data_1F2A # _model_server_result.job_id Kyu1ISa5YCbzeg_mXB82BA _model_server_result.datetime_utc '2024-11-18 00:44:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f2a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1F2A # _exptl.entry_id 1F2A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 598.752 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[N-[BENZYLOXYCARBONYL]-PHENYLALANINYL-AMINO]-5-PHENYL-PENTANE-1-SULFONYLMETHYLBENZENE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.09 _cell.angle_gamma 90 _cell.entry_id 1F2A _cell.length_a 44.99 _cell.length_b 51.28 _cell.length_c 45.4 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F2A _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 101 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 155 A CYS 153 1_555 A SG CYS 203 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 B C27 VS2 . A VS2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? # _chem_comp.formula 'C35 H38 N2 O5 S' _chem_comp.formula_weight 598.752 _chem_comp.id VS2 _chem_comp.mon_nstd_flag . _chem_comp.name 3-[N-[BENZYLOXYCARBONYL]-PHENYLALANINYL-AMINO]-5-PHENYL-PENTANE-1-SULFONYLMETHYLBENZENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 VS2 doub 376 n y C1 C6 VS2 sing 377 n y C1 C7 VS2 sing 378 n n C2 C3 VS2 sing 379 n y C2 H21 VS2 sing 380 n n C3 C4 VS2 doub 381 n y C3 H31 VS2 sing 382 n n C4 C5 VS2 sing 383 n y C4 H41 VS2 sing 384 n n C5 C6 VS2 doub 385 n y C5 H51 VS2 sing 386 n n C6 H61 VS2 sing 387 n n C7 O1 VS2 sing 388 n n C7 H71 VS2 sing 389 n n C7 H72 VS2 sing 390 n n O1 C8 VS2 sing 391 n n C8 O2 VS2 doub 392 n n C8 N1 VS2 sing 393 n n N1 C9 VS2 sing 394 n n N1 HN11 VS2 sing 395 n n C9 C10 VS2 sing 396 n n C9 C17 VS2 sing 397 n n C9 H91 VS2 sing 398 n n C10 C11 VS2 sing 399 n n C10 H101 VS2 sing 400 n n C10 H102 VS2 sing 401 n n C11 C12 VS2 doub 402 n y C11 C16 VS2 sing 403 n y C12 C13 VS2 sing 404 n y C12 H121 VS2 sing 405 n n C13 C14 VS2 doub 406 n y C13 H131 VS2 sing 407 n n C14 C15 VS2 sing 408 n y C14 H141 VS2 sing 409 n n C15 C16 VS2 doub 410 n y C15 H151 VS2 sing 411 n n C16 H161 VS2 sing 412 n n C17 O3 VS2 doub 413 n n C17 N2 VS2 sing 414 n n N2 C18 VS2 sing 415 n n N2 HN21 VS2 sing 416 n n C18 C19 VS2 sing 417 n n C18 C27 VS2 sing 418 n n C18 H181 VS2 sing 419 n n C19 C20 VS2 sing 420 n n C19 H191 VS2 sing 421 n n C19 H192 VS2 sing 422 n n C20 C21 VS2 sing 423 n n C20 H201 VS2 sing 424 n n C20 H202 VS2 sing 425 n n C21 C22 VS2 doub 426 n y C21 C26 VS2 sing 427 n y C22 C23 VS2 sing 428 n y C22 H221 VS2 sing 429 n n C23 C24 VS2 doub 430 n y C23 H231 VS2 sing 431 n n C24 C25 VS2 sing 432 n y C24 H241 VS2 sing 433 n n C25 C26 VS2 doub 434 n y C25 H251 VS2 sing 435 n n C26 H261 VS2 sing 436 n n C28 S1 VS2 sing 437 n n C28 C27 VS2 sing 438 n n C28 H281 VS2 sing 439 n n C28 H282 VS2 sing 440 n n S1 O4 VS2 doub 441 n n S1 O5 VS2 doub 442 n n S1 C29 VS2 sing 443 n n C29 C30 VS2 sing 444 n n C29 H291 VS2 sing 445 n n C29 H292 VS2 sing 446 n n C30 C31 VS2 doub 447 n y C30 C35 VS2 sing 448 n y C31 C32 VS2 sing 449 n y C31 H311 VS2 sing 450 n n C32 C33 VS2 doub 451 n y C32 H321 VS2 sing 452 n n C33 C34 VS2 sing 453 n y C33 H331 VS2 sing 454 n n C34 C35 VS2 doub 455 n y C34 H341 VS2 sing 456 n n C35 H351 VS2 sing 457 n n C27 H271 VS2 sing 458 n n C27 H272 VS2 sing 459 n n # _atom_sites.entry_id 1F2A _atom_sites.fract_transf_matrix[1][1] 0.022227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010884 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019501 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VS2 A 1 300 300 VS2 VS2 . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 30 HOH HOH . C 3 HOH A 31 331 31 HOH HOH . C 3 HOH A 32 332 32 HOH HOH . C 3 HOH A 33 333 33 HOH HOH . C 3 HOH A 34 334 34 HOH HOH . C 3 HOH A 35 335 35 HOH HOH . C 3 HOH A 36 336 36 HOH HOH . C 3 HOH A 37 337 37 HOH HOH . C 3 HOH A 38 338 38 HOH HOH . C 3 HOH A 39 339 39 HOH HOH . C 3 HOH A 40 340 40 HOH HOH . C 3 HOH A 41 341 41 HOH HOH . C 3 HOH A 42 342 42 HOH HOH . C 3 HOH A 43 343 43 HOH HOH . C 3 HOH A 44 344 44 HOH HOH . C 3 HOH A 45 345 45 HOH HOH . C 3 HOH A 46 346 46 HOH HOH . C 3 HOH A 47 347 47 HOH HOH . C 3 HOH A 48 348 48 HOH HOH . C 3 HOH A 49 349 49 HOH HOH . C 3 HOH A 50 350 50 HOH HOH . C 3 HOH A 51 351 51 HOH HOH . C 3 HOH A 52 352 52 HOH HOH . C 3 HOH A 53 353 53 HOH HOH . C 3 HOH A 54 354 54 HOH HOH . C 3 HOH A 55 355 55 HOH HOH . C 3 HOH A 56 356 56 HOH HOH . C 3 HOH A 57 357 57 HOH HOH . C 3 HOH A 58 358 58 HOH HOH . C 3 HOH A 59 359 59 HOH HOH . C 3 HOH A 60 360 60 HOH HOH . C 3 HOH A 61 361 61 HOH HOH . C 3 HOH A 62 362 62 HOH HOH . C 3 HOH A 63 363 63 HOH HOH . C 3 HOH A 64 364 64 HOH HOH . C 3 HOH A 65 365 65 HOH HOH . C 3 HOH A 66 366 66 HOH HOH . C 3 HOH A 67 367 67 HOH HOH . C 3 HOH A 68 368 68 HOH HOH . C 3 HOH A 69 369 69 HOH HOH . C 3 HOH A 70 370 70 HOH HOH . C 3 HOH A 71 371 71 HOH HOH . C 3 HOH A 72 372 72 HOH HOH . C 3 HOH A 73 373 73 HOH HOH . C 3 HOH A 74 374 74 HOH HOH . C 3 HOH A 75 375 75 HOH HOH . C 3 HOH A 76 376 76 HOH HOH . C 3 HOH A 77 377 77 HOH HOH . C 3 HOH A 78 378 79 HOH HOH . C 3 HOH A 79 379 80 HOH HOH . C 3 HOH A 80 380 81 HOH HOH . C 3 HOH A 81 381 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 VS2 . . . B 2 1.142 -12.973 1.191 1 16.79 ? C1 VS2 300 A 1 HETATM 2 C C2 VS2 . . . B 2 0.947 -12.272 -0.019 1 17.66 ? C2 VS2 300 A 1 HETATM 3 C C3 VS2 . . . B 2 -0.355 -11.946 -0.454 1 19.56 ? C3 VS2 300 A 1 HETATM 4 C C4 VS2 . . . B 2 -1.467 -12.317 0.315 1 16.74 ? C4 VS2 300 A 1 HETATM 5 C C5 VS2 . . . B 2 -1.284 -13.021 1.513 1 16.16 ? C5 VS2 300 A 1 HETATM 6 C C6 VS2 . . . B 2 0.015 -13.351 1.954 1 17.12 ? C6 VS2 300 A 1 HETATM 7 C C7 VS2 . . . B 2 2.535 -13.113 1.761 1 17.02 ? C7 VS2 300 A 1 HETATM 8 O O1 VS2 . . . B 2 2.952 -11.906 2.402 1 15.41 ? O1 VS2 300 A 1 HETATM 9 C C8 VS2 . . . B 2 4.061 -11.906 3.16 1 16.65 ? C8 VS2 300 A 1 HETATM 10 O O2 VS2 . . . B 2 4.633 -12.937 3.516 1 18.14 ? O2 VS2 300 A 1 HETATM 11 N N1 VS2 . . . B 2 4.371 -10.669 3.642 1 13.63 ? N1 VS2 300 A 1 HETATM 12 C C9 VS2 . . . B 2 5.375 -10.456 4.698 1 13.25 ? C9 VS2 300 A 1 HETATM 13 C C10 VS2 . . . B 2 5.722 -8.968 4.839 1 12.82 ? C10 VS2 300 A 1 HETATM 14 C C11 VS2 . . . B 2 5.991 -8.34 3.5 1 13.51 ? C11 VS2 300 A 1 HETATM 15 C C12 VS2 . . . B 2 5.217 -7.227 3.141 1 12.54 ? C12 VS2 300 A 1 HETATM 16 C C13 VS2 . . . B 2 5.368 -6.643 1.876 1 13.97 ? C13 VS2 300 A 1 HETATM 17 C C14 VS2 . . . B 2 6.289 -7.162 0.955 1 13.19 ? C14 VS2 300 A 1 HETATM 18 C C15 VS2 . . . B 2 7.06 -8.278 1.304 1 14.4 ? C15 VS2 300 A 1 HETATM 19 C C16 VS2 . . . B 2 6.915 -8.867 2.576 1 13.67 ? C16 VS2 300 A 1 HETATM 20 C C17 VS2 . . . B 2 4.858 -10.962 5.998 1 14.76 ? C17 VS2 300 A 1 HETATM 21 O O3 VS2 . . . B 2 3.651 -10.954 6.265 1 14.79 ? O3 VS2 300 A 1 HETATM 22 N N2 VS2 . . . B 2 5.772 -11.359 6.916 1 12.54 ? N2 VS2 300 A 1 HETATM 23 C C18 VS2 . . . B 2 5.306 -11.784 8.237 1 14.47 ? C18 VS2 300 A 1 HETATM 24 C C19 VS2 . . . B 2 5.613 -13.308 8.406 1 15.52 ? C19 VS2 300 A 1 HETATM 25 C C20 VS2 . . . B 2 4.82 -14.18 7.427 1 19.51 ? C20 VS2 300 A 1 HETATM 26 C C21 VS2 . . . B 2 5.124 -15.64 7.626 1 24.05 ? C21 VS2 300 A 1 HETATM 27 C C22 VS2 . . . B 2 4.638 -16.337 8.745 1 27.42 ? C22 VS2 300 A 1 HETATM 28 C C23 VS2 . . . B 2 4.988 -17.685 8.953 1 28.7 ? C23 VS2 300 A 1 HETATM 29 C C24 VS2 . . . B 2 5.825 -18.337 8.03 1 27.97 ? C24 VS2 300 A 1 HETATM 30 C C25 VS2 . . . B 2 6.299 -17.654 6.899 1 27.13 ? C25 VS2 300 A 1 HETATM 31 C C26 VS2 . . . B 2 5.95 -16.308 6.701 1 26.37 ? C26 VS2 300 A 1 HETATM 32 C C28 VS2 . . . B 2 7.221 -11.357 9.63 1 17.28 ? C28 VS2 300 A 1 HETATM 33 S S1 VS2 . . . B 2 7.806 -11.748 11.214 1 16.11 ? S1 VS2 300 A 1 HETATM 34 O O4 VS2 . . . B 2 6.963 -12.822 11.716 1 17.73 ? O4 VS2 300 A 1 HETATM 35 O O5 VS2 . . . B 2 7.947 -10.599 12.082 1 15.13 ? O5 VS2 300 A 1 HETATM 36 C C29 VS2 . . . B 2 9.465 -12.437 10.886 1 22.66 ? C29 VS2 300 A 1 HETATM 37 C C30 VS2 . . . B 2 9.515 -13.709 10.02 1 27.5 ? C30 VS2 300 A 1 HETATM 38 C C31 VS2 . . . B 2 8.968 -14.903 10.522 1 30.37 ? C31 VS2 300 A 1 HETATM 39 C C32 VS2 . . . B 2 8.851 -16.048 9.711 1 32.87 ? C32 VS2 300 A 1 HETATM 40 C C33 VS2 . . . B 2 9.293 -16.021 8.378 1 32.5 ? C33 VS2 300 A 1 HETATM 41 C C34 VS2 . . . B 2 9.882 -14.857 7.868 1 30.5 ? C34 VS2 300 A 1 HETATM 42 C C35 VS2 . . . B 2 9.995 -13.71 8.689 1 29.42 ? C35 VS2 300 A 1 HETATM 43 C C27 VS2 . . . B 2 5.941 -11.013 9.392 1 13.71 ? C27 VS2 300 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 43 #