data_1EUS # _model_server_result.job_id n4pejgWwL5J0VhxnnlWc1A _model_server_result.datetime_utc '2024-11-07 13:04:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1eus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 1EUS # _exptl.entry_id 1EUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 291.255 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EUS _cell.length_a 48 _cell.length_b 82.86 _cell.length_c 84.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H17 N O8' _chem_comp.formula_weight 291.255 _chem_comp.id DAN _chem_comp.mon_nstd_flag . _chem_comp.name '2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms Neu5Ac2en # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DAN sing 83 n n C1 O1A DAN doub 84 n n C1 O1B DAN sing 85 n n C2 C3 DAN doub 86 n n C2 O6 DAN sing 87 n n C3 C4 DAN sing 88 n n C3 H3 DAN sing 89 n n C4 C5 DAN sing 90 n n C4 O4 DAN sing 91 n n C4 H4 DAN sing 92 n n C5 C6 DAN sing 93 n n C5 N5 DAN sing 94 n n C5 H5 DAN sing 95 n n C6 C7 DAN sing 96 n n C6 O6 DAN sing 97 n n C6 H6 DAN sing 98 n n C7 C8 DAN sing 99 n n C7 O7 DAN sing 100 n n C7 H7 DAN sing 101 n n C8 C9 DAN sing 102 n n C8 O8 DAN sing 103 n n C8 H8 DAN sing 104 n n C9 O9 DAN sing 105 n n C9 H91 DAN sing 106 n n C9 H92 DAN sing 107 n n C10 C11 DAN sing 108 n n C10 N5 DAN sing 109 n n C10 O10 DAN doub 110 n n C11 H111 DAN sing 111 n n C11 H112 DAN sing 112 n n C11 H113 DAN sing 113 n n N5 HN5 DAN sing 114 n n O1B HO1B DAN sing 115 n n O4 HO4 DAN sing 116 n n O7 HO7 DAN sing 117 n n O8 HO8 DAN sing 118 n n O9 HO9 DAN sing 119 n n # _atom_sites.entry_id 1EUS _atom_sites.fract_transf_matrix[1][1] 0.020833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DAN A 1 800 800 DAN DAN . C 3 HOH A 1 501 501 HOH HOH . C 3 HOH A 2 502 502 HOH HOH . C 3 HOH A 3 503 503 HOH HOH . C 3 HOH A 4 504 504 HOH HOH . C 3 HOH A 5 505 505 HOH HOH . C 3 HOH A 6 506 506 HOH HOH . C 3 HOH A 7 507 507 HOH HOH . C 3 HOH A 8 508 508 HOH HOH . C 3 HOH A 9 509 509 HOH HOH . C 3 HOH A 10 510 510 HOH HOH . C 3 HOH A 11 511 511 HOH HOH . C 3 HOH A 12 512 512 HOH HOH . C 3 HOH A 13 513 513 HOH HOH . C 3 HOH A 14 514 514 HOH HOH . C 3 HOH A 15 515 515 HOH HOH . C 3 HOH A 16 516 516 HOH HOH . C 3 HOH A 17 517 517 HOH HOH . C 3 HOH A 18 518 518 HOH HOH . C 3 HOH A 19 519 519 HOH HOH . C 3 HOH A 20 520 520 HOH HOH . C 3 HOH A 21 521 521 HOH HOH . C 3 HOH A 22 522 522 HOH HOH . C 3 HOH A 23 523 523 HOH HOH . C 3 HOH A 24 524 524 HOH HOH . C 3 HOH A 25 525 525 HOH HOH . C 3 HOH A 26 526 526 HOH HOH . C 3 HOH A 27 527 527 HOH HOH . C 3 HOH A 28 528 528 HOH HOH . C 3 HOH A 29 529 529 HOH HOH . C 3 HOH A 30 530 530 HOH HOH . C 3 HOH A 31 531 531 HOH HOH . C 3 HOH A 32 532 532 HOH HOH . C 3 HOH A 33 533 533 HOH HOH . C 3 HOH A 34 534 534 HOH HOH . C 3 HOH A 35 535 535 HOH HOH . C 3 HOH A 36 536 536 HOH HOH . C 3 HOH A 37 537 537 HOH HOH . C 3 HOH A 38 538 538 HOH HOH . C 3 HOH A 39 539 539 HOH HOH . C 3 HOH A 40 540 540 HOH HOH . C 3 HOH A 41 541 541 HOH HOH . C 3 HOH A 42 542 542 HOH HOH . C 3 HOH A 43 543 543 HOH HOH . C 3 HOH A 44 544 544 HOH HOH . C 3 HOH A 45 545 545 HOH HOH . C 3 HOH A 46 546 546 HOH HOH . C 3 HOH A 47 547 547 HOH HOH . C 3 HOH A 48 548 548 HOH HOH . C 3 HOH A 49 549 549 HOH HOH . C 3 HOH A 50 550 550 HOH HOH . C 3 HOH A 51 551 551 HOH HOH . C 3 HOH A 52 552 552 HOH HOH . C 3 HOH A 53 553 553 HOH HOH . C 3 HOH A 54 554 554 HOH HOH . C 3 HOH A 55 555 555 HOH HOH . C 3 HOH A 56 556 556 HOH HOH . C 3 HOH A 57 557 557 HOH HOH . C 3 HOH A 58 558 558 HOH HOH . C 3 HOH A 59 559 559 HOH HOH . C 3 HOH A 60 560 560 HOH HOH . C 3 HOH A 61 561 561 HOH HOH . C 3 HOH A 62 562 562 HOH HOH . C 3 HOH A 63 563 563 HOH HOH . C 3 HOH A 64 564 564 HOH HOH . C 3 HOH A 65 565 565 HOH HOH . C 3 HOH A 66 566 566 HOH HOH . C 3 HOH A 67 567 567 HOH HOH . C 3 HOH A 68 568 568 HOH HOH . C 3 HOH A 69 569 569 HOH HOH . C 3 HOH A 70 570 570 HOH HOH . C 3 HOH A 71 571 571 HOH HOH . C 3 HOH A 72 572 572 HOH HOH . C 3 HOH A 73 573 573 HOH HOH . C 3 HOH A 74 575 575 HOH HOH . C 3 HOH A 75 576 576 HOH HOH . C 3 HOH A 76 577 577 HOH HOH . C 3 HOH A 77 578 578 HOH HOH . C 3 HOH A 78 579 579 HOH HOH . C 3 HOH A 79 580 580 HOH HOH . C 3 HOH A 80 581 581 HOH HOH . C 3 HOH A 81 582 582 HOH HOH . C 3 HOH A 82 583 583 HOH HOH . C 3 HOH A 83 584 584 HOH HOH . C 3 HOH A 84 585 585 HOH HOH . C 3 HOH A 85 586 586 HOH HOH . C 3 HOH A 86 587 587 HOH HOH . C 3 HOH A 87 588 588 HOH HOH . C 3 HOH A 88 589 589 HOH HOH . C 3 HOH A 89 591 591 HOH HOH . C 3 HOH A 90 592 592 HOH HOH . C 3 HOH A 91 593 593 HOH HOH . C 3 HOH A 92 594 594 HOH HOH . C 3 HOH A 93 595 595 HOH HOH . C 3 HOH A 94 596 596 HOH HOH . C 3 HOH A 95 597 597 HOH HOH . C 3 HOH A 96 598 598 HOH HOH . C 3 HOH A 97 599 599 HOH HOH . C 3 HOH A 98 600 600 HOH HOH . C 3 HOH A 99 601 601 HOH HOH . C 3 HOH A 100 602 602 HOH HOH . C 3 HOH A 101 603 603 HOH HOH . C 3 HOH A 102 604 604 HOH HOH . C 3 HOH A 103 605 605 HOH HOH . C 3 HOH A 104 606 606 HOH HOH . C 3 HOH A 105 607 607 HOH HOH . C 3 HOH A 106 608 608 HOH HOH . C 3 HOH A 107 609 609 HOH HOH . C 3 HOH A 108 610 610 HOH HOH . C 3 HOH A 109 611 611 HOH HOH . C 3 HOH A 110 612 612 HOH HOH . C 3 HOH A 111 613 613 HOH HOH . C 3 HOH A 112 614 614 HOH HOH . C 3 HOH A 113 615 615 HOH HOH . C 3 HOH A 114 616 616 HOH HOH . C 3 HOH A 115 617 617 HOH HOH . C 3 HOH A 116 618 618 HOH HOH . C 3 HOH A 117 619 619 HOH HOH . C 3 HOH A 118 620 620 HOH HOH . C 3 HOH A 119 621 621 HOH HOH . C 3 HOH A 120 622 622 HOH HOH . C 3 HOH A 121 623 623 HOH HOH . C 3 HOH A 122 624 624 HOH HOH . C 3 HOH A 123 625 625 HOH HOH . C 3 HOH A 124 627 627 HOH HOH . C 3 HOH A 125 628 628 HOH HOH . C 3 HOH A 126 629 629 HOH HOH . C 3 HOH A 127 630 630 HOH HOH . C 3 HOH A 128 631 631 HOH HOH . C 3 HOH A 129 632 632 HOH HOH . C 3 HOH A 130 633 633 HOH HOH . C 3 HOH A 131 634 634 HOH HOH . C 3 HOH A 132 635 635 HOH HOH . C 3 HOH A 133 637 637 HOH HOH . C 3 HOH A 134 638 638 HOH HOH . C 3 HOH A 135 639 639 HOH HOH . C 3 HOH A 136 640 640 HOH HOH . C 3 HOH A 137 641 641 HOH HOH . C 3 HOH A 138 642 642 HOH HOH . C 3 HOH A 139 643 643 HOH HOH . C 3 HOH A 140 644 644 HOH HOH . C 3 HOH A 141 645 645 HOH HOH . C 3 HOH A 142 646 646 HOH HOH . C 3 HOH A 143 647 647 HOH HOH . C 3 HOH A 144 648 648 HOH HOH . C 3 HOH A 145 649 649 HOH HOH . C 3 HOH A 146 650 650 HOH HOH . C 3 HOH A 147 651 651 HOH HOH . C 3 HOH A 148 652 652 HOH HOH . C 3 HOH A 149 653 653 HOH HOH . C 3 HOH A 150 654 654 HOH HOH . C 3 HOH A 151 655 655 HOH HOH . C 3 HOH A 152 656 656 HOH HOH . C 3 HOH A 153 657 657 HOH HOH . C 3 HOH A 154 658 658 HOH HOH . C 3 HOH A 155 659 659 HOH HOH . C 3 HOH A 156 660 660 HOH HOH . C 3 HOH A 157 661 661 HOH HOH . C 3 HOH A 158 663 663 HOH HOH . C 3 HOH A 159 664 664 HOH HOH . C 3 HOH A 160 665 665 HOH HOH . C 3 HOH A 161 666 666 HOH HOH . C 3 HOH A 162 667 667 HOH HOH . C 3 HOH A 163 668 668 HOH HOH . C 3 HOH A 164 669 669 HOH HOH . C 3 HOH A 165 670 670 HOH HOH . C 3 HOH A 166 671 671 HOH HOH . C 3 HOH A 167 672 672 HOH HOH . C 3 HOH A 168 673 673 HOH HOH . C 3 HOH A 169 674 674 HOH HOH . C 3 HOH A 170 675 675 HOH HOH . C 3 HOH A 171 676 676 HOH HOH . C 3 HOH A 172 677 677 HOH HOH . C 3 HOH A 173 678 678 HOH HOH . C 3 HOH A 174 679 679 HOH HOH . C 3 HOH A 175 680 680 HOH HOH . C 3 HOH A 176 681 681 HOH HOH . C 3 HOH A 177 682 682 HOH HOH . C 3 HOH A 178 683 683 HOH HOH . C 3 HOH A 179 684 684 HOH HOH . C 3 HOH A 180 685 685 HOH HOH . C 3 HOH A 181 686 686 HOH HOH . C 3 HOH A 182 687 687 HOH HOH . C 3 HOH A 183 688 688 HOH HOH . C 3 HOH A 184 689 689 HOH HOH . C 3 HOH A 185 690 690 HOH HOH . C 3 HOH A 186 691 691 HOH HOH . C 3 HOH A 187 692 692 HOH HOH . C 3 HOH A 188 693 693 HOH HOH . C 3 HOH A 189 694 694 HOH HOH . C 3 HOH A 190 695 695 HOH HOH . C 3 HOH A 191 696 696 HOH HOH . C 3 HOH A 192 697 697 HOH HOH . C 3 HOH A 193 698 698 HOH HOH . C 3 HOH A 194 699 699 HOH HOH . C 3 HOH A 195 700 700 HOH HOH . C 3 HOH A 196 701 701 HOH HOH . C 3 HOH A 197 702 702 HOH HOH . C 3 HOH A 198 703 703 HOH HOH . C 3 HOH A 199 704 704 HOH HOH . C 3 HOH A 200 705 705 HOH HOH . C 3 HOH A 201 706 706 HOH HOH . C 3 HOH A 202 707 707 HOH HOH . C 3 HOH A 203 708 708 HOH HOH . C 3 HOH A 204 709 709 HOH HOH . C 3 HOH A 205 710 710 HOH HOH . C 3 HOH A 206 711 711 HOH HOH . C 3 HOH A 207 712 712 HOH HOH . C 3 HOH A 208 713 713 HOH HOH . C 3 HOH A 209 714 714 HOH HOH . C 3 HOH A 210 715 715 HOH HOH . C 3 HOH A 211 716 716 HOH HOH . C 3 HOH A 212 717 717 HOH HOH . C 3 HOH A 213 718 718 HOH HOH . C 3 HOH A 214 719 719 HOH HOH . C 3 HOH A 215 720 720 HOH HOH . C 3 HOH A 216 721 721 HOH HOH . C 3 HOH A 217 722 722 HOH HOH . C 3 HOH A 218 723 723 HOH HOH . C 3 HOH A 219 724 724 HOH HOH . C 3 HOH A 220 725 725 HOH HOH . C 3 HOH A 221 726 726 HOH HOH . C 3 HOH A 222 727 727 HOH HOH . C 3 HOH A 223 728 728 HOH HOH . C 3 HOH A 224 729 729 HOH HOH . C 3 HOH A 225 730 730 HOH HOH . C 3 HOH A 226 731 731 HOH HOH . C 3 HOH A 227 732 732 HOH HOH . C 3 HOH A 228 733 733 HOH HOH . C 3 HOH A 229 734 734 HOH HOH . C 3 HOH A 230 735 735 HOH HOH . C 3 HOH A 231 736 736 HOH HOH . C 3 HOH A 232 737 737 HOH HOH . C 3 HOH A 233 738 738 HOH HOH . C 3 HOH A 234 739 739 HOH HOH . C 3 HOH A 235 740 740 HOH HOH . C 3 HOH A 236 741 741 HOH HOH . C 3 HOH A 237 742 742 HOH HOH . C 3 HOH A 238 743 743 HOH HOH . C 3 HOH A 239 744 744 HOH HOH . C 3 HOH A 240 745 745 HOH HOH . C 3 HOH A 241 746 746 HOH HOH . C 3 HOH A 242 747 747 HOH HOH . C 3 HOH A 243 748 748 HOH HOH . C 3 HOH A 244 749 749 HOH HOH . C 3 HOH A 245 750 750 HOH HOH . C 3 HOH A 246 751 751 HOH HOH . C 3 HOH A 247 752 752 HOH HOH . C 3 HOH A 248 753 753 HOH HOH . C 3 HOH A 249 754 754 HOH HOH . C 3 HOH A 250 755 755 HOH HOH . C 3 HOH A 251 756 756 HOH HOH . C 3 HOH A 252 757 757 HOH HOH . C 3 HOH A 253 758 758 HOH HOH . C 3 HOH A 254 759 759 HOH HOH . C 3 HOH A 255 760 760 HOH HOH . C 3 HOH A 256 761 761 HOH HOH . C 3 HOH A 257 762 762 HOH HOH . C 3 HOH A 258 763 763 HOH HOH . C 3 HOH A 259 764 764 HOH HOH . C 3 HOH A 260 765 765 HOH HOH . C 3 HOH A 261 766 766 HOH HOH . C 3 HOH A 262 767 767 HOH HOH . C 3 HOH A 263 768 768 HOH HOH . C 3 HOH A 264 769 769 HOH HOH . C 3 HOH A 265 770 770 HOH HOH . C 3 HOH A 266 771 771 HOH HOH . C 3 HOH A 267 772 772 HOH HOH . C 3 HOH A 268 773 773 HOH HOH . C 3 HOH A 269 774 774 HOH HOH . C 3 HOH A 270 775 775 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DAN . . . B 2 14.816 48.692 38.59 1 14.96 ? C1 DAN 800 A 1 HETATM 2 C C2 DAN . . . B 2 15.121 48.005 39.798 1 15.41 ? C2 DAN 800 A 1 HETATM 3 C C3 DAN . . . B 2 14.601 48.466 41.005 1 10.29 ? C3 DAN 800 A 1 HETATM 4 C C4 DAN . . . B 2 14.621 47.534 42.233 1 11.91 ? C4 DAN 800 A 1 HETATM 5 C C5 DAN . . . B 2 15.882 46.603 42.219 1 8.99 ? C5 DAN 800 A 1 HETATM 6 C C6 DAN . . . B 2 15.887 45.787 40.899 1 12.46 ? C6 DAN 800 A 1 HETATM 7 C C7 DAN . . . B 2 17.145 44.917 40.513 1 9.36 ? C7 DAN 800 A 1 HETATM 8 C C8 DAN . . . B 2 16.958 44.511 38.978 1 15.55 ? C8 DAN 800 A 1 HETATM 9 C C9 DAN . . . B 2 18.12 43.664 38.258 1 19.58 ? C9 DAN 800 A 1 HETATM 10 C C10 DAN . . . B 2 17.004 45.4 44.008 1 8.5 ? C10 DAN 800 A 1 HETATM 11 C C11 DAN . . . B 2 17.002 44.533 45.26 1 7.7 ? C11 DAN 800 A 1 HETATM 12 N N5 DAN . . . B 2 15.867 45.732 43.404 1 8.3 ? N5 DAN 800 A 1 HETATM 13 O O1A DAN . . . B 2 14.047 49.684 38.521 1 15.23 ? O1A DAN 800 A 1 HETATM 14 O O1B DAN . . . B 2 15.252 48.155 37.537 1 16.48 ? O1B DAN 800 A 1 HETATM 15 O O4 DAN . . . B 2 14.601 48.234 43.484 1 10.12 ? O4 DAN 800 A 1 HETATM 16 O O6 DAN . . . B 2 15.68 46.724 39.781 1 13.09 ? O6 DAN 800 A 1 HETATM 17 O O7 DAN . . . B 2 18.27 45.684 40.757 1 12.39 ? O7 DAN 800 A 1 HETATM 18 O O8 DAN . . . B 2 15.793 43.685 38.962 1 12.64 ? O8 DAN 800 A 1 HETATM 19 O O9 DAN . . . B 2 18.171 42.484 38.809 1 22.12 ? O9 DAN 800 A 1 HETATM 20 O O10 DAN . . . B 2 18.107 45.739 43.564 1 13.24 ? O10 DAN 800 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #