data_1EXU # _model_server_result.job_id vYf6EKPiiRFfPOJ9LTPtmg _model_server_result.datetime_utc '2024-11-15 05:56:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1exu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1EXU # _exptl.entry_id 1EXU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1EXU _cell.length_a 66.387 _cell.length_b 66.387 _cell.length_c 221.813 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1EXU _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 96 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 198 A CYS 198 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 A SG CYS 48 A CYS 48 1_555 C S2 BME . A BME 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1EXU _atom_sites.fract_transf_matrix[1][1] 0.015063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 BME A 1 500 500 BME BME . D 4 HOH A 1 402 402 HOH WAT . D 4 HOH A 2 404 404 HOH WAT . D 4 HOH A 3 405 405 HOH WAT . D 4 HOH A 4 406 406 HOH WAT . D 4 HOH A 5 407 407 HOH WAT . D 4 HOH A 6 408 408 HOH WAT . D 4 HOH A 7 410 410 HOH WAT . D 4 HOH A 8 411 411 HOH WAT . D 4 HOH A 9 412 412 HOH WAT . D 4 HOH A 10 415 415 HOH WAT . D 4 HOH A 11 418 418 HOH WAT . D 4 HOH A 12 419 419 HOH WAT . D 4 HOH A 13 420 420 HOH WAT . D 4 HOH A 14 423 423 HOH WAT . D 4 HOH A 15 424 424 HOH WAT . D 4 HOH A 16 425 425 HOH WAT . D 4 HOH A 17 427 427 HOH WAT . D 4 HOH A 18 428 428 HOH WAT . D 4 HOH A 19 429 429 HOH WAT . D 4 HOH A 20 430 430 HOH WAT . D 4 HOH A 21 432 432 HOH WAT . D 4 HOH A 22 434 434 HOH WAT . D 4 HOH A 23 438 438 HOH WAT . D 4 HOH A 24 440 440 HOH WAT . D 4 HOH A 25 442 442 HOH WAT . D 4 HOH A 26 443 443 HOH WAT . D 4 HOH A 27 446 446 HOH WAT . D 4 HOH A 28 447 447 HOH WAT . E 4 HOH B 1 401 401 HOH WAT . E 4 HOH B 2 403 403 HOH WAT . E 4 HOH B 3 409 409 HOH WAT . E 4 HOH B 4 413 413 HOH WAT . E 4 HOH B 5 414 414 HOH WAT . E 4 HOH B 6 416 416 HOH WAT . E 4 HOH B 7 417 417 HOH WAT . E 4 HOH B 8 421 421 HOH WAT . E 4 HOH B 9 422 422 HOH WAT . E 4 HOH B 10 426 426 HOH WAT . E 4 HOH B 11 431 431 HOH WAT . E 4 HOH B 12 433 433 HOH WAT . E 4 HOH B 13 435 435 HOH WAT . E 4 HOH B 14 436 436 HOH WAT . E 4 HOH B 15 437 437 HOH WAT . E 4 HOH B 16 439 439 HOH WAT . E 4 HOH B 17 441 441 HOH WAT . E 4 HOH B 18 444 444 HOH WAT . E 4 HOH B 19 445 445 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . C 3 60.696 17.47 79.074 1 81.93 ? C1 BME 500 A 1 HETATM 2 C C2 BME . . . C 3 61.879 16.886 78.305 1 79.36 ? C2 BME 500 A 1 HETATM 3 O O1 BME . . . C 3 60.73 18.892 79.068 1 84.78 ? O1 BME 500 A 1 HETATM 4 S S2 BME . . . C 3 62.59 15.413 79.105 1 73.76 ? S2 BME 500 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 4 #