data_1F6B # _model_server_result.job_id tE2vqNIPNFVUazLwnx1kvQ _model_server_result.datetime_utc '2024-11-26 04:01:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 1F6B # _exptl.entry_id 1F6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.49 _cell.angle_gamma 90 _cell.entry_id 1F6B _cell.length_a 53.368 _cell.length_b 61.689 _cell.length_c 71.142 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 34 A ASP 34 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc2 A OD2 ASP 75 A ASP 75 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc3 A OD1 ASP 75 A ASP 75 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc4 G O2B GDP . A GDP 501 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc5 C MG MG . A MG 601 1_555 L O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc6 C MG MG . A MG 601 1_555 L O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc7 C MG MG . A MG 601 1_555 L O HOH . A HOH 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc8 B OG1 THR 39 B THR 39 1_555 H MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc9 K O1B GDP . B GDP 502 1_555 H MG MG . B MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc10 H MG MG . B MG 602 1_555 M O HOH . B HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc11 H MG MG . B MG 602 1_555 M O HOH . B HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc12 H MG MG . B MG 602 1_555 M O HOH . B HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc13 H MG MG . B MG 602 1_555 M O HOH . B HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 1F6B _atom_sites.fract_transf_matrix[1][1] 0.018738 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005904 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014738 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 601 601 MG MG . D 3 SO4 A 1 402 402 SO4 SO4 . E 3 SO4 A 1 404 404 SO4 SO4 . F 3 SO4 A 1 405 405 SO4 SO4 . G 4 GDP A 1 501 501 GDP GDP . H 2 MG B 1 602 602 MG MG . I 3 SO4 B 1 401 401 SO4 SO4 . J 3 SO4 B 1 403 403 SO4 SO4 . K 4 GDP B 1 502 502 GDP GDP . L 5 HOH A 1 602 1 HOH HOH . L 5 HOH A 2 603 2 HOH HOH . L 5 HOH A 3 604 7 HOH HOH . L 5 HOH A 4 605 8 HOH HOH . L 5 HOH A 5 606 13 HOH HOH . L 5 HOH A 6 607 15 HOH HOH . L 5 HOH A 7 608 16 HOH HOH . L 5 HOH A 8 609 17 HOH HOH . L 5 HOH A 9 610 19 HOH HOH . L 5 HOH A 10 611 21 HOH HOH . L 5 HOH A 11 612 23 HOH HOH . L 5 HOH A 12 613 25 HOH HOH . L 5 HOH A 13 614 26 HOH HOH . L 5 HOH A 14 615 27 HOH HOH . L 5 HOH A 15 616 28 HOH HOH . L 5 HOH A 16 617 29 HOH HOH . L 5 HOH A 17 618 32 HOH HOH . L 5 HOH A 18 619 34 HOH HOH . L 5 HOH A 19 620 35 HOH HOH . L 5 HOH A 20 621 39 HOH HOH . L 5 HOH A 21 622 40 HOH HOH . L 5 HOH A 22 623 41 HOH HOH . L 5 HOH A 23 624 43 HOH HOH . L 5 HOH A 24 625 45 HOH HOH . L 5 HOH A 25 626 46 HOH HOH . L 5 HOH A 26 627 47 HOH HOH . L 5 HOH A 27 628 50 HOH HOH . L 5 HOH A 28 629 51 HOH HOH . L 5 HOH A 29 630 52 HOH HOH . L 5 HOH A 30 631 54 HOH HOH . L 5 HOH A 31 632 55 HOH HOH . L 5 HOH A 32 633 56 HOH HOH . L 5 HOH A 33 634 58 HOH HOH . L 5 HOH A 34 635 60 HOH HOH . L 5 HOH A 35 636 62 HOH HOH . L 5 HOH A 36 637 63 HOH HOH . L 5 HOH A 37 638 64 HOH HOH . L 5 HOH A 38 639 68 HOH HOH . L 5 HOH A 39 640 70 HOH HOH . L 5 HOH A 40 641 82 HOH HOH . L 5 HOH A 41 642 84 HOH HOH . L 5 HOH A 42 643 87 HOH HOH . L 5 HOH A 43 644 88 HOH HOH . L 5 HOH A 44 645 91 HOH HOH . L 5 HOH A 45 646 93 HOH HOH . L 5 HOH A 46 647 94 HOH HOH . L 5 HOH A 47 648 95 HOH HOH . L 5 HOH A 48 649 97 HOH HOH . L 5 HOH A 49 650 102 HOH HOH . L 5 HOH A 50 651 106 HOH HOH . L 5 HOH A 51 652 108 HOH HOH . L 5 HOH A 52 653 109 HOH HOH . L 5 HOH A 53 654 113 HOH HOH . L 5 HOH A 54 655 114 HOH HOH . L 5 HOH A 55 656 116 HOH HOH . L 5 HOH A 56 657 117 HOH HOH . L 5 HOH A 57 658 118 HOH HOH . L 5 HOH A 58 659 119 HOH HOH . L 5 HOH A 59 660 121 HOH HOH . L 5 HOH A 60 661 126 HOH HOH . L 5 HOH A 61 662 127 HOH HOH . L 5 HOH A 62 663 128 HOH HOH . L 5 HOH A 63 664 129 HOH HOH . L 5 HOH A 64 665 131 HOH HOH . L 5 HOH A 65 666 132 HOH HOH . L 5 HOH A 66 667 134 HOH HOH . L 5 HOH A 67 668 136 HOH HOH . L 5 HOH A 68 669 138 HOH HOH . L 5 HOH A 69 670 139 HOH HOH . L 5 HOH A 70 671 140 HOH HOH . L 5 HOH A 71 672 144 HOH HOH . L 5 HOH A 72 673 145 HOH HOH . L 5 HOH A 73 674 147 HOH HOH . L 5 HOH A 74 675 148 HOH HOH . L 5 HOH A 75 676 149 HOH HOH . L 5 HOH A 76 677 150 HOH HOH . L 5 HOH A 77 678 152 HOH HOH . L 5 HOH A 78 679 154 HOH HOH . L 5 HOH A 79 680 157 HOH HOH . L 5 HOH A 80 681 162 HOH HOH . L 5 HOH A 81 682 163 HOH HOH . L 5 HOH A 82 683 166 HOH HOH . L 5 HOH A 83 684 169 HOH HOH . L 5 HOH A 84 685 171 HOH HOH . L 5 HOH A 85 686 173 HOH HOH . L 5 HOH A 86 687 175 HOH HOH . L 5 HOH A 87 688 178 HOH HOH . L 5 HOH A 88 689 179 HOH HOH . L 5 HOH A 89 690 180 HOH HOH . L 5 HOH A 90 691 181 HOH HOH . L 5 HOH A 91 692 182 HOH HOH . L 5 HOH A 92 693 183 HOH HOH . L 5 HOH A 93 694 187 HOH HOH . L 5 HOH A 94 695 188 HOH HOH . L 5 HOH A 95 696 189 HOH HOH . L 5 HOH A 96 697 190 HOH HOH . L 5 HOH A 97 698 191 HOH HOH . L 5 HOH A 98 699 192 HOH HOH . L 5 HOH A 99 700 194 HOH HOH . L 5 HOH A 100 701 197 HOH HOH . L 5 HOH A 101 702 199 HOH HOH . L 5 HOH A 102 703 202 HOH HOH . L 5 HOH A 103 704 205 HOH HOH . L 5 HOH A 104 705 211 HOH HOH . L 5 HOH A 105 706 212 HOH HOH . L 5 HOH A 106 707 213 HOH HOH . L 5 HOH A 107 708 216 HOH HOH . L 5 HOH A 108 709 221 HOH HOH . L 5 HOH A 109 710 222 HOH HOH . L 5 HOH A 110 711 224 HOH HOH . L 5 HOH A 111 712 225 HOH HOH . L 5 HOH A 112 713 227 HOH HOH . L 5 HOH A 113 714 230 HOH HOH . L 5 HOH A 114 715 231 HOH HOH . L 5 HOH A 115 716 232 HOH HOH . L 5 HOH A 116 717 233 HOH HOH . L 5 HOH A 117 718 242 HOH HOH . L 5 HOH A 118 719 243 HOH HOH . L 5 HOH A 119 720 245 HOH HOH . L 5 HOH A 120 721 248 HOH HOH . L 5 HOH A 121 722 254 HOH HOH . L 5 HOH A 122 723 255 HOH HOH . L 5 HOH A 123 724 256 HOH HOH . L 5 HOH A 124 725 259 HOH HOH . L 5 HOH A 125 726 261 HOH HOH . L 5 HOH A 126 727 263 HOH HOH . L 5 HOH A 127 728 270 HOH HOH . L 5 HOH A 128 729 273 HOH HOH . L 5 HOH A 129 730 275 HOH HOH . L 5 HOH A 130 731 277 HOH HOH . L 5 HOH A 131 732 279 HOH HOH . L 5 HOH A 132 733 282 HOH HOH . L 5 HOH A 133 734 284 HOH HOH . L 5 HOH A 134 735 285 HOH HOH . L 5 HOH A 135 736 288 HOH HOH . L 5 HOH A 136 737 289 HOH HOH . L 5 HOH A 137 738 291 HOH HOH . L 5 HOH A 138 739 295 HOH HOH . L 5 HOH A 139 740 296 HOH HOH . L 5 HOH A 140 741 306 HOH HOH . L 5 HOH A 141 742 317 HOH HOH . L 5 HOH A 142 743 337 HOH HOH . L 5 HOH A 143 744 338 HOH HOH . M 5 HOH B 1 603 3 HOH HOH . M 5 HOH B 2 604 4 HOH HOH . M 5 HOH B 3 605 5 HOH HOH . M 5 HOH B 4 606 6 HOH HOH . M 5 HOH B 5 607 9 HOH HOH . M 5 HOH B 6 608 10 HOH HOH . M 5 HOH B 7 609 11 HOH HOH . M 5 HOH B 8 610 12 HOH HOH . M 5 HOH B 9 611 14 HOH HOH . M 5 HOH B 10 612 18 HOH HOH . M 5 HOH B 11 613 20 HOH HOH . M 5 HOH B 12 614 22 HOH HOH . M 5 HOH B 13 615 24 HOH HOH . M 5 HOH B 14 616 30 HOH HOH . M 5 HOH B 15 617 31 HOH HOH . M 5 HOH B 16 618 33 HOH HOH . M 5 HOH B 17 619 36 HOH HOH . M 5 HOH B 18 620 37 HOH HOH . M 5 HOH B 19 621 38 HOH HOH . M 5 HOH B 20 622 42 HOH HOH . M 5 HOH B 21 623 44 HOH HOH . M 5 HOH B 22 624 48 HOH HOH . M 5 HOH B 23 625 49 HOH HOH . M 5 HOH B 24 626 53 HOH HOH . M 5 HOH B 25 627 57 HOH HOH . M 5 HOH B 26 628 59 HOH HOH . M 5 HOH B 27 629 61 HOH HOH . M 5 HOH B 28 630 65 HOH HOH . M 5 HOH B 29 631 66 HOH HOH . M 5 HOH B 30 632 67 HOH HOH . M 5 HOH B 31 633 69 HOH HOH . M 5 HOH B 32 634 71 HOH HOH . M 5 HOH B 33 635 72 HOH HOH . M 5 HOH B 34 636 73 HOH HOH . M 5 HOH B 35 637 74 HOH HOH . M 5 HOH B 36 638 75 HOH HOH . M 5 HOH B 37 639 76 HOH HOH . M 5 HOH B 38 640 77 HOH HOH . M 5 HOH B 39 641 78 HOH HOH . M 5 HOH B 40 642 79 HOH HOH . M 5 HOH B 41 643 80 HOH HOH . M 5 HOH B 42 644 81 HOH HOH . M 5 HOH B 43 645 83 HOH HOH . M 5 HOH B 44 646 85 HOH HOH . M 5 HOH B 45 647 86 HOH HOH . M 5 HOH B 46 648 89 HOH HOH . M 5 HOH B 47 649 90 HOH HOH . M 5 HOH B 48 650 92 HOH HOH . M 5 HOH B 49 651 96 HOH HOH . M 5 HOH B 50 652 98 HOH HOH . M 5 HOH B 51 653 99 HOH HOH . M 5 HOH B 52 654 100 HOH HOH . M 5 HOH B 53 655 101 HOH HOH . M 5 HOH B 54 656 103 HOH HOH . M 5 HOH B 55 657 104 HOH HOH . M 5 HOH B 56 658 105 HOH HOH . M 5 HOH B 57 659 107 HOH HOH . M 5 HOH B 58 660 110 HOH HOH . M 5 HOH B 59 661 111 HOH HOH . M 5 HOH B 60 662 112 HOH HOH . M 5 HOH B 61 663 115 HOH HOH . M 5 HOH B 62 664 120 HOH HOH . M 5 HOH B 63 665 122 HOH HOH . M 5 HOH B 64 666 123 HOH HOH . M 5 HOH B 65 667 124 HOH HOH . M 5 HOH B 66 668 125 HOH HOH . M 5 HOH B 67 669 130 HOH HOH . M 5 HOH B 68 670 133 HOH HOH . M 5 HOH B 69 671 135 HOH HOH . M 5 HOH B 70 672 137 HOH HOH . M 5 HOH B 71 673 141 HOH HOH . M 5 HOH B 72 674 142 HOH HOH . M 5 HOH B 73 675 143 HOH HOH . M 5 HOH B 74 676 146 HOH HOH . M 5 HOH B 75 677 151 HOH HOH . M 5 HOH B 76 678 153 HOH HOH . M 5 HOH B 77 679 155 HOH HOH . M 5 HOH B 78 680 156 HOH HOH . M 5 HOH B 79 681 158 HOH HOH . M 5 HOH B 80 682 159 HOH HOH . M 5 HOH B 81 683 160 HOH HOH . M 5 HOH B 82 684 161 HOH HOH . M 5 HOH B 83 685 164 HOH HOH . M 5 HOH B 84 686 165 HOH HOH . M 5 HOH B 85 687 167 HOH HOH . M 5 HOH B 86 688 168 HOH HOH . M 5 HOH B 87 689 170 HOH HOH . M 5 HOH B 88 690 172 HOH HOH . M 5 HOH B 89 691 174 HOH HOH . M 5 HOH B 90 692 176 HOH HOH . M 5 HOH B 91 693 184 HOH HOH . M 5 HOH B 92 694 185 HOH HOH . M 5 HOH B 93 695 186 HOH HOH . M 5 HOH B 94 696 193 HOH HOH . M 5 HOH B 95 697 195 HOH HOH . M 5 HOH B 96 698 196 HOH HOH . M 5 HOH B 97 699 198 HOH HOH . M 5 HOH B 98 700 200 HOH HOH . M 5 HOH B 99 701 201 HOH HOH . M 5 HOH B 100 702 203 HOH HOH . M 5 HOH B 101 703 204 HOH HOH . M 5 HOH B 102 704 206 HOH HOH . M 5 HOH B 103 705 207 HOH HOH . M 5 HOH B 104 706 208 HOH HOH . M 5 HOH B 105 707 209 HOH HOH . M 5 HOH B 106 708 210 HOH HOH . M 5 HOH B 107 709 214 HOH HOH . M 5 HOH B 108 710 215 HOH HOH . M 5 HOH B 109 711 217 HOH HOH . M 5 HOH B 110 712 219 HOH HOH . M 5 HOH B 111 713 220 HOH HOH . M 5 HOH B 112 714 223 HOH HOH . M 5 HOH B 113 715 226 HOH HOH . M 5 HOH B 114 716 228 HOH HOH . M 5 HOH B 115 717 229 HOH HOH . M 5 HOH B 116 718 235 HOH HOH . M 5 HOH B 117 719 236 HOH HOH . M 5 HOH B 118 720 237 HOH HOH . M 5 HOH B 119 721 238 HOH HOH . M 5 HOH B 120 722 239 HOH HOH . M 5 HOH B 121 723 240 HOH HOH . M 5 HOH B 122 724 241 HOH HOH . M 5 HOH B 123 725 244 HOH HOH . M 5 HOH B 124 726 246 HOH HOH . M 5 HOH B 125 727 247 HOH HOH . M 5 HOH B 126 728 249 HOH HOH . M 5 HOH B 127 729 250 HOH HOH . M 5 HOH B 128 730 251 HOH HOH . M 5 HOH B 129 731 252 HOH HOH . M 5 HOH B 130 732 253 HOH HOH . M 5 HOH B 131 733 257 HOH HOH . M 5 HOH B 132 734 258 HOH HOH . M 5 HOH B 133 735 260 HOH HOH . M 5 HOH B 134 736 262 HOH HOH . M 5 HOH B 135 737 264 HOH HOH . M 5 HOH B 136 738 265 HOH HOH . M 5 HOH B 137 739 266 HOH HOH . M 5 HOH B 138 740 269 HOH HOH . M 5 HOH B 139 741 271 HOH HOH . M 5 HOH B 140 742 272 HOH HOH . M 5 HOH B 141 743 276 HOH HOH . M 5 HOH B 142 744 280 HOH HOH . M 5 HOH B 143 745 293 HOH HOH . M 5 HOH B 144 746 294 HOH HOH . M 5 HOH B 145 747 299 HOH HOH . M 5 HOH B 146 748 303 HOH HOH . M 5 HOH B 147 749 305 HOH HOH . M 5 HOH B 148 750 310 HOH HOH . M 5 HOH B 149 751 311 HOH HOH . M 5 HOH B 150 752 315 HOH HOH . M 5 HOH B 151 753 319 HOH HOH . M 5 HOH B 152 754 325 HOH HOH . M 5 HOH B 153 755 333 HOH HOH . M 5 HOH B 154 756 336 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . G 4 6.909 0.113 18.75 1 14.03 ? PB GDP 501 A 1 HETATM 2 O O1B GDP . . . G 4 7.53 -0.845 17.824 1 13.88 ? O1B GDP 501 A 1 HETATM 3 O O2B GDP . . . G 4 5.835 -0.441 19.559 1 15.53 ? O2B GDP 501 A 1 HETATM 4 O O3B GDP . . . G 4 7.886 0.772 19.662 1 14.47 ? O3B GDP 501 A 1 HETATM 5 O O3A GDP . . . G 4 6.128 1.178 17.807 1 16.33 ? O3A GDP 501 A 1 HETATM 6 P PA GDP . . . G 4 6.27 1.258 16.191 1 16.31 ? PA GDP 501 A 1 HETATM 7 O O1A GDP . . . G 4 7.618 1.52 15.697 1 17.81 ? O1A GDP 501 A 1 HETATM 8 O O2A GDP . . . G 4 5.174 0.51 15.558 1 18.22 ? O2A GDP 501 A 1 HETATM 9 O O5' GDP . . . G 4 5.114 2.366 16.279 1 20.18 ? O5' GDP 501 A 1 HETATM 10 C C5' GDP . . . G 4 5.139 3.681 16.797 1 17.69 ? C5' GDP 501 A 1 HETATM 11 C C4' GDP . . . G 4 4.299 4.633 15.924 1 17.23 ? C4' GDP 501 A 1 HETATM 12 O O4' GDP . . . G 4 5.044 5.845 15.96 1 15.99 ? O4' GDP 501 A 1 HETATM 13 C C3' GDP . . . G 4 4.185 4.256 14.425 1 17.08 ? C3' GDP 501 A 1 HETATM 14 O O3' GDP . . . G 4 2.914 4.792 13.989 1 17.98 ? O3' GDP 501 A 1 HETATM 15 C C2' GDP . . . G 4 5.375 5.005 13.807 1 16.63 ? C2' GDP 501 A 1 HETATM 16 O O2' GDP . . . G 4 5.179 5.342 12.406 1 17.59 ? O2' GDP 501 A 1 HETATM 17 C C1' GDP . . . G 4 5.455 6.253 14.657 1 16.05 ? C1' GDP 501 A 1 HETATM 18 N N9 GDP . . . G 4 6.829 6.737 14.775 1 14.31 ? N9 GDP 501 A 1 HETATM 19 C C8 GDP . . . G 4 8.016 6.038 14.962 1 14.07 ? C8 GDP 501 A 1 HETATM 20 N N7 GDP . . . G 4 9.081 6.792 15.022 1 12.9 ? N7 GDP 501 A 1 HETATM 21 C C5 GDP . . . G 4 8.549 8.074 14.869 1 13.23 ? C5 GDP 501 A 1 HETATM 22 C C6 GDP . . . G 4 9.156 9.344 14.833 1 13.18 ? C6 GDP 501 A 1 HETATM 23 O O6 GDP . . . G 4 10.356 9.616 14.946 1 14.01 ? O6 GDP 501 A 1 HETATM 24 N N1 GDP . . . G 4 8.255 10.389 14.655 1 13.04 ? N1 GDP 501 A 1 HETATM 25 C C2 GDP . . . G 4 6.883 10.246 14.513 1 14.32 ? C2 GDP 501 A 1 HETATM 26 N N2 GDP . . . G 4 6.147 11.334 14.346 1 14.63 ? N2 GDP 501 A 1 HETATM 27 N N3 GDP . . . G 4 6.286 9.055 14.537 1 13.7 ? N3 GDP 501 A 1 HETATM 28 C C4 GDP . . . G 4 7.165 8.027 14.712 1 13.88 ? C4 GDP 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 28 #