data_1F79 # _model_server_result.job_id A6Ys5H_lKAlUeQAfFMFDLQ _model_server_result.datetime_utc '2024-10-19 19:30:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":28}' # _entry.id 1F79 # _exptl.entry_id 1F79 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 161.116 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT HEXAMMINE(III)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1F79 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N1 G 1 A G 1 1_555 A N3 C 27 A C 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 G 1 A G 1 1_555 A O2 C 27 A C 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 G 1 A G 1 1_555 A N4 C 27 A C 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 G 2 A G 2 1_555 A N3 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 G 2 A G 2 1_555 A O2 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 G 2 A G 2 1_555 A N4 C 26 A C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 A 3 A A 3 1_555 A N3 U 25 A U 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 A 3 A A 3 1_555 A O4 U 25 A U 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 A 4 A A 4 1_555 A N3 U 24 A U 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N6 A 4 A A 4 1_555 A O4 U 24 A U 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N1 G 5 A G 5 1_555 A N3 C 23 A C 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N2 G 5 A G 5 1_555 A O2 C 23 A C 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O6 G 5 A G 5 1_555 A N4 C 23 A C 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog14 A N3 U 6 A U 6 1_555 A O6 G 22 A G 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog15 A O2 U 6 A U 6 1_555 A N1 G 22 A G 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N3 C 8 A C 8 1_555 A N1 G 21 A G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N4 C 8 A C 8 1_555 A O6 G 21 A G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O2 C 8 A C 8 1_555 A N2 G 21 A G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 G 9 A G 9 1_555 A N3 C 20 A C 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 G 9 A G 9 1_555 A O2 C 20 A C 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 G 9 A G 9 1_555 A N4 C 20 A C 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 G 10 A G 10 1_555 A N3 C 19 A C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N2 G 10 A G 10 1_555 A O2 C 19 A C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O6 G 10 A G 10 1_555 A N4 C 19 A C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N3 U 11 A U 11 1_555 A N1 A 18 A A 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O4 U 11 A U 11 1_555 A N6 A 18 A A 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N3 C 12 A C 12 1_555 A N1 G 17 A G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N4 C 12 A C 12 1_555 A O6 G 17 A G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O2 C 12 A C 12 1_555 A N2 G 17 A G 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'U-G MISPAIR' hydrog30 A O2 U 13 A U 13 1_555 A N1 G 16 A G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co H18 N6 3' _chem_comp.formula_weight 161.116 _chem_comp.id NCO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT HEXAMMINE(III)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CO N1 NCO sing 116 n n CO N2 NCO sing 117 n n CO N3 NCO sing 118 n n CO N4 NCO sing 119 n n CO N5 NCO sing 120 n n CO N6 NCO sing 121 n n N1 HN11 NCO sing 122 n n N1 HN12 NCO sing 123 n n N1 HN13 NCO sing 124 n n N2 HN21 NCO sing 125 n n N2 HN22 NCO sing 126 n n N2 HN23 NCO sing 127 n n N3 HN31 NCO sing 128 n n N3 HN32 NCO sing 129 n n N3 HN33 NCO sing 130 n n N4 HN41 NCO sing 131 n n N4 HN42 NCO sing 132 n n N4 HN43 NCO sing 133 n n N5 HN51 NCO sing 134 n n N5 HN52 NCO sing 135 n n N5 HN53 NCO sing 136 n n N6 HN61 NCO sing 137 n n N6 HN62 NCO sing 138 n n N6 HN63 NCO sing 139 n n # _atom_sites.entry_id 1F79 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NCO _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 28 _pdbx_nonpoly_scheme.auth_seq_num 28 _pdbx_nonpoly_scheme.pdb_mon_id NCO _pdbx_nonpoly_scheme.auth_mon_id NCO _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CO CO NCO . . . B 2 6.441 14.368 8.059 1 0 ? CO NCO 28 A 1 HETATM 2 N N1 NCO . . . B 2 7.126 15.694 6.737 1 0 ? N1 NCO 28 A 1 HETATM 3 N N2 NCO . . . B 2 5.752 13.041 9.377 1 0 ? N2 NCO 28 A 1 HETATM 4 N N3 NCO . . . B 2 5.38 13.477 6.625 1 0 ? N3 NCO 28 A 1 HETATM 5 N N4 NCO . . . B 2 7.987 13.172 7.667 1 0 ? N4 NCO 28 A 1 HETATM 6 N N5 NCO . . . B 2 7.505 15.258 9.492 1 0 ? N5 NCO 28 A 1 HETATM 7 N N6 NCO . . . B 2 4.892 15.563 8.456 1 0 ? N6 NCO 28 A 1 HETATM 8 H HN11 NCO . . . B 2 6.402 16.334 6.446 1 0 ? HN11 NCO 28 A 1 HETATM 9 H HN12 NCO . . . B 2 7.879 16.246 7.123 1 0 ? HN12 NCO 28 A 1 HETATM 10 H HN13 NCO . . . B 2 7.48 15.243 5.905 1 0 ? HN13 NCO 28 A 1 HETATM 11 H HN21 NCO . . . B 2 6.468 12.381 9.647 1 0 ? HN21 NCO 28 A 1 HETATM 12 H HN22 NCO . . . B 2 5.421 13.49 10.218 1 0 ? HN22 NCO 28 A 1 HETATM 13 H HN23 NCO . . . B 2 4.982 12.511 8.997 1 0 ? HN23 NCO 28 A 1 HETATM 14 H HN31 NCO . . . B 2 4.405 13.733 6.671 1 0 ? HN31 NCO 28 A 1 HETATM 15 H HN32 NCO . . . B 2 5.715 13.728 5.706 1 0 ? HN32 NCO 28 A 1 HETATM 16 H HN33 NCO . . . B 2 5.429 12.471 6.698 1 0 ? HN33 NCO 28 A 1 HETATM 17 H HN41 NCO . . . B 2 8.677 13.634 7.093 1 0 ? HN41 NCO 28 A 1 HETATM 18 H HN42 NCO . . . B 2 8.45 12.876 8.514 1 0 ? HN42 NCO 28 A 1 HETATM 19 H HN43 NCO . . . B 2 7.697 12.339 7.177 1 0 ? HN43 NCO 28 A 1 HETATM 20 H HN51 NCO . . . B 2 8.484 15.018 9.429 1 0 ? HN51 NCO 28 A 1 HETATM 21 H HN52 NCO . . . B 2 7.44 16.264 9.433 1 0 ? HN52 NCO 28 A 1 HETATM 22 H HN53 NCO . . . B 2 7.188 14.988 10.412 1 0 ? HN53 NCO 28 A 1 HETATM 23 H HN61 NCO . . . B 2 5.181 16.395 8.947 1 0 ? HN61 NCO 28 A 1 HETATM 24 H HN62 NCO . . . B 2 4.426 15.86 7.61 1 0 ? HN62 NCO 28 A 1 HETATM 25 H HN63 NCO . . . B 2 4.204 15.098 9.031 1 0 ? HN63 NCO 28 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #