data_1F31 # _model_server_result.job_id ByZ6XPw8gKTmIUC9AnvX3A _model_server_result.datetime_utc '2024-11-27 09:52:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f31 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1292}' # _entry.id 1F31 # _exptl.entry_id 1F31 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.38 _cell.angle_gamma 90 _cell.entry_id 1F31 _cell.length_a 76.3 _cell.length_b 123.65 _cell.length_c 95.56 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F31 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GLA GLC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 SIA GLA C2 O2 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC ? 2002 GLC 2 n B GLA 2 B 2 GLA ? 2001 GLA 2 n B SIA 3 B 3 SIA ? 2000 SIA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 436 A CYS 436 1_555 A SG CYS 445 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 B O4 GLC . B GLC 1 1_555 B C1 GLA . B GLA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 ? covale ? covale2 B O3 GLA . B GLA 2 1_555 B C2 SIA . B SIA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? metalc ? metalc1 A NE2 HIS 229 A HIS 229 1_555 C ZN ZN . A ZN 1291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc2 A NE2 HIS 233 A HIS 233 1_555 C ZN ZN . A ZN 1291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 A OE1 GLU 267 A GLU 267 1_555 C ZN ZN . A ZN 1291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc4 A OE2 GLU 267 A GLU 267 1_555 C ZN ZN . A ZN 1291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc5 C ZN ZN . A ZN 1291 1_555 D O3 SO4 . A SO4 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc6 C ZN ZN . A ZN 1291 1_555 D S SO4 . A SO4 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc7 C ZN ZN . A ZN 1291 1_555 D O2 SO4 . A SO4 1292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 378 n n S O2 SO4 doub 379 n n S O3 SO4 sing 380 n n S O4 SO4 sing 381 n n # _atom_sites.entry_id 1F31 _atom_sites.fract_transf_matrix[1][1] 0.013106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1291 1291 ZN ZN . D 4 SO4 A 1 1292 1292 SO4 SO4 . E 5 HOH A 1 2003 2003 HOH TIP . E 5 HOH A 2 2004 2004 HOH TIP . E 5 HOH A 3 2005 2005 HOH TIP . E 5 HOH A 4 2006 2006 HOH TIP . E 5 HOH A 5 2007 2007 HOH TIP . E 5 HOH A 6 2008 2008 HOH TIP . E 5 HOH A 7 2009 2009 HOH TIP . E 5 HOH A 8 2010 2010 HOH TIP . E 5 HOH A 9 2011 2011 HOH TIP . E 5 HOH A 10 2012 2012 HOH TIP . E 5 HOH A 11 2013 2013 HOH TIP . E 5 HOH A 12 2014 2014 HOH TIP . E 5 HOH A 13 2015 2015 HOH TIP . E 5 HOH A 14 2016 2016 HOH TIP . E 5 HOH A 15 2017 2017 HOH TIP . E 5 HOH A 16 2018 2018 HOH TIP . E 5 HOH A 17 2019 2019 HOH TIP . E 5 HOH A 18 2020 2020 HOH TIP . E 5 HOH A 19 2021 2021 HOH TIP . E 5 HOH A 20 2022 2022 HOH TIP . E 5 HOH A 21 2023 2023 HOH TIP . E 5 HOH A 22 2024 2024 HOH TIP . E 5 HOH A 23 2025 2025 HOH TIP . E 5 HOH A 24 2026 2026 HOH TIP . E 5 HOH A 25 2027 2027 HOH TIP . E 5 HOH A 26 2028 2028 HOH TIP . E 5 HOH A 27 2029 2029 HOH TIP . E 5 HOH A 28 2030 2030 HOH TIP . E 5 HOH A 29 2031 2031 HOH TIP . E 5 HOH A 30 2032 2032 HOH TIP . E 5 HOH A 31 2033 2033 HOH TIP . E 5 HOH A 32 2034 2034 HOH TIP . E 5 HOH A 33 2035 2035 HOH TIP . E 5 HOH A 34 2036 2036 HOH TIP . E 5 HOH A 35 2037 2037 HOH TIP . E 5 HOH A 36 2038 2038 HOH TIP . E 5 HOH A 37 2039 2039 HOH TIP . E 5 HOH A 38 2040 2040 HOH TIP . E 5 HOH A 39 2041 2041 HOH TIP . E 5 HOH A 40 2042 2042 HOH TIP . E 5 HOH A 41 2043 2043 HOH TIP . E 5 HOH A 42 2044 2044 HOH TIP . E 5 HOH A 43 2045 2045 HOH TIP . E 5 HOH A 44 2046 2046 HOH TIP . E 5 HOH A 45 2047 2047 HOH TIP . E 5 HOH A 46 2048 2048 HOH TIP . E 5 HOH A 47 2049 2049 HOH TIP . E 5 HOH A 48 2050 2050 HOH TIP . E 5 HOH A 49 2051 2051 HOH TIP . E 5 HOH A 50 2052 2052 HOH TIP . E 5 HOH A 51 2053 2053 HOH TIP . E 5 HOH A 52 2054 2054 HOH TIP . E 5 HOH A 53 2055 2055 HOH TIP . E 5 HOH A 54 2056 2056 HOH TIP . E 5 HOH A 55 2057 2057 HOH TIP . E 5 HOH A 56 2058 2058 HOH TIP . E 5 HOH A 57 2059 2059 HOH TIP . E 5 HOH A 58 2060 2060 HOH TIP . E 5 HOH A 59 2061 2061 HOH TIP . E 5 HOH A 60 2062 2062 HOH TIP . E 5 HOH A 61 2063 2063 HOH TIP . E 5 HOH A 62 2064 2064 HOH TIP . E 5 HOH A 63 2065 2065 HOH TIP . E 5 HOH A 64 2066 2066 HOH TIP . E 5 HOH A 65 2067 2067 HOH TIP . E 5 HOH A 66 2068 2068 HOH TIP . E 5 HOH A 67 2069 2069 HOH TIP . E 5 HOH A 68 2070 2070 HOH TIP . E 5 HOH A 69 2071 2071 HOH TIP . E 5 HOH A 70 2072 2072 HOH TIP . E 5 HOH A 71 2073 2073 HOH TIP . E 5 HOH A 72 2074 2074 HOH TIP . E 5 HOH A 73 2075 2075 HOH TIP . E 5 HOH A 74 2076 2076 HOH TIP . E 5 HOH A 75 2077 2077 HOH TIP . E 5 HOH A 76 2078 2078 HOH TIP . E 5 HOH A 77 2079 2079 HOH TIP . E 5 HOH A 78 2080 2080 HOH TIP . E 5 HOH A 79 2081 2081 HOH TIP . E 5 HOH A 80 2082 2082 HOH TIP . E 5 HOH A 81 2083 2083 HOH TIP . E 5 HOH A 82 2084 2084 HOH TIP . E 5 HOH A 83 2085 2085 HOH TIP . E 5 HOH A 84 2086 2086 HOH TIP . E 5 HOH A 85 2087 2087 HOH TIP . E 5 HOH A 86 2088 2088 HOH TIP . E 5 HOH A 87 2089 2089 HOH TIP . E 5 HOH A 88 2090 2090 HOH TIP . E 5 HOH A 89 2091 2091 HOH TIP . E 5 HOH A 90 2092 2092 HOH TIP . E 5 HOH A 91 2093 2093 HOH TIP . E 5 HOH A 92 2094 2094 HOH TIP . E 5 HOH A 93 2095 2095 HOH TIP . E 5 HOH A 94 2096 2096 HOH TIP . E 5 HOH A 95 2097 2097 HOH TIP . E 5 HOH A 96 2098 2098 HOH TIP . E 5 HOH A 97 2099 2099 HOH TIP . E 5 HOH A 98 2100 2100 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 -3.067 93.169 79.422 1 24.18 ? S SO4 1292 A 1 HETATM 2 O O1 SO4 . . . D 4 -4.217 92.24 79.741 1 25.76 ? O1 SO4 1292 A 1 HETATM 3 O O2 SO4 . . . D 4 -2.398 92.674 78.182 1 24.84 ? O2 SO4 1292 A 1 HETATM 4 O O3 SO4 . . . D 4 -3.545 94.576 79.198 1 23.4 ? O3 SO4 1292 A 1 HETATM 5 O O4 SO4 . . . D 4 -2.156 93.119 80.603 1 25.96 ? O4 SO4 1292 A 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 5 #