data_1F5F # _model_server_result.job_id 3HOIWtA8j5hG8e8TOzbWwg _model_server_result.datetime_utc '2024-11-22 11:12:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f5f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":253}' # _entry.id 1F5F # _exptl.entry_id 1F5F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.44 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ALPHA-DIHYDROTESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1F5F _cell.length_a 104.02 _cell.length_b 104.02 _cell.length_c 84.71 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F5F _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 17_555 x-y+1/3,-y+2/3,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 60.055975 56.473333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 164 A CYS 164 1_555 A SG CYS 188 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OD1 ASP 50 A ASP 50 1_555 B CA CA . A CA 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OD2 ASP 50 A ASP 50 1_555 B CA CA . A CA 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc3 A O GLU 52 A GLU 52 1_555 B CA CA . A CA 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 A OD1 ASP 65 A ASP 65 1_555 C ZN ZN . A ZN 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc5 A OD2 ASP 65 A ASP 65 1_555 C ZN ZN . A ZN 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc6 A NE2 HIS 83 A HIS 83 1_555 C ZN ZN . A ZN 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc7 A ND1 HIS 101 A HIS 101 1_555 D ZN ZN . A ZN 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc8 A OD2 ASP 117 A ASP 117 1_555 D ZN ZN . A ZN 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.697 ? metalc ? metalc9 A NE2 HIS 136 A HIS 136 1_555 C ZN ZN . A ZN 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc10 A O ALA 160 A ALA 160 1_555 B CA CA . A CA 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc11 B CA CA . A CA 250 1_555 G O HOH . A HOH 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc12 B CA CA . A CA 250 1_555 G O HOH . A HOH 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc13 B CA CA . A CA 250 1_555 G O HOH . A HOH 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc14 D ZN ZN . A ZN 252 1_555 G O HOH . A HOH 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc15 D ZN ZN . A ZN 252 1_555 G O HOH . A HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? # _chem_comp.formula 'C19 H30 O2' _chem_comp.formula_weight 290.44 _chem_comp.id DHT _chem_comp.mon_nstd_flag . _chem_comp.name 5-ALPHA-DIHYDROTESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DHT sing 83 n n C1 C10 DHT sing 84 n n C1 H11 DHT sing 85 n n C1 H12 DHT sing 86 n n C2 C3 DHT sing 87 n n C2 H21 DHT sing 88 n n C2 H22 DHT sing 89 n n C3 O3 DHT doub 90 n n C3 C4 DHT sing 91 n n C4 C5 DHT sing 92 n n C4 H41 DHT sing 93 n n C4 H42 DHT sing 94 n n C5 C6 DHT sing 95 n n C5 C10 DHT sing 96 n n C5 H5 DHT sing 97 n n C6 C7 DHT sing 98 n n C6 H61 DHT sing 99 n n C6 H62 DHT sing 100 n n C7 C8 DHT sing 101 n n C7 H71 DHT sing 102 n n C7 H72 DHT sing 103 n n C8 C9 DHT sing 104 n n C8 C14 DHT sing 105 n n C8 H8 DHT sing 106 n n C9 C10 DHT sing 107 n n C9 C11 DHT sing 108 n n C9 H9 DHT sing 109 n n C10 C19 DHT sing 110 n n C11 C12 DHT sing 111 n n C11 H111 DHT sing 112 n n C11 H112 DHT sing 113 n n C12 C13 DHT sing 114 n n C12 H121 DHT sing 115 n n C12 H122 DHT sing 116 n n C13 C14 DHT sing 117 n n C13 C17 DHT sing 118 n n C13 C18 DHT sing 119 n n C14 C15 DHT sing 120 n n C14 H14 DHT sing 121 n n C15 C16 DHT sing 122 n n C15 H151 DHT sing 123 n n C15 H152 DHT sing 124 n n C16 C17 DHT sing 125 n n C16 H161 DHT sing 126 n n C16 H162 DHT sing 127 n n C17 O17 DHT sing 128 n n C17 H17 DHT sing 129 n n O17 HO7 DHT sing 130 n n C18 H181 DHT sing 131 n n C18 H182 DHT sing 132 n n C18 H183 DHT sing 133 n n C19 H191 DHT sing 134 n n C19 H192 DHT sing 135 n n C19 H193 DHT sing 136 n n # _atom_sites.entry_id 1F5F _atom_sites.fract_transf_matrix[1][1] 0.00961 _atom_sites.fract_transf_matrix[1][2] 0.00555 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0111 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 250 1 CA IUM . C 3 ZN A 1 251 1 ZN IUM . D 3 ZN A 1 252 2 ZN IUM . E 4 DHT A 1 253 1 DHT DHT . F 5 IPA A 1 254 1 IPA POP . G 6 HOH A 1 255 1 HOH WAT . G 6 HOH A 2 256 2 HOH WAT . G 6 HOH A 3 257 3 HOH WAT . G 6 HOH A 4 258 4 HOH WAT . G 6 HOH A 5 259 5 HOH WAT . G 6 HOH A 6 260 6 HOH WAT . G 6 HOH A 7 261 7 HOH WAT . G 6 HOH A 8 262 8 HOH WAT . G 6 HOH A 9 263 9 HOH WAT . G 6 HOH A 10 264 10 HOH WAT . G 6 HOH A 11 265 11 HOH WAT . G 6 HOH A 12 266 12 HOH WAT . G 6 HOH A 13 267 13 HOH WAT . G 6 HOH A 14 268 14 HOH WAT . G 6 HOH A 15 269 15 HOH WAT . G 6 HOH A 16 270 16 HOH WAT . G 6 HOH A 17 271 17 HOH WAT . G 6 HOH A 18 272 18 HOH WAT . G 6 HOH A 19 273 19 HOH WAT . G 6 HOH A 20 274 20 HOH WAT . G 6 HOH A 21 275 21 HOH WAT . G 6 HOH A 22 276 22 HOH WAT . G 6 HOH A 23 277 23 HOH WAT . G 6 HOH A 24 278 24 HOH WAT . G 6 HOH A 25 279 25 HOH WAT . G 6 HOH A 26 280 26 HOH WAT . G 6 HOH A 27 281 27 HOH WAT . G 6 HOH A 28 282 28 HOH WAT . G 6 HOH A 29 283 29 HOH WAT . G 6 HOH A 30 284 30 HOH WAT . G 6 HOH A 31 285 31 HOH WAT . G 6 HOH A 32 286 32 HOH WAT . G 6 HOH A 33 287 33 HOH WAT . G 6 HOH A 34 288 34 HOH WAT . G 6 HOH A 35 289 35 HOH WAT . G 6 HOH A 36 290 36 HOH WAT . G 6 HOH A 37 291 37 HOH WAT . G 6 HOH A 38 292 38 HOH WAT . G 6 HOH A 39 293 39 HOH WAT . G 6 HOH A 40 294 40 HOH WAT . G 6 HOH A 41 295 41 HOH WAT . G 6 HOH A 42 296 42 HOH WAT . G 6 HOH A 43 297 43 HOH WAT . G 6 HOH A 44 298 44 HOH WAT . G 6 HOH A 45 299 45 HOH WAT . G 6 HOH A 46 300 46 HOH WAT . G 6 HOH A 47 301 47 HOH WAT . G 6 HOH A 48 302 48 HOH WAT . G 6 HOH A 49 303 49 HOH WAT . G 6 HOH A 50 304 50 HOH WAT . G 6 HOH A 51 305 51 HOH WAT . G 6 HOH A 52 306 52 HOH WAT . G 6 HOH A 53 307 53 HOH WAT . G 6 HOH A 54 308 54 HOH WAT . G 6 HOH A 55 309 55 HOH WAT . G 6 HOH A 56 310 56 HOH WAT . G 6 HOH A 57 311 57 HOH WAT . G 6 HOH A 58 312 58 HOH WAT . G 6 HOH A 59 313 59 HOH WAT . G 6 HOH A 60 314 60 HOH WAT . G 6 HOH A 61 315 61 HOH WAT . G 6 HOH A 62 316 62 HOH WAT . G 6 HOH A 63 317 63 HOH WAT . G 6 HOH A 64 318 64 HOH WAT . G 6 HOH A 65 319 65 HOH WAT . G 6 HOH A 66 320 66 HOH WAT . G 6 HOH A 67 321 67 HOH WAT . G 6 HOH A 68 322 68 HOH WAT . G 6 HOH A 69 323 69 HOH WAT . G 6 HOH A 70 324 70 HOH WAT . G 6 HOH A 71 325 71 HOH WAT . G 6 HOH A 72 326 72 HOH WAT . G 6 HOH A 73 327 73 HOH WAT . G 6 HOH A 74 328 74 HOH WAT . G 6 HOH A 75 329 75 HOH WAT . G 6 HOH A 76 330 76 HOH WAT . G 6 HOH A 77 331 77 HOH WAT . G 6 HOH A 78 332 78 HOH WAT . G 6 HOH A 79 333 79 HOH WAT . G 6 HOH A 80 334 80 HOH WAT . G 6 HOH A 81 335 81 HOH WAT . G 6 HOH A 82 336 82 HOH WAT . G 6 HOH A 83 337 83 HOH WAT . G 6 HOH A 84 338 84 HOH WAT . G 6 HOH A 85 339 85 HOH WAT . G 6 HOH A 86 340 86 HOH WAT . G 6 HOH A 87 341 87 HOH WAT . G 6 HOH A 88 342 88 HOH WAT . G 6 HOH A 89 343 89 HOH WAT . G 6 HOH A 90 344 90 HOH WAT . G 6 HOH A 91 345 91 HOH WAT . G 6 HOH A 92 346 92 HOH WAT . G 6 HOH A 93 347 93 HOH WAT . G 6 HOH A 94 348 94 HOH WAT . G 6 HOH A 95 349 95 HOH WAT . G 6 HOH A 96 350 96 HOH WAT . G 6 HOH A 97 351 97 HOH WAT . G 6 HOH A 98 352 98 HOH WAT . G 6 HOH A 99 353 99 HOH WAT . G 6 HOH A 100 354 100 HOH WAT . G 6 HOH A 101 355 101 HOH WAT . G 6 HOH A 102 356 102 HOH WAT . G 6 HOH A 103 357 103 HOH WAT . G 6 HOH A 104 358 104 HOH WAT . G 6 HOH A 105 359 105 HOH WAT . G 6 HOH A 106 360 106 HOH WAT . G 6 HOH A 107 361 107 HOH WAT . G 6 HOH A 108 362 108 HOH WAT . G 6 HOH A 109 363 109 HOH WAT . G 6 HOH A 110 364 110 HOH WAT . G 6 HOH A 111 365 111 HOH WAT . G 6 HOH A 112 366 112 HOH WAT . G 6 HOH A 113 367 113 HOH WAT . G 6 HOH A 114 368 114 HOH WAT . G 6 HOH A 115 369 115 HOH WAT . G 6 HOH A 116 370 116 HOH WAT . G 6 HOH A 117 371 117 HOH WAT . G 6 HOH A 118 372 118 HOH WAT . G 6 HOH A 119 373 119 HOH WAT . G 6 HOH A 120 374 120 HOH WAT . G 6 HOH A 121 375 121 HOH WAT . G 6 HOH A 122 376 122 HOH WAT . G 6 HOH A 123 377 123 HOH WAT . G 6 HOH A 124 378 124 HOH WAT . G 6 HOH A 125 379 125 HOH WAT . G 6 HOH A 126 380 126 HOH WAT . G 6 HOH A 127 381 127 HOH WAT . G 6 HOH A 128 382 128 HOH WAT . G 6 HOH A 129 383 129 HOH WAT . G 6 HOH A 130 384 130 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHT . . . E 4 24.136 9.993 31.082 1 22.02 ? C1 DHT 253 A 1 HETATM 2 C C2 DHT . . . E 4 25.627 10.242 30.844 1 20.53 ? C2 DHT 253 A 1 HETATM 3 C C3 DHT . . . E 4 25.97 11.69 31.111 1 23.56 ? C3 DHT 253 A 1 HETATM 4 O O3 DHT . . . E 4 26.822 12.261 30.44 1 29.25 ? O3 DHT 253 A 1 HETATM 5 C C4 DHT . . . E 4 25.282 12.463 32.174 1 19.45 ? C4 DHT 253 A 1 HETATM 6 C C5 DHT . . . E 4 23.801 12.155 32.334 1 18.73 ? C5 DHT 253 A 1 HETATM 7 C C6 DHT . . . E 4 23.154 12.802 33.533 1 19.26 ? C6 DHT 253 A 1 HETATM 8 C C7 DHT . . . E 4 21.625 12.767 33.493 1 19.33 ? C7 DHT 253 A 1 HETATM 9 C C8 DHT . . . E 4 21.176 11.274 33.397 1 20.1 ? C8 DHT 253 A 1 HETATM 10 C C9 DHT . . . E 4 21.934 10.578 32.257 1 19.67 ? C9 DHT 253 A 1 HETATM 11 C C10 DHT . . . E 4 23.475 10.624 32.319 1 22.75 ? C10 DHT 253 A 1 HETATM 12 C C11 DHT . . . E 4 21.441 9.128 32.049 1 24.3 ? C11 DHT 253 A 1 HETATM 13 C C12 DHT . . . E 4 19.927 8.967 32.015 1 21.7 ? C12 DHT 253 A 1 HETATM 14 C C13 DHT . . . E 4 19.199 9.681 33.13 1 26.8 ? C13 DHT 253 A 1 HETATM 15 C C14 DHT . . . E 4 19.678 11.139 33.205 1 20.1 ? C14 DHT 253 A 1 HETATM 16 C C15 DHT . . . E 4 18.751 11.741 34.282 1 20.7 ? C15 DHT 253 A 1 HETATM 17 C C16 DHT . . . E 4 17.386 11.064 33.993 1 24.38 ? C16 DHT 253 A 1 HETATM 18 C C17 DHT . . . E 4 17.719 9.932 33.014 1 25.06 ? C17 DHT 253 A 1 HETATM 19 O O17 DHT . . . E 4 16.906 8.756 33.24 1 30.54 ? O17 DHT 253 A 1 HETATM 20 C C18 DHT . . . E 4 19.46 8.9 34.463 1 23.56 ? C18 DHT 253 A 1 HETATM 21 C C19 DHT . . . E 4 24.084 9.959 33.568 1 20.52 ? C19 DHT 253 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 438 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #