data_1F4M
#
_model_server_result.job_id            Ej8wP4Ww7I_3jd5RmtRHdg 
_model_server_result.datetime_utc      '2024-11-17 03:43:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1f4m 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":104}' 
#
_entry.id    1F4M 
#
_exptl.entry_id    1F4M 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1F4M 
_cell.length_a            73.092 
_cell.length_b            73.092 
_cell.length_c            65.921 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1F4M 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,M,N 1 1 
C,D,I,J,O,P 2 1 
E,F,K,L,Q,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 39 A GLU 39 1_555 G CA CA . A CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc2 A OD1 ASP 43 A ASP 43 1_555 G CA CA . A CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc3 A OD2 ASP 43 A ASP 43 1_555 G CA CA . A CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc4 G CA CA . A CA 103 1_555 M O HOH . A HOH 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc5 G CA CA . A CA 103 1_555 M O HOH . A HOH 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc6 G CA CA . A CA 103 1_555 M O HOH . A HOH 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc7 G CA CA . A CA 103 1_555 M O HOH . A HOH 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc8 H CA CA . A CA 104 1_555 M O HOH . A HOH 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc9 H CA CA . A CA 104 1_555 M O HOH . A HOH 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
metalc ? metalc10 H CA CA . A CA 104 1_555 M O HOH . A HOH 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc11 H CA CA . A CA 104 1_555 B OE2 GLU 39 B GLU 39 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc12 H CA CA . A CA 104 1_555 B OD1 ASP 43 B ASP 43 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
metalc ? metalc13 H CA CA . A CA 104 1_555 B OD2 ASP 43 B ASP 43 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc14 C OE1 GLU 39 C GLU 39 1_555 I CA CA . C CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
metalc ? metalc15 C OD1 ASP 43 C ASP 43 1_555 I CA CA . C CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc16 C OD2 ASP 43 C ASP 43 1_555 I CA CA . C CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc17 I CA CA . C CA 101 1_555 O O HOH . C HOH 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc18 I CA CA . C CA 101 1_555 O O HOH . C HOH 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc19 I CA CA . C CA 101 1_555 O O HOH . C HOH 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc20 I CA CA . C CA 101 1_555 O O HOH . C HOH 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? 
metalc ? metalc21 J CA CA . C CA 102 1_555 O O HOH . C HOH 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc22 J CA CA . C CA 102 1_555 O O HOH . C HOH 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc23 J CA CA . C CA 102 1_555 O O HOH . C HOH 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc24 J CA CA . C CA 102 1_555 O O HOH . C HOH 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? 
metalc ? metalc25 J CA CA . C CA 102 1_555 D OE2 GLU 39 D GLU 39 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc26 J CA CA . C CA 102 1_555 D OD2 ASP 43 D ASP 43 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? 
metalc ? metalc27 J CA CA . C CA 102 1_555 D OD1 ASP 43 D ASP 43 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc28 E OE1 GLU 39 E GLU 39 1_555 K CA CA . E CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc29 E OD1 ASP 43 E ASP 43 1_555 K CA CA . E CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc30 E OD2 ASP 43 E ASP 43 1_555 K CA CA . E CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc31 K CA CA . E CA 105 1_555 Q O HOH . E HOH 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc32 K CA CA . E CA 105 1_555 Q O HOH . E HOH 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc33 L CA CA . E CA 106 1_555 Q O HOH . E HOH 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc34 L CA CA . E CA 106 1_555 F OE2 GLU 39 F GLU 39 2_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
metalc ? metalc35 L CA CA . E CA 106 1_555 F OD1 ASP 43 F ASP 43 2_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc36 L CA CA . E CA 106 1_555 F OD2 ASP 43 F ASP 43 2_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? 
metalc ? metalc37 L CA CA . E CA 106 1_555 R O HOH . F HOH 69 2_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1F4M 
_atom_sites.fract_transf_matrix[1][1]    0.013681 
_atom_sites.fract_transf_matrix[1][2]    0.007899 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015798 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01517 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 CA A 1 103 3 CA CA . 
H 2 CA A 1 104 4 CA CA . 
I 2 CA C 1 101 1 CA CA . 
J 2 CA C 1 102 2 CA CA . 
K 2 CA E 1 105 5 CA CA . 
L 2 CA E 1 106 6 CA CA . 
M 3 HOH A 1 105 8 HOH TIP . 
M 3 HOH A 2 106 9 HOH TIP . 
M 3 HOH A 3 107 13 HOH TIP . 
M 3 HOH A 4 108 14 HOH TIP . 
M 3 HOH A 5 109 16 HOH TIP . 
M 3 HOH A 6 110 26 HOH TIP . 
M 3 HOH A 7 111 27 HOH TIP . 
M 3 HOH A 8 112 28 HOH TIP . 
M 3 HOH A 9 113 29 HOH TIP . 
M 3 HOH A 10 114 38 HOH TIP . 
M 3 HOH A 11 115 42 HOH TIP . 
M 3 HOH A 12 116 45 HOH TIP . 
M 3 HOH A 13 117 53 HOH TIP . 
M 3 HOH A 14 118 60 HOH TIP . 
M 3 HOH A 15 119 61 HOH TIP . 
M 3 HOH A 16 120 63 HOH TIP . 
M 3 HOH A 17 121 65 HOH TIP . 
M 3 HOH A 18 122 68 HOH TIP . 
M 3 HOH A 19 123 69 HOH TIP . 
M 3 HOH A 20 124 70 HOH TIP . 
M 3 HOH A 21 125 71 HOH TIP . 
M 3 HOH A 22 126 75 HOH TIP . 
M 3 HOH A 23 127 81 HOH TIP . 
M 3 HOH A 24 128 83 HOH TIP . 
M 3 HOH A 25 129 88 HOH TIP . 
M 3 HOH A 26 130 89 HOH TIP . 
M 3 HOH A 27 131 92 HOH TIP . 
M 3 HOH A 28 132 93 HOH TIP . 
M 3 HOH A 29 133 100 HOH TIP . 
M 3 HOH A 30 134 110 HOH TIP . 
M 3 HOH A 31 135 113 HOH TIP . 
N 3 HOH B 1 64 10 HOH TIP . 
N 3 HOH B 2 65 18 HOH TIP . 
N 3 HOH B 3 66 20 HOH TIP . 
N 3 HOH B 4 67 21 HOH TIP . 
N 3 HOH B 5 68 22 HOH TIP . 
N 3 HOH B 6 69 23 HOH TIP . 
N 3 HOH B 7 70 52 HOH TIP . 
N 3 HOH B 8 71 56 HOH TIP . 
N 3 HOH B 9 72 66 HOH TIP . 
N 3 HOH B 10 73 73 HOH TIP . 
N 3 HOH B 11 74 74 HOH TIP . 
N 3 HOH B 12 75 79 HOH TIP . 
N 3 HOH B 13 76 85 HOH TIP . 
N 3 HOH B 14 77 86 HOH TIP . 
N 3 HOH B 15 78 96 HOH TIP . 
N 3 HOH B 16 79 105 HOH TIP . 
N 3 HOH B 17 80 107 HOH TIP . 
N 3 HOH B 18 81 108 HOH TIP . 
N 3 HOH B 19 82 111 HOH TIP . 
N 3 HOH B 20 83 112 HOH TIP . 
O 3 HOH C 1 103 11 HOH TIP . 
O 3 HOH C 2 104 12 HOH TIP . 
O 3 HOH C 3 105 15 HOH TIP . 
O 3 HOH C 4 106 30 HOH TIP . 
O 3 HOH C 5 107 31 HOH TIP . 
O 3 HOH C 6 108 32 HOH TIP . 
O 3 HOH C 7 109 33 HOH TIP . 
O 3 HOH C 8 110 40 HOH TIP . 
O 3 HOH C 9 111 43 HOH TIP . 
O 3 HOH C 10 112 44 HOH TIP . 
O 3 HOH C 11 113 46 HOH TIP . 
O 3 HOH C 12 114 48 HOH TIP . 
O 3 HOH C 13 115 50 HOH TIP . 
O 3 HOH C 14 116 51 HOH TIP . 
O 3 HOH C 15 117 54 HOH TIP . 
O 3 HOH C 16 118 55 HOH TIP . 
O 3 HOH C 17 119 57 HOH TIP . 
O 3 HOH C 18 120 62 HOH TIP . 
O 3 HOH C 19 121 64 HOH TIP . 
O 3 HOH C 20 122 67 HOH TIP . 
O 3 HOH C 21 123 76 HOH TIP . 
O 3 HOH C 22 124 78 HOH TIP . 
O 3 HOH C 23 125 82 HOH TIP . 
O 3 HOH C 24 126 94 HOH TIP . 
O 3 HOH C 25 127 97 HOH TIP . 
O 3 HOH C 26 128 99 HOH TIP . 
O 3 HOH C 27 129 101 HOH TIP . 
O 3 HOH C 28 130 102 HOH TIP . 
O 3 HOH C 29 131 106 HOH TIP . 
O 3 HOH C 30 132 109 HOH TIP . 
O 3 HOH C 31 133 114 HOH TIP . 
O 3 HOH C 32 134 115 HOH TIP . 
O 3 HOH C 33 135 117 HOH TIP . 
P 3 HOH D 1 64 7 HOH TIP . 
P 3 HOH D 2 65 19 HOH TIP . 
P 3 HOH D 3 66 37 HOH TIP . 
P 3 HOH D 4 67 47 HOH TIP . 
P 3 HOH D 5 68 49 HOH TIP . 
P 3 HOH D 6 69 59 HOH TIP . 
P 3 HOH D 7 70 72 HOH TIP . 
P 3 HOH D 8 71 77 HOH TIP . 
P 3 HOH D 9 72 84 HOH TIP . 
P 3 HOH D 10 73 91 HOH TIP . 
P 3 HOH D 11 74 98 HOH TIP . 
P 3 HOH D 12 75 116 HOH TIP . 
Q 3 HOH E 1 107 24 HOH TIP . 
Q 3 HOH E 2 108 34 HOH TIP . 
Q 3 HOH E 3 109 35 HOH TIP . 
Q 3 HOH E 4 110 36 HOH TIP . 
Q 3 HOH E 5 111 39 HOH TIP . 
Q 3 HOH E 6 112 41 HOH TIP . 
Q 3 HOH E 7 113 95 HOH TIP . 
R 3 HOH F 1 64 17 HOH TIP . 
R 3 HOH F 2 65 25 HOH TIP . 
R 3 HOH F 3 66 58 HOH TIP . 
R 3 HOH F 4 67 80 HOH TIP . 
R 3 HOH F 5 68 87 HOH TIP . 
R 3 HOH F 6 69 90 HOH TIP . 
R 3 HOH F 7 70 103 HOH TIP . 
R 3 HOH F 8 71 104 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               8.453 
_atom_site.Cartn_y               4.831 
_atom_site.Cartn_z               5.699 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        29.09 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           104 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#