247 83 HOH TIP . E 3 HOH A 47 248 87 HOH TIP . E 3 HOH A 48 249 88 HOH TIP . F 3 HOH B 1 202 1 HOH TIP . F 3 HOH B 2 203 2 HOH TIP . F 3 HOH B 3 204 3 HOH TIP . F 3 HOH B 4 205 5 HOH TIP . F 3 HOH B 5 206 7 HOH TIP . F 3 HOH B 6 207 9 HOH TIP . F 3 HOH B 7 208 11 HOH TIP . F 3 HOH B 8 209 12 HOH TIP . F 3 HOH B 9 210 14 HOH TIP . F 3 HOH B 10 211 20 HOH TIP . F 3 HOH B 11 212 22 HOH TIP . F 3 HOH B 12 213 23 HOH TIP . F 3 HOH B 13 214 24 HOH TIP . F 3 HOH B 14 215 26 HOH TIP . F 3 HOH B 15 216 28 HOH TIP . F 3 HOH B 16 217 29 HOH TIP . F 3 HOH B 17 218 32 HOH TIP . F 3 HOH B 18 219 34 HOH TIP . F 3 HOH B 19 220 35 HOH TIP . F 3 HOH B 20 221 37 HOH TIP . F 3 HOH B 21 222 39 HOH TIP . F 3 HOH B 22 223 47 HOH TIP . F 3 HOH B 23 224 51 HOH TIP . F 3 HOH B 24 225 52 HOH TIP . F 3 HOH B 25 226 53 HOH TIP . F 3 HOH B 26 227 55 HOH TIP . F 3 HOH B 27 228 57 HOH TIP . F 3 HOH B 28 229 58 HOH TIP . F 3 HOH B 29 230 60 HOH TIP . F 3 HOH B 30 231 63 HOH TIP . F 3 HOH B 31 232 64 HOH TIP . F 3 HOH B 32 233 66 HOH TIP . F 3 HOH B 33 234 68 HOH TIP . F 3 HOH B 34 235 75 HOH TIP . F 3 HOH B 35 236 78 HOH TIP . F 3 HOH B 36 237 79 HOH TIP . F 3 HOH B 37 238 82 HOH TIP . F 3 HOH B 38 239 84 HOH TIP . F 3 HOH B 39 240 85 HOH TIP . F 3 HOH B 40 241 86 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 2 37.731 38.125 62.821 1 28.12 ? CHA HEM 201 A 1 HETATM 2 C CHB HEM . . . C 2 37.813 33.971 60.328 1 26.31 ? CHB HEM 201 A 1 HETATM 3 C CHC HEM . . . C 2 35.836 31.613 64.052 1 23.18 ? CHC HEM 201 A 1 HETATM 4 C CHD HEM . . . C 2 35.855 35.726 66.596 1 24.62 ? CHD HEM 201 A 1 HETATM 5 C C1A HEM . . . C 2 37.891 37.205 61.795 1 28.31 ? C1A HEM 201 A 1 HETATM 6 C C2A HEM . . . C 2 38.326 37.526 60.489 1 30.57 ? C2A HEM 201 A 1 HETATM 7 C C3A HEM . . . C 2 38.374 36.35 59.78 1 29.69 ? C3A HEM 201 A 1 HETATM 8 C C4A HEM . . . C 2 37.938 35.305 60.663 1 27.05 ? C4A HEM 201 A 1 HETATM 9 C CMA HEM . . . C 2 38.77 36.206 58.427 1 28.92 ? CMA HEM 201 A 1 HETATM 10 C CAA HEM . . . C 2 38.666 38.945 59.96 1 35.37 ? CAA HEM 201 A 1 HETATM 11 C CBA HEM . . . C 2 37.337 39.666 59.568 1 44.98 ? CBA HEM 201 A 1 HETATM 12 C CGA HEM . . . C 2 37.457 41.07 59.033 1 53.93 ? CGA HEM 201 A 1 HETATM 13 O O1A HEM . . . C 2 36.621 41.936 59.46 1 57.27 ? O1A HEM 201 A 1 HETATM 14 O O2A HEM . . . C 2 38.364 41.314 58.163 1 58.48 ? O2A HEM 201 A 1 HETATM 15 C C1B HEM . . . C 2 37.308 32.999 61.153 1 24.97 ? C1B HEM 201 A 1 HETATM 16 C C2B HEM . . . C 2 37.181 31.623 60.759 1 26.3 ? C2B HEM 201 A 1 HETATM 17 C C3B HEM . . . C 2 36.635 30.921 61.765 1 26.66 ? C3B HEM 201 A 1 HETATM 18 C C4B HEM . . . C 2 36.421 31.913 62.822 1 25.79 ? C4B HEM 201 A 1 HETATM 19 C CMB HEM . . . C 2 37.6 31.084 59.4 1 25.87 ? CMB HEM 201 A 1 HETATM 20 C CAB HEM . . . C 2 36.329 29.476 61.737 1 29.47 ? CAB HEM 201 A 1 HETATM 21 C CBB HEM . . . C 2 37.047 28.638 62.776 1 35.02 ? CBB HEM 201 A 1 HETATM 22 C C1C HEM . . . C 2 35.62 32.517 65.046 1 25.43 ? C1C HEM 201 A 1 HETATM 23 C C2C HEM . . . C 2 35.013 32.209 66.331 1 25.94 ? C2C HEM 201 A 1 HETATM 24 C C3C HEM . . . C 2 35.031 33.345 67.075 1 27.11 ? C3C HEM 201 A 1 HETATM 25 C C4C HEM . . . C 2 35.645 34.376 66.226 1 25.55 ? C4C HEM 201 A 1 HETATM 26 C CMC HEM . . . C 2 34.452 30.863 66.804 1 28.84 ? CMC HEM 201 A 1 HETATM 27 C CAC HEM . . . C 2 34.524 33.507 68.495 1 31.43 ? CAC HEM 201 A 1 HETATM 28 C CBC HEM . . . C 2 33.524 34.32 68.894 1 39.99 ? CBC HEM 201 A 1 HETATM 29 C C1D HEM . . . C 2 36.389 36.727 65.793 1 27.99 ? C1D HEM 201 A 1 HETATM 30 C C2D HEM . . . C 2 36.57 38.112 66.224 1 29.01 ? C2D HEM 201 A 1 HETATM 31 C C3D HEM . . . C 2 37.092 38.812 65.161 1 30.84 ? C3D HEM 201 A 1 HETATM 32 C C4D HEM . . . C 2 37.237 37.821 64.086 1 30.3 ? C4D HEM 201 A 1 HETATM 33 C CMD HEM . . . C 2 36.237 38.683 67.597 1 29.24 ? CMD HEM 201 A 1 HETATM 34 C CAD HEM . . . C 2 37.448 40.32 65.107 1 35 ? CAD HEM 201 A 1 HETATM 35 C CBD HEM . . . C 2 36.338 41.153 64.41 1 43.97 ? CBD HEM 201 A 1 HETATM 36 C CGD HEM . . . C 2 36.531 42.64 64.585 1 49.02 ? CGD HEM 201 A 1 HETATM 37 O O1D HEM . . . C 2 37.535 43.172 64.043 1 53.02 ? O1D HEM 201 A 1 HETATM 38 O O2D HEM . . . C 2 35.68 43.257 65.285 1 52.84 ? O2D HEM 201 A 1 HETATM 39 N NA HEM . . . C 2 37.607 35.834 61.907 1 27.81 ? NA HEM 201 A 1 HETATM 40 N NB HEM . . . C 2 36.854 33.196 62.436 1 23.82 ? NB HEM 201 A 1 HETATM 41 N NC HEM . . . C 2 35.996 33.865 64.965 1 25.7 ? NC HEM 201 A 1 HETATM 42 N ND HEM . . . C 2 36.815 36.533 64.48 1 28.22 ? ND HEM 201 A 1 HETATM 43 FE FE HEM . . . C 2 36.816 34.861 63.453 1 27.01 ? FE HEM 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 43 #