data_1EVJ # _model_server_result.job_id 1ywoajeVQpJ8UtG-eaQ_4w _model_server_result.datetime_utc '2024-11-12 19:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1evj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 1EVJ # _exptl.entry_id 1EVJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 64.53 _cell.angle_beta 84.45 _cell.angle_gamma 75.28 _cell.entry_id 1EVJ _cell.length_a 47.71 _cell.length_b 91.46 _cell.length_c 98.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I,K 1 1 B,D,F,H,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1EVJ _atom_sites.fract_transf_matrix[1][1] 0.02096 _atom_sites.fract_transf_matrix[1][2] -0.005507 _atom_sites.fract_transf_matrix[1][3] 0.000312 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011305 _atom_sites.fract_transf_matrix[2][3] -0.00525 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 500 500 NAD NAD . F 2 NAD B 1 501 501 NAD NAD . G 2 NAD C 1 502 502 NAD NAD . H 2 NAD D 1 503 503 NAD NAD . I 3 HOH A 1 603 603 HOH HOH . I 3 HOH A 2 604 604 HOH HOH . I 3 HOH A 3 605 605 HOH HOH . I 3 HOH A 4 606 606 HOH HOH . I 3 HOH A 5 607 607 HOH HOH . I 3 HOH A 6 609 609 HOH HOH . I 3 HOH A 7 612 612 HOH HOH . I 3 HOH A 8 613 613 HOH HOH . I 3 HOH A 9 614 614 HOH HOH . I 3 HOH A 10 615 615 HOH HOH . I 3 HOH A 11 616 616 HOH HOH . I 3 HOH A 12 617 617 HOH HOH . I 3 HOH A 13 618 618 HOH HOH . I 3 HOH A 14 619 619 HOH HOH . I 3 HOH A 15 620 620 HOH HOH . I 3 HOH A 16 621 621 HOH HOH . I 3 HOH A 17 622 622 HOH HOH . I 3 HOH A 18 623 623 HOH HOH . I 3 HOH A 19 624 624 HOH HOH . I 3 HOH A 20 625 625 HOH HOH . I 3 HOH A 21 626 626 HOH HOH . I 3 HOH A 22 627 627 HOH HOH . I 3 HOH A 23 628 628 HOH HOH . I 3 HOH A 24 629 629 HOH HOH . I 3 HOH A 25 630 630 HOH HOH . I 3 HOH A 26 631 631 HOH HOH . I 3 HOH A 27 632 632 HOH HOH . I 3 HOH A 28 633 633 HOH HOH . I 3 HOH A 29 634 634 HOH HOH . I 3 HOH A 30 635 635 HOH HOH . I 3 HOH A 31 636 636 HOH HOH . I 3 HOH A 32 637 637 HOH HOH . I 3 HOH A 33 647 647 HOH HOH . I 3 HOH A 34 655 655 HOH HOH . I 3 HOH A 35 656 656 HOH HOH . I 3 HOH A 36 657 657 HOH HOH . I 3 HOH A 37 663 663 HOH HOH . I 3 HOH A 38 666 666 HOH HOH . I 3 HOH A 39 672 672 HOH HOH . I 3 HOH A 40 678 678 HOH HOH . I 3 HOH A 41 679 679 HOH HOH . I 3 HOH A 42 681 681 HOH HOH . I 3 HOH A 43 683 683 HOH HOH . I 3 HOH A 44 687 687 HOH HOH . I 3 HOH A 45 692 692 HOH HOH . I 3 HOH A 46 694 694 HOH HOH . I 3 HOH A 47 695 695 HOH HOH . I 3 HOH A 48 703 703 HOH HOH . I 3 HOH A 49 710 710 HOH HOH . I 3 HOH A 50 711 711 HOH HOH . I 3 HOH A 51 713 713 HOH HOH . I 3 HOH A 52 714 714 HOH HOH . J 3 HOH B 1 600 600 HOH HOH . J 3 HOH B 2 638 638 HOH HOH . J 3 HOH B 3 639 639 HOH HOH . J 3 HOH B 4 640 640 HOH HOH . J 3 HOH B 5 641 641 HOH HOH . J 3 HOH B 6 642 642 HOH HOH . J 3 HOH B 7 643 643 HOH HOH . J 3 HOH B 8 662 662 HOH HOH . J 3 HOH B 9 669 669 HOH HOH . J 3 HOH B 10 675 675 HOH HOH . J 3 HOH B 11 680 680 HOH HOH . J 3 HOH B 12 685 685 HOH HOH . J 3 HOH B 13 690 690 HOH HOH . J 3 HOH B 14 701 701 HOH HOH . J 3 HOH B 15 705 705 HOH HOH . J 3 HOH B 16 709 709 HOH HOH . J 3 HOH B 17 716 716 HOH HOH . J 3 HOH B 18 717 717 HOH HOH . J 3 HOH B 19 720 720 HOH HOH . J 3 HOH B 20 721 721 HOH HOH . J 3 HOH B 21 724 724 HOH HOH . K 3 HOH C 1 601 601 HOH HOH . K 3 HOH C 2 602 602 HOH HOH . K 3 HOH C 3 610 610 HOH HOH . K 3 HOH C 4 611 611 HOH HOH . K 3 HOH C 5 644 644 HOH HOH . K 3 HOH C 6 645 645 HOH HOH . K 3 HOH C 7 646 646 HOH HOH . K 3 HOH C 8 648 648 HOH HOH . K 3 HOH C 9 658 658 HOH HOH . K 3 HOH C 10 659 659 HOH HOH . K 3 HOH C 11 660 660 HOH HOH . K 3 HOH C 12 664 664 HOH HOH . K 3 HOH C 13 665 665 HOH HOH . K 3 HOH C 14 667 667 HOH HOH . K 3 HOH C 15 668 668 HOH HOH . K 3 HOH C 16 670 670 HOH HOH . K 3 HOH C 17 671 671 HOH HOH . K 3 HOH C 18 673 673 HOH HOH . K 3 HOH C 19 674 674 HOH HOH . K 3 HOH C 20 682 682 HOH HOH . K 3 HOH C 21 686 686 HOH HOH . K 3 HOH C 22 688 688 HOH HOH . K 3 HOH C 23 689 689 HOH HOH . K 3 HOH C 24 691 691 HOH HOH . K 3 HOH C 25 696 696 HOH HOH . K 3 HOH C 26 698 698 HOH HOH . K 3 HOH C 27 700 700 HOH HOH . K 3 HOH C 28 704 704 HOH HOH . K 3 HOH C 29 706 706 HOH HOH . K 3 HOH C 30 708 708 HOH HOH . K 3 HOH C 31 712 712 HOH HOH . K 3 HOH C 32 719 719 HOH HOH . K 3 HOH C 33 722 722 HOH HOH . K 3 HOH C 34 725 725 HOH HOH . K 3 HOH C 35 727 727 HOH HOH . K 3 HOH C 36 728 728 HOH HOH . L 3 HOH D 1 608 608 HOH HOH . L 3 HOH D 2 649 649 HOH HOH . L 3 HOH D 3 650 650 HOH HOH . L 3 HOH D 4 651 651 HOH HOH . L 3 HOH D 5 652 652 HOH HOH . L 3 HOH D 6 653 653 HOH HOH . L 3 HOH D 7 654 654 HOH HOH . L 3 HOH D 8 661 661 HOH HOH . L 3 HOH D 9 676 676 HOH HOH . L 3 HOH D 10 677 677 HOH HOH . L 3 HOH D 11 684 684 HOH HOH . L 3 HOH D 12 693 693 HOH HOH . L 3 HOH D 13 697 697 HOH HOH . L 3 HOH D 14 699 699 HOH HOH . L 3 HOH D 15 702 702 HOH HOH . L 3 HOH D 16 707 707 HOH HOH . L 3 HOH D 17 715 715 HOH HOH . L 3 HOH D 18 718 718 HOH HOH . L 3 HOH D 19 723 723 HOH HOH . L 3 HOH D 20 726 726 HOH HOH . L 3 HOH D 21 729 729 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . H 2 50.676 75.08 97.132 1 76.05 ? PA NAD 503 D 1 HETATM 2 O O1A NAD . . . H 2 50.553 74.011 96.1 1 76.05 ? O1A NAD 503 D 1 HETATM 3 O O2A NAD . . . H 2 49.473 75.856 97.511 1 76.05 ? O2A NAD 503 D 1 HETATM 4 O O5B NAD . . . H 2 51.332 74.441 98.461 1 76.05 ? O5B NAD 503 D 1 HETATM 5 C C5B NAD . . . H 2 51.217 75.072 99.75 1 76.05 ? C5B NAD 503 D 1 HETATM 6 C C4B NAD . . . H 2 51.615 74.168 100.932 1 76.05 ? C4B NAD 503 D 1 HETATM 7 O O4B NAD . . . H 2 51.579 74.906 102.171 1 76.05 ? O4B NAD 503 D 1 HETATM 8 C C3B NAD . . . H 2 50.69 72.973 101.134 1 76.05 ? C3B NAD 503 D 1 HETATM 9 O O3B NAD . . . H 2 51.374 71.852 101.723 1 76.05 ? O3B NAD 503 D 1 HETATM 10 C C2B NAD . . . H 2 49.622 73.548 102.057 1 76.05 ? C2B NAD 503 D 1 HETATM 11 O O2B NAD . . . H 2 48.949 72.532 102.81 1 76.05 ? O2B NAD 503 D 1 HETATM 12 C C1B NAD . . . H 2 50.44 74.481 102.952 1 76.05 ? C1B NAD 503 D 1 HETATM 13 N N9A NAD . . . H 2 49.708 75.668 103.488 1 76.05 ? N9A NAD 503 D 1 HETATM 14 C C8A NAD . . . H 2 49.925 76.181 104.751 1 76.05 ? C8A NAD 503 D 1 HETATM 15 N N7A NAD . . . H 2 49.042 77.152 104.975 1 76.05 ? N7A NAD 503 D 1 HETATM 16 C C5A NAD . . . H 2 48.332 77.273 103.883 1 76.05 ? C5A NAD 503 D 1 HETATM 17 C C6A NAD . . . H 2 47.248 78.149 103.768 1 76.05 ? C6A NAD 503 D 1 HETATM 18 N N6A NAD . . . H 2 47.017 79.124 104.651 1 76.05 ? N6A NAD 503 D 1 HETATM 19 N N1A NAD . . . H 2 46.524 78.09 102.598 1 76.05 ? N1A NAD 503 D 1 HETATM 20 C C2A NAD . . . H 2 47.026 77.348 101.546 1 76.05 ? C2A NAD 503 D 1 HETATM 21 N N3A NAD . . . H 2 48.163 76.583 101.632 1 76.05 ? N3A NAD 503 D 1 HETATM 22 C C4A NAD . . . H 2 48.747 76.442 102.866 1 76.05 ? C4A NAD 503 D 1 HETATM 23 O O3 NAD . . . H 2 51.808 76.118 96.663 1 76.05 ? O3 NAD 503 D 1 HETATM 24 P PN NAD . . . H 2 53.155 75.944 95.83 1 76.05 ? PN NAD 503 D 1 HETATM 25 O O1N NAD . . . H 2 53.802 74.673 96.23 1 76.05 ? O1N NAD 503 D 1 HETATM 26 O O2N NAD . . . H 2 52.837 76.161 94.406 1 76.05 ? O2N NAD 503 D 1 HETATM 27 O O5D NAD . . . H 2 54.038 77.179 96.357 1 76.05 ? O5D NAD 503 D 1 HETATM 28 C C5D NAD . . . H 2 54.663 77.185 97.657 1 76.05 ? C5D NAD 503 D 1 HETATM 29 C C4D NAD . . . H 2 55.888 78.12 97.78 1 76.05 ? C4D NAD 503 D 1 HETATM 30 O O4D NAD . . . H 2 56.925 77.734 96.855 1 76.05 ? O4D NAD 503 D 1 HETATM 31 C C3D NAD . . . H 2 55.575 79.591 97.489 1 76.05 ? C3D NAD 503 D 1 HETATM 32 O O3D NAD . . . H 2 56.357 80.481 98.289 1 76.05 ? O3D NAD 503 D 1 HETATM 33 C C2D NAD . . . H 2 55.912 79.717 96.012 1 76.05 ? C2D NAD 503 D 1 HETATM 34 O O2D NAD . . . H 2 56.224 81.063 95.626 1 76.05 ? O2D NAD 503 D 1 HETATM 35 C C1D NAD . . . H 2 57.11 78.78 95.878 1 76.05 ? C1D NAD 503 D 1 HETATM 36 N N1N NAD . . . H 2 57.262 78.211 94.503 1 76.05 ? N1N NAD 503 D 1 HETATM 37 C C2N NAD . . . H 2 58.519 78.318 93.848 1 76.05 ? C2N NAD 503 D 1 HETATM 38 C C3N NAD . . . H 2 58.72 77.713 92.593 1 76.05 ? C3N NAD 503 D 1 HETATM 39 C C7N NAD . . . H 2 60.12 77.615 91.955 1 76.05 ? C7N NAD 503 D 1 HETATM 40 O O7N NAD . . . H 2 60.251 77.074 90.862 1 76.05 ? O7N NAD 503 D 1 HETATM 41 N N7N NAD . . . H 2 61.157 78.124 92.634 1 76.05 ? N7N NAD 503 D 1 HETATM 42 C C4N NAD . . . H 2 57.591 77.18 91.92 1 76.05 ? C4N NAD 503 D 1 HETATM 43 C C5N NAD . . . H 2 56.348 76.999 92.564 1 76.05 ? C5N NAD 503 D 1 HETATM 44 C C6N NAD . . . H 2 56.193 77.48 93.878 1 76.05 ? C6N NAD 503 D 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #