data_1F7K # _model_server_result.job_id 1LQAdxu4MblMISbGZNs9kA _model_server_result.datetime_utc '2025-03-05 04:16:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f7k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 1F7K # _exptl.entry_id 1F7K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1F7K _cell.length_a 79.13 _cell.length_b 79.13 _cell.length_c 87.21 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS trimeric 3 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PQS trimeric 3 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1,2,3 B,F,G,I 2 1 B,F,G,I 3 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 39.565 68.52859 0 5 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -39.565 68.52859 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 64 A ASP 64 1_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc2 A OD1 ASP 64 A ASP 64 2_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc3 A OD1 ASP 64 A ASP 64 3_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc4 H O HOH . A HOH 403 1_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc5 H O HOH . A HOH 403 2_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc6 H O HOH . A HOH 403 3_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc7 H O HOH . A HOH 403 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc8 H O HOH . A HOH 403 2_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc9 H O HOH . A HOH 403 3_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc10 H O HOH . A HOH 424 1_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc11 H O HOH . A HOH 424 2_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc12 H O HOH . A HOH 424 3_555 D MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc13 B OD1 ASP 64 B ASP 264 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc14 B OD1 ASP 64 B ASP 264 3_565 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc15 B OD1 ASP 64 B ASP 264 2_665 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? metalc ? metalc16 I O HOH . B HOH 414 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc17 I O HOH . B HOH 414 2_665 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc18 I O HOH . B HOH 414 3_565 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc19 I O HOH . B HOH 604 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc20 I O HOH . B HOH 604 2_665 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc21 I O HOH . B HOH 604 3_565 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1F7K _atom_sites.fract_transf_matrix[1][1] 0.012637 _atom_sites.fract_transf_matrix[1][2] 0.007296 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014592 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 701 701 MG MG . D 2 MG A 1 703 703 MG MG . E 3 UMP A 1 704 118 UMP UMP . F 2 MG B 1 702 702 MG MG . G 3 UMP B 1 703 318 UMP UMP . H 4 HOH A 1 401 401 HOH H2O . H 4 HOH A 2 402 402 HOH H2O . H 4 HOH A 3 403 403 HOH H2O . H 4 HOH A 4 404 404 HOH H2O . H 4 HOH A 5 405 405 HOH H2O . H 4 HOH A 6 406 406 HOH H2O . H 4 HOH A 7 407 407 HOH H2O . H 4 HOH A 8 408 408 HOH H2O . H 4 HOH A 9 410 410 HOH H2O . H 4 HOH A 10 412 412 HOH H2O . H 4 HOH A 11 413 413 HOH H2O . H 4 HOH A 12 415 415 HOH H2O . H 4 HOH A 13 416 416 HOH H2O . H 4 HOH A 14 417 417 HOH H2O . H 4 HOH A 15 418 418 HOH H2O . H 4 HOH A 16 419 419 HOH H2O . H 4 HOH A 17 420 420 HOH H2O . H 4 HOH A 18 421 421 HOH H2O . H 4 HOH A 19 424 424 HOH H2O . H 4 HOH A 20 425 425 HOH H2O . H 4 HOH A 21 426 426 HOH H2O . H 4 HOH A 22 427 427 HOH H2O . H 4 HOH A 23 429 429 HOH H2O . H 4 HOH A 24 432 432 HOH H2O . H 4 HOH A 25 433 433 HOH H2O . H 4 HOH A 26 434 434 HOH H2O . H 4 HOH A 27 436 436 HOH H2O . H 4 HOH A 28 437 437 HOH H2O . H 4 HOH A 29 439 439 HOH H2O . H 4 HOH A 30 440 440 HOH H2O . H 4 HOH A 31 442 442 HOH H2O . H 4 HOH A 32 444 444 HOH H2O . H 4 HOH A 33 445 445 HOH H2O . H 4 HOH A 34 447 447 HOH H2O . H 4 HOH A 35 448 448 HOH H2O . H 4 HOH A 36 449 449 HOH H2O . H 4 HOH A 37 451 451 HOH H2O . H 4 HOH A 38 452 452 HOH H2O . H 4 HOH A 39 453 453 HOH H2O . H 4 HOH A 40 454 454 HOH H2O . H 4 HOH A 41 455 455 HOH H2O . H 4 HOH A 42 456 456 HOH H2O . H 4 HOH A 43 458 458 HOH H2O . H 4 HOH A 44 459 459 HOH H2O . H 4 HOH A 45 460 460 HOH H2O . H 4 HOH A 46 461 461 HOH H2O . H 4 HOH A 47 462 462 HOH H2O . H 4 HOH A 48 464 464 HOH H2O . H 4 HOH A 49 465 465 HOH H2O . H 4 HOH A 50 466 466 HOH H2O . H 4 HOH A 51 468 468 HOH H2O . H 4 HOH A 52 469 469 HOH H2O . H 4 HOH A 53 471 471 HOH H2O . H 4 HOH A 54 472 472 HOH H2O . H 4 HOH A 55 473 473 HOH H2O . H 4 HOH A 56 474 474 HOH H2O . H 4 HOH A 57 475 475 HOH H2O . H 4 HOH A 58 477 477 HOH H2O . H 4 HOH A 59 479 479 HOH H2O . H 4 HOH A 60 481 481 HOH H2O . H 4 HOH A 61 482 482 HOH H2O . H 4 HOH A 62 484 484 HOH H2O . H 4 HOH A 63 486 486 HOH H2O . H 4 HOH A 64 487 487 HOH H2O . H 4 HOH A 65 488 488 HOH H2O . H 4 HOH A 66 489 489 HOH H2O . H 4 HOH A 67 490 490 HOH H2O . H 4 HOH A 68 492 492 HOH H2O . H 4 HOH A 69 493 493 HOH H2O . H 4 HOH A 70 494 494 HOH H2O . H 4 HOH A 71 495 495 HOH H2O . H 4 HOH A 72 497 497 HOH H2O . H 4 HOH A 73 498 498 HOH H2O . H 4 HOH A 74 499 499 HOH H2O . H 4 HOH A 75 500 500 HOH H2O . H 4 HOH A 76 501 501 HOH H2O . H 4 HOH A 77 502 502 HOH H2O . H 4 HOH A 78 505 505 HOH H2O . H 4 HOH A 79 506 506 HOH H2O . H 4 HOH A 80 510 510 HOH H2O . H 4 HOH A 81 511 511 HOH H2O . H 4 HOH A 82 513 513 HOH H2O . H 4 HOH A 83 514 514 HOH H2O . H 4 HOH A 84 515 515 HOH H2O . H 4 HOH A 85 516 516 HOH H2O . H 4 HOH A 86 517 517 HOH H2O . H 4 HOH A 87 518 518 HOH H2O . H 4 HOH A 88 520 520 HOH H2O . H 4 HOH A 89 521 521 HOH H2O . H 4 HOH A 90 522 522 HOH H2O . H 4 HOH A 91 524 524 HOH H2O . H 4 HOH A 92 526 526 HOH H2O . H 4 HOH A 93 527 527 HOH H2O . H 4 HOH A 94 601 601 HOH H2O . H 4 HOH A 95 602 602 HOH H2O . H 4 HOH A 96 603 603 HOH H2O . I 4 HOH B 1 409 409 HOH H2O . I 4 HOH B 2 411 411 HOH H2O . I 4 HOH B 3 414 414 HOH H2O . I 4 HOH B 4 422 422 HOH H2O . I 4 HOH B 5 423 423 HOH H2O . I 4 HOH B 6 428 428 HOH H2O . I 4 HOH B 7 430 430 HOH H2O . I 4 HOH B 8 431 431 HOH H2O . I 4 HOH B 9 435 435 HOH H2O . I 4 HOH B 10 438 438 HOH H2O . I 4 HOH B 11 441 441 HOH H2O . I 4 HOH B 12 443 443 HOH H2O . I 4 HOH B 13 446 446 HOH H2O . I 4 HOH B 14 450 450 HOH H2O . I 4 HOH B 15 457 457 HOH H2O . I 4 HOH B 16 463 463 HOH H2O . I 4 HOH B 17 467 467 HOH H2O . I 4 HOH B 18 470 470 HOH H2O . I 4 HOH B 19 476 476 HOH H2O . I 4 HOH B 20 478 478 HOH H2O . I 4 HOH B 21 480 480 HOH H2O . I 4 HOH B 22 483 483 HOH H2O . I 4 HOH B 23 485 485 HOH H2O . I 4 HOH B 24 491 491 HOH H2O . I 4 HOH B 25 496 496 HOH H2O . I 4 HOH B 26 503 503 HOH H2O . I 4 HOH B 27 504 504 HOH H2O . I 4 HOH B 28 507 507 HOH H2O . I 4 HOH B 29 508 508 HOH H2O . I 4 HOH B 30 509 509 HOH H2O . I 4 HOH B 31 512 512 HOH H2O . I 4 HOH B 32 519 519 HOH H2O . I 4 HOH B 33 523 523 HOH H2O . I 4 HOH B 34 525 525 HOH H2O . I 4 HOH B 35 604 604 HOH H2O . I 4 HOH B 36 605 605 HOH H2O . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 25.05 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 27.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #