data_1EXQ # _model_server_result.job_id GPbTRsB-7W2rdIUDoXnPdg _model_server_result.datetime_utc '2024-11-05 08:11:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1exq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 1EXQ # _exptl.entry_id 1EXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1EXQ _cell.length_a 48.886 _cell.length_b 48.886 _cell.length_c 103.644 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 10 A CYS 65 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc2 A SG CYS 10 A CYS 65 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc3 A NE2 HIS 12 A HIS 67 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc4 A OE2 GLU 37 A GLU 92 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc5 A OE1 GLU 37 A GLU 92 1_555 C CD CD . A CD 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc6 A OE2 GLU 37 A GLU 92 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc7 A OD2 ASP 61 A ASP 116 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc8 A OD1 ASP 76 A ASP 131 2_654 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc9 A OD2 ASP 76 A ASP 131 2_654 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc10 E CL CL . A CL 501 1_555 D CD CD . A CD 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? metalc ? metalc11 C CD CD . A CD 1001 1_555 B OD1 ASP 76 B ASP 131 3_765 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc12 C CD CD . A CD 1001 1_555 B OD2 ASP 76 B ASP 131 3_765 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc13 D CD CD . A CD 1002 1_555 M O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc14 D CD CD . A CD 1002 1_555 N O HOH . B HOH 1005 3_765 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc15 B SG CYS 10 B CYS 65 1_555 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc16 B SG CYS 10 B CYS 65 1_555 H CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc17 B NE2 HIS 12 B HIS 67 1_555 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc18 B OE1 GLU 37 B GLU 92 1_555 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc19 B OE2 GLU 37 B GLU 92 1_555 G CD CD . B CD 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? metalc ? metalc20 B OE2 GLU 37 B GLU 92 1_555 H CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc21 B OD2 ASP 61 B ASP 116 1_555 H CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc22 I CL CL . B CL 502 1_555 H CD CD . B CD 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc23 H CD CD . B CD 1004 1_555 N O HOH . B HOH 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc24 H CD CD . B CD 1004 1_555 N O HOH . B HOH 1012 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.684 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1EXQ _atom_sites.fract_transf_matrix[1][1] 0.020456 _atom_sites.fract_transf_matrix[1][2] 0.01181 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 1001 1001 CD CD . D 2 CD A 1 1002 1002 CD CD . E 3 CL A 1 501 501 CL CL . F 4 SO4 A 1 750 750 SO4 SO4 . G 2 CD B 1 1003 1003 CD CD . H 2 CD B 1 1004 1004 CD CD . I 3 CL B 1 502 502 CL CL . J 4 SO4 B 1 751 751 SO4 SO4 . K 4 SO4 B 1 752 752 SO4 SO4 . L 4 SO4 B 1 753 753 SO4 SO4 . M 5 HOH A 1 1003 1 HOH HOH . M 5 HOH A 2 1004 2 HOH HOH . M 5 HOH A 3 1005 3 HOH HOH . M 5 HOH A 4 1006 4 HOH HOH . M 5 HOH A 5 1007 5 HOH HOH . M 5 HOH A 6 1008 8 HOH HOH . M 5 HOH A 7 1009 9 HOH HOH . M 5 HOH A 8 1010 11 HOH HOH . M 5 HOH A 9 1011 12 HOH HOH . M 5 HOH A 10 1012 13 HOH HOH . M 5 HOH A 11 1013 15 HOH HOH . M 5 HOH A 12 1014 16 HOH HOH . M 5 HOH A 13 1015 17 HOH HOH . M 5 HOH A 14 1016 18 HOH HOH . M 5 HOH A 15 1017 19 HOH HOH . M 5 HOH A 16 1018 20 HOH HOH . M 5 HOH A 17 1019 21 HOH HOH . M 5 HOH A 18 1020 22 HOH HOH . M 5 HOH A 19 1021 23 HOH HOH . M 5 HOH A 20 1022 24 HOH HOH . M 5 HOH A 21 1023 25 HOH HOH . M 5 HOH A 22 1024 26 HOH HOH . M 5 HOH A 23 1025 27 HOH HOH . M 5 HOH A 24 1026 29 HOH HOH . M 5 HOH A 25 1027 37 HOH HOH . M 5 HOH A 26 1028 39 HOH HOH . M 5 HOH A 27 1029 47 HOH HOH . M 5 HOH A 28 1030 48 HOH HOH . M 5 HOH A 29 1031 49 HOH HOH . M 5 HOH A 30 1032 50 HOH HOH . M 5 HOH A 31 1033 51 HOH HOH . M 5 HOH A 32 1034 53 HOH HOH . M 5 HOH A 33 1035 54 HOH HOH . M 5 HOH A 34 1036 55 HOH HOH . M 5 HOH A 35 1037 56 HOH HOH . M 5 HOH A 36 1038 57 HOH HOH . M 5 HOH A 37 1039 58 HOH HOH . M 5 HOH A 38 1040 67 HOH HOH . M 5 HOH A 39 1041 68 HOH HOH . M 5 HOH A 40 1042 69 HOH HOH . M 5 HOH A 41 1043 70 HOH HOH . M 5 HOH A 42 1044 71 HOH HOH . M 5 HOH A 43 1045 72 HOH HOH . M 5 HOH A 44 1046 73 HOH HOH . M 5 HOH A 45 1047 74 HOH HOH . M 5 HOH A 46 1048 75 HOH HOH . M 5 HOH A 47 1049 82 HOH HOH . M 5 HOH A 48 1050 84 HOH HOH . M 5 HOH A 49 1051 85 HOH HOH . M 5 HOH A 50 1052 86 HOH HOH . M 5 HOH A 51 1053 87 HOH HOH . M 5 HOH A 52 1054 88 HOH HOH . M 5 HOH A 53 1055 89 HOH HOH . M 5 HOH A 54 1056 90 HOH HOH . M 5 HOH A 55 1057 91 HOH HOH . M 5 HOH A 56 1058 100 HOH HOH . M 5 HOH A 57 1059 101 HOH HOH . N 5 HOH B 1 1005 6 HOH HOH . N 5 HOH B 2 1006 10 HOH HOH . N 5 HOH B 3 1007 14 HOH HOH . N 5 HOH B 4 1008 28 HOH HOH . N 5 HOH B 5 1009 30 HOH HOH . N 5 HOH B 6 1010 31 HOH HOH . N 5 HOH B 7 1011 32 HOH HOH . N 5 HOH B 8 1012 34 HOH HOH . N 5 HOH B 9 1013 35 HOH HOH . N 5 HOH B 10 1014 36 HOH HOH . N 5 HOH B 11 1015 38 HOH HOH . N 5 HOH B 12 1016 40 HOH HOH . N 5 HOH B 13 1017 41 HOH HOH . N 5 HOH B 14 1018 42 HOH HOH . N 5 HOH B 15 1019 43 HOH HOH . N 5 HOH B 16 1020 44 HOH HOH . N 5 HOH B 17 1021 45 HOH HOH . N 5 HOH B 18 1022 46 HOH HOH . N 5 HOH B 19 1023 52 HOH HOH . N 5 HOH B 20 1024 59 HOH HOH . N 5 HOH B 21 1025 60 HOH HOH . N 5 HOH B 22 1026 61 HOH HOH . N 5 HOH B 23 1027 62 HOH HOH . N 5 HOH B 24 1028 63 HOH HOH . N 5 HOH B 25 1029 64 HOH HOH . N 5 HOH B 26 1030 65 HOH HOH . N 5 HOH B 27 1031 66 HOH HOH . N 5 HOH B 28 1032 76 HOH HOH . N 5 HOH B 29 1033 77 HOH HOH . N 5 HOH B 30 1034 78 HOH HOH . N 5 HOH B 31 1035 79 HOH HOH . N 5 HOH B 32 1036 80 HOH HOH . N 5 HOH B 33 1037 81 HOH HOH . N 5 HOH B 34 1038 83 HOH HOH . N 5 HOH B 35 1039 92 HOH HOH . N 5 HOH B 36 1040 93 HOH HOH . N 5 HOH B 37 1041 94 HOH HOH . N 5 HOH B 38 1042 95 HOH HOH . N 5 HOH B 39 1043 96 HOH HOH . N 5 HOH B 40 1044 97 HOH HOH . N 5 HOH B 41 1045 98 HOH HOH . N 5 HOH B 42 1046 99 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 51.86 _atom_site.Cartn_y 6.426 _atom_site.Cartn_z 10.94 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #