data_1F34
#
_model_server_result.job_id            LNlq60LfPN87h102666Seg 
_model_server_result.datetime_utc      '2025-02-26 16:09:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1f34 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":327}' 
#
_entry.id    1F34 
#
_exptl.entry_id    1F34 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1F34 
_cell.length_a            65.374 
_cell.length_b            97.593 
_cell.length_c            136.394 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1F34 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 45 A CYS 45 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf2 A SG CYS 206 A CYS 206 1_555 A SG CYS 210 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 249 A CYS 249 1_555 A SG CYS 282 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 13 B CYS 13 1_555 B SG CYS 66 B CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 B SG CYS 48 B CYS 48 1_555 B SG CYS 59 B CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf6 B SG CYS 79 B CYS 79 1_555 B SG CYS 146 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
covale ? covale1 A C THR 67 A THR 67 1_555 A N SEP 68 A SEP 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale2 A C SEP 68 A SEP 68 1_555 A N GLN 69 A GLN 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 237 n n 
C1 H11 MPD sing 238 n n 
C1 H12 MPD sing 239 n n 
C1 H13 MPD sing 240 n n 
C2 O2 MPD sing 241 n n 
C2 CM MPD sing 242 n n 
C2 C3 MPD sing 243 n n 
O2 HO2 MPD sing 244 n n 
CM HM1 MPD sing 245 n n 
CM HM2 MPD sing 246 n n 
CM HM3 MPD sing 247 n n 
C3 C4 MPD sing 248 n n 
C3 H31 MPD sing 249 n n 
C3 H32 MPD sing 250 n n 
C4 O4 MPD sing 251 n n 
C4 C5 MPD sing 252 n n 
C4 H4 MPD sing 253 n n 
O4 HO4 MPD sing 254 n n 
C5 H51 MPD sing 255 n n 
C5 H52 MPD sing 256 n n 
C5 H53 MPD sing 257 n n 
#
_atom_sites.entry_id                     1F34 
_atom_sites.fract_transf_matrix[1][1]    0.015297 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010247 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007332 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MPD A 1 327 1 MPD MPD . 
D 4 HOH A 1 328 1 HOH HOH . 
D 4 HOH A 2 329 2 HOH HOH . 
D 4 HOH A 3 330 3 HOH HOH . 
D 4 HOH A 4 331 4 HOH HOH . 
D 4 HOH A 5 332 5 HOH HOH . 
D 4 HOH A 6 333 7 HOH HOH . 
D 4 HOH A 7 334 8 HOH HOH . 
D 4 HOH A 8 335 9 HOH HOH . 
D 4 HOH A 9 336 10 HOH HOH . 
D 4 HOH A 10 337 11 HOH HOH . 
D 4 HOH A 11 338 12 HOH HOH . 
D 4 HOH A 12 339 13 HOH HOH . 
D 4 HOH A 13 340 14 HOH HOH . 
D 4 HOH A 14 341 15 HOH HOH . 
D 4 HOH A 15 342 16 HOH HOH . 
D 4 HOH A 16 343 17 HOH HOH . 
D 4 HOH A 17 344 18 HOH HOH . 
D 4 HOH A 18 345 19 HOH HOH . 
D 4 HOH A 19 346 20 HOH HOH . 
D 4 HOH A 20 347 21 HOH HOH . 
D 4 HOH A 21 348 36 HOH HOH . 
D 4 HOH A 22 349 37 HOH HOH . 
D 4 HOH A 23 350 38 HOH HOH . 
D 4 HOH A 24 351 39 HOH HOH . 
D 4 HOH A 25 352 40 HOH HOH . 
D 4 HOH A 26 353 41 HOH HOH . 
D 4 HOH A 27 354 42 HOH HOH . 
D 4 HOH A 28 355 43 HOH HOH . 
D 4 HOH A 29 356 44 HOH HOH . 
D 4 HOH A 30 357 45 HOH HOH . 
D 4 HOH A 31 358 46 HOH HOH . 
D 4 HOH A 32 359 47 HOH HOH . 
D 4 HOH A 33 360 49 HOH HOH . 
D 4 HOH A 34 361 51 HOH HOH . 
D 4 HOH A 35 362 52 HOH HOH . 
D 4 HOH A 36 363 53 HOH HOH . 
D 4 HOH A 37 364 54 HOH HOH . 
D 4 HOH A 38 365 55 HOH HOH . 
D 4 HOH A 39 366 56 HOH HOH . 
D 4 HOH A 40 367 57 HOH HOH . 
D 4 HOH A 41 368 58 HOH HOH . 
D 4 HOH A 42 369 59 HOH HOH . 
D 4 HOH A 43 370 60 HOH HOH . 
D 4 HOH A 44 371 61 HOH HOH . 
D 4 HOH A 45 372 62 HOH HOH . 
D 4 HOH A 46 373 63 HOH HOH . 
D 4 HOH A 47 374 64 HOH HOH . 
D 4 HOH A 48 375 65 HOH HOH . 
D 4 HOH A 49 376 66 HOH HOH . 
D 4 HOH A 50 377 72 HOH HOH . 
D 4 HOH A 51 378 73 HOH HOH . 
D 4 HOH A 52 379 74 HOH HOH . 
D 4 HOH A 53 380 75 HOH HOH . 
D 4 HOH A 54 381 76 HOH HOH . 
D 4 HOH A 55 382 79 HOH HOH . 
D 4 HOH A 56 383 80 HOH HOH . 
D 4 HOH A 57 384 81 HOH HOH . 
D 4 HOH A 58 385 82 HOH HOH . 
D 4 HOH A 59 386 83 HOH HOH . 
D 4 HOH A 60 387 85 HOH HOH . 
D 4 HOH A 61 388 86 HOH HOH . 
D 4 HOH A 62 389 87 HOH HOH . 
D 4 HOH A 63 390 92 HOH HOH . 
D 4 HOH A 64 391 93 HOH HOH . 
D 4 HOH A 65 392 94 HOH HOH . 
D 4 HOH A 66 393 95 HOH HOH . 
D 4 HOH A 67 394 96 HOH HOH . 
D 4 HOH A 68 395 97 HOH HOH . 
D 4 HOH A 69 396 98 HOH HOH . 
D 4 HOH A 70 397 99 HOH HOH . 
D 4 HOH A 71 398 100 HOH HOH . 
D 4 HOH A 72 399 101 HOH HOH . 
D 4 HOH A 73 400 102 HOH HOH . 
E 4 HOH B 1 150 6 HOH HOH . 
E 4 HOH B 2 151 22 HOH HOH . 
E 4 HOH B 3 152 23 HOH HOH . 
E 4 HOH B 4 153 24 HOH HOH . 
E 4 HOH B 5 154 25 HOH HOH . 
E 4 HOH B 6 155 26 HOH HOH . 
E 4 HOH B 7 156 27 HOH HOH . 
E 4 HOH B 8 157 28 HOH HOH . 
E 4 HOH B 9 158 29 HOH HOH . 
E 4 HOH B 10 159 30 HOH HOH . 
E 4 HOH B 11 160 31 HOH HOH . 
E 4 HOH B 12 161 32 HOH HOH . 
E 4 HOH B 13 162 33 HOH HOH . 
E 4 HOH B 14 163 34 HOH HOH . 
E 4 HOH B 15 164 35 HOH HOH . 
E 4 HOH B 16 165 48 HOH HOH . 
E 4 HOH B 17 166 50 HOH HOH . 
E 4 HOH B 18 167 67 HOH HOH . 
E 4 HOH B 19 168 68 HOH HOH . 
E 4 HOH B 20 169 69 HOH HOH . 
E 4 HOH B 21 170 70 HOH HOH . 
E 4 HOH B 22 171 71 HOH HOH . 
E 4 HOH B 23 172 77 HOH HOH . 
E 4 HOH B 24 173 78 HOH HOH . 
E 4 HOH B 25 174 84 HOH HOH . 
E 4 HOH B 26 175 88 HOH HOH . 
E 4 HOH B 27 176 89 HOH HOH . 
E 4 HOH B 28 177 90 HOH HOH . 
E 4 HOH B 29 178 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . C 3 22.228 26.843 42.002 1 51.81 ? C1 MPD 327 A 1 
HETATM 2 C C2 MPD . . . C 3 23.442 27.038 42.93 1 51.5 ? C2 MPD 327 A 1 
HETATM 3 O O2 MPD . . . C 3 24.12 25.814 43.081 1 53.39 ? O2 MPD 327 A 1 
HETATM 4 C CM MPD . . . C 3 24.398 28.075 42.306 1 51.66 ? CM MPD 327 A 1 
HETATM 5 C C3 MPD . . . C 3 22.967 27.539 44.319 1 50.82 ? C3 MPD 327 A 1 
HETATM 6 C C4 MPD . . . C 3 21.522 27.079 44.583 1 48.64 ? C4 MPD 327 A 1 
HETATM 7 O O4 MPD . . . C 3 21.481 25.652 44.668 1 48.79 ? O4 MPD 327 A 1 
HETATM 8 C C5 MPD . . . C 3 20.985 27.66 45.888 1 45.94 ? C5 MPD 327 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#