data_1F7L # _model_server_result.job_id ZJdejaEry7qMJBaWpzj5DQ _model_server_result.datetime_utc '2024-11-29 20:10:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1f7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 1F7L # _exptl.entry_id 1F7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1F7L _cell.length_a 55.82 _cell.length_b 55.82 _cell.length_c 92.288 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1F7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 8 A ASP 8 1_555 B CA CA . A CA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc2 A OD2 ASP 8 A ASP 8 1_555 B CA CA . A CA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 A OE1 GLU 58 A GLU 58 1_555 B CA CA . A CA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc4 A OE2 GLU 108 A GLU 108 1_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc5 A OE1 GLU 108 A GLU 108 1_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc6 A OE1 GLU 108 A GLU 108 2_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc7 A OE2 GLU 108 A GLU 108 3_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc8 A OE1 GLU 108 A GLU 108 3_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc9 A OE2 GLU 108 A GLU 108 2_555 D CA CA . A CA 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc10 B CA CA . A CA 130 1_555 E O2A COA . A COA 133 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc11 B CA CA . A CA 130 1_555 F O HOH . A HOH 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc12 B CA CA . A CA 130 1_555 F O HOH . A HOH 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc13 B CA CA . A CA 130 1_555 F O HOH . A HOH 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc14 D CA CA . A CA 132 1_555 F O HOH . A HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc15 D CA CA . A CA 132 1_555 F O HOH . A HOH 154 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc16 D CA CA . A CA 132 1_555 F O HOH . A HOH 154 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1F7L _atom_sites.fract_transf_matrix[1][1] 0.017915 _atom_sites.fract_transf_matrix[1][2] 0.010343 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010836 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 130 1 CA CA2 . C 3 CL A 1 131 2 CL CL1 . D 2 CA A 1 132 3 CA CA2 . E 4 COA A 1 133 120 COA COA . F 5 HOH A 1 134 1 HOH HOH . F 5 HOH A 2 135 2 HOH HOH . F 5 HOH A 3 136 3 HOH HOH . F 5 HOH A 4 137 4 HOH HOH . F 5 HOH A 5 138 5 HOH HOH . F 5 HOH A 6 139 6 HOH HOH . F 5 HOH A 7 140 7 HOH HOH . F 5 HOH A 8 141 8 HOH HOH . F 5 HOH A 9 142 9 HOH HOH . F 5 HOH A 10 143 10 HOH HOH . F 5 HOH A 11 144 11 HOH HOH . F 5 HOH A 12 145 12 HOH HOH . F 5 HOH A 13 146 13 HOH HOH . F 5 HOH A 14 147 14 HOH HOH . F 5 HOH A 15 148 15 HOH HOH . F 5 HOH A 16 149 16 HOH HOH . F 5 HOH A 17 150 17 HOH HOH . F 5 HOH A 18 151 18 HOH HOH . F 5 HOH A 19 152 19 HOH HOH . F 5 HOH A 20 153 20 HOH HOH . F 5 HOH A 21 154 21 HOH HOH . F 5 HOH A 22 155 22 HOH HOH . F 5 HOH A 23 156 23 HOH HOH . F 5 HOH A 24 157 24 HOH HOH . F 5 HOH A 25 158 25 HOH HOH . F 5 HOH A 26 159 26 HOH HOH . F 5 HOH A 27 160 27 HOH HOH . F 5 HOH A 28 161 28 HOH HOH . F 5 HOH A 29 162 29 HOH HOH . F 5 HOH A 30 163 30 HOH HOH . F 5 HOH A 31 164 31 HOH HOH . F 5 HOH A 32 165 32 HOH HOH . F 5 HOH A 33 166 33 HOH HOH . F 5 HOH A 34 167 34 HOH HOH . F 5 HOH A 35 168 35 HOH HOH . F 5 HOH A 36 169 36 HOH HOH . F 5 HOH A 37 170 37 HOH HOH . F 5 HOH A 38 171 38 HOH HOH . F 5 HOH A 39 172 39 HOH HOH . F 5 HOH A 40 173 40 HOH HOH . F 5 HOH A 41 174 41 HOH HOH . F 5 HOH A 42 175 42 HOH HOH . F 5 HOH A 43 176 43 HOH HOH . F 5 HOH A 44 177 44 HOH HOH . F 5 HOH A 45 178 45 HOH HOH . F 5 HOH A 46 179 46 HOH HOH . F 5 HOH A 47 180 47 HOH HOH . F 5 HOH A 48 181 48 HOH HOH . F 5 HOH A 49 182 49 HOH HOH . F 5 HOH A 50 183 50 HOH HOH . F 5 HOH A 51 184 51 HOH HOH . F 5 HOH A 52 185 52 HOH HOH . F 5 HOH A 53 186 53 HOH HOH . F 5 HOH A 54 187 54 HOH HOH . F 5 HOH A 55 188 55 HOH HOH . F 5 HOH A 56 189 56 HOH HOH . F 5 HOH A 57 190 57 HOH HOH . F 5 HOH A 58 191 58 HOH HOH . F 5 HOH A 59 192 59 HOH HOH . F 5 HOH A 60 193 60 HOH HOH . F 5 HOH A 61 194 61 HOH HOH . F 5 HOH A 62 195 62 HOH HOH . F 5 HOH A 63 196 63 HOH HOH . F 5 HOH A 64 197 64 HOH HOH . F 5 HOH A 65 198 65 HOH HOH . F 5 HOH A 66 199 66 HOH HOH . F 5 HOH A 67 200 67 HOH HOH . F 5 HOH A 68 201 68 HOH HOH . F 5 HOH A 69 202 69 HOH HOH . F 5 HOH A 70 203 70 HOH HOH . F 5 HOH A 71 204 71 HOH HOH . F 5 HOH A 72 205 72 HOH HOH . F 5 HOH A 73 206 73 HOH HOH . F 5 HOH A 74 207 74 HOH HOH . F 5 HOH A 75 208 75 HOH HOH . F 5 HOH A 76 209 76 HOH HOH . F 5 HOH A 77 210 77 HOH HOH . F 5 HOH A 78 211 78 HOH HOH . F 5 HOH A 79 212 79 HOH HOH . F 5 HOH A 80 213 80 HOH HOH . F 5 HOH A 81 214 81 HOH HOH . F 5 HOH A 82 215 82 HOH HOH . F 5 HOH A 83 216 83 HOH HOH . F 5 HOH A 84 217 84 HOH HOH . F 5 HOH A 85 218 85 HOH HOH . F 5 HOH A 86 219 86 HOH HOH . F 5 HOH A 87 220 87 HOH HOH . F 5 HOH A 88 221 88 HOH HOH . F 5 HOH A 89 222 89 HOH HOH . F 5 HOH A 90 223 90 HOH HOH . F 5 HOH A 91 224 91 HOH HOH . F 5 HOH A 92 225 92 HOH HOH . F 5 HOH A 93 226 93 HOH HOH . F 5 HOH A 94 227 94 HOH HOH . F 5 HOH A 95 228 95 HOH HOH . F 5 HOH A 96 229 96 HOH HOH . F 5 HOH A 97 230 97 HOH HOH . F 5 HOH A 98 231 98 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.365 _atom_site.Cartn_y 8.523 _atom_site.Cartn_z 54.928 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 130 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #