data_1F5L # _model_server_result.job_id Du8oQJqyOnTf8RrhBHIZqg _model_server_result.datetime_utc '2024-11-29 16:03:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f5l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 1F5L # _exptl.entry_id 1F5L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.627 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,5-DIAMINO-N-(AMINOIMINOMETHYL)-6-CHLOROPYRAZINECARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1F5L _cell.length_a 52.8 _cell.length_b 54.6 _cell.length_c 82.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F5L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 A CYS 42 1_555 A SG CYS 47 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 39 A CYS 50 1_555 A SG CYS 110 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 135 A CYS 136 1_555 A SG CYS 204 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 167 A CYS 168 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 194 A CYS 191 1_555 A SG CYS 222 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'C6 H8 Cl N7 O' _chem_comp.formula_weight 229.627 _chem_comp.id AMR _chem_comp.mon_nstd_flag . _chem_comp.name 3,5-DIAMINO-N-(AMINOIMINOMETHYL)-6-CHLOROPYRAZINECARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms AMILORIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 AMR doub 13 n y N1 C5 AMR sing 14 n y C1 C3 AMR sing 15 n n C1 C2 AMR sing 16 n y C3 N5 AMR sing 17 n n C3 O1 AMR doub 18 n n N5 C6 AMR sing 19 n n N5 HN5 AMR sing 20 n n C6 N7 AMR sing 21 n n C6 N6 AMR doub 22 n n N7 HN71 AMR sing 23 n n N7 HN72 AMR sing 24 n n N6 HN6 AMR sing 25 n n C2 N4 AMR sing 26 n n C2 N3 AMR doub 27 n y N4 HN41 AMR sing 28 n n N4 HN42 AMR sing 29 n n N3 C4 AMR sing 30 n y C4 N2 AMR sing 31 n n C4 C5 AMR doub 32 n y N2 HN21 AMR sing 33 n n N2 HN22 AMR sing 34 n n C5 CL1 AMR sing 35 n n # _atom_sites.entry_id 1F5L _atom_sites.fract_transf_matrix[1][1] 0.018939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 501 SO4 SO4 . C 2 SO4 A 1 502 502 SO4 SO4 . D 3 AMR A 1 301 301 AMR AMI . E 4 HOH A 1 503 1 HOH HOH . E 4 HOH A 2 504 2 HOH HOH . E 4 HOH A 3 505 3 HOH HOH . E 4 HOH A 4 506 4 HOH HOH . E 4 HOH A 5 507 5 HOH HOH . E 4 HOH A 6 508 6 HOH HOH . E 4 HOH A 7 509 7 HOH HOH . E 4 HOH A 8 510 8 HOH HOH . E 4 HOH A 9 511 9 HOH HOH . E 4 HOH A 10 512 10 HOH HOH . E 4 HOH A 11 513 11 HOH HOH . E 4 HOH A 12 514 12 HOH HOH . E 4 HOH A 13 515 13 HOH HOH . E 4 HOH A 14 516 14 HOH HOH . E 4 HOH A 15 517 15 HOH HOH . E 4 HOH A 16 518 16 HOH HOH . E 4 HOH A 17 519 17 HOH HOH . E 4 HOH A 18 520 18 HOH HOH . E 4 HOH A 19 521 19 HOH HOH . E 4 HOH A 20 522 20 HOH HOH . E 4 HOH A 21 523 21 HOH HOH . E 4 HOH A 22 524 22 HOH HOH . E 4 HOH A 23 525 23 HOH HOH . E 4 HOH A 24 526 24 HOH HOH . E 4 HOH A 25 527 25 HOH HOH . E 4 HOH A 26 528 26 HOH HOH . E 4 HOH A 27 529 27 HOH HOH . E 4 HOH A 28 530 28 HOH HOH . E 4 HOH A 29 531 29 HOH HOH . E 4 HOH A 30 532 30 HOH HOH . E 4 HOH A 31 533 31 HOH HOH . E 4 HOH A 32 534 32 HOH HOH . E 4 HOH A 33 535 33 HOH HOH . E 4 HOH A 34 536 34 HOH HOH . E 4 HOH A 35 537 35 HOH HOH . E 4 HOH A 36 538 36 HOH HOH . E 4 HOH A 37 539 37 HOH HOH . E 4 HOH A 38 540 38 HOH HOH . E 4 HOH A 39 541 39 HOH HOH . E 4 HOH A 40 542 40 HOH HOH . E 4 HOH A 41 543 41 HOH HOH . E 4 HOH A 42 544 43 HOH HOH . E 4 HOH A 43 545 44 HOH HOH . E 4 HOH A 44 546 45 HOH HOH . E 4 HOH A 45 547 46 HOH HOH . E 4 HOH A 46 548 47 HOH HOH . E 4 HOH A 47 549 48 HOH HOH . E 4 HOH A 48 550 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AMR . . . D 3 31.112 7.669 27.683 1 32.65 ? N1 AMR 301 A 1 HETATM 2 C C1 AMR . . . D 3 30.502 6.741 28.432 1 28.09 ? C1 AMR 301 A 1 HETATM 3 C C3 AMR . . . D 3 31.24 5.355 28.601 1 28.76 ? C3 AMR 301 A 1 HETATM 4 N N5 AMR . . . D 3 32.555 5.279 28.131 1 38.73 ? N5 AMR 301 A 1 HETATM 5 C C6 AMR . . . D 3 33.251 4.177 28.08 1 31.87 ? C6 AMR 301 A 1 HETATM 6 N N7 AMR . . . D 3 32.767 3.018 28.462 1 23.85 ? N7 AMR 301 A 1 HETATM 7 N N6 AMR . . . D 3 34.47 4.24 27.63 1 33.38 ? N6 AMR 301 A 1 HETATM 8 O O1 AMR . . . D 3 30.652 4.396 29.115 1 27.26 ? O1 AMR 301 A 1 HETATM 9 C C2 AMR . . . D 3 29.261 7.026 29.019 1 24.54 ? C2 AMR 301 A 1 HETATM 10 N N4 AMR . . . D 3 28.573 6.086 29.814 1 29.31 ? N4 AMR 301 A 1 HETATM 11 N N3 AMR . . . D 3 28.693 8.238 28.825 1 39.01 ? N3 AMR 301 A 1 HETATM 12 C C4 AMR . . . D 3 29.314 9.179 28.065 1 43.62 ? C4 AMR 301 A 1 HETATM 13 N N2 AMR . . . D 3 28.666 10.436 27.895 1 44.75 ? N2 AMR 301 A 1 HETATM 14 C C5 AMR . . . D 3 30.561 8.88 27.478 1 40.65 ? C5 AMR 301 A 1 HETATM 15 CL CL1 AMR . . . D 3 31.432 10.016 26.487 1 37.4 ? CL1 AMR 301 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #