data_1F9B
#
_model_server_result.job_id            6p2oHPVJJmXqw8vE-wrCzg 
_model_server_result.datetime_utc      '2025-07-21 13:35:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1f9b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":695}' 
#
_entry.id    1F9B 
#
_exptl.entry_id    1F9B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              149.147 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3H-INDOLE-5,6-DIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1F9B 
_cell.length_a            85.037 
_cell.length_b            99.815 
_cell.length_c            103.425 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1F9B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 15 A CYS 9 1_555 A SG CYS 51 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
disulf ? disulf2 A SG CYS 25 A CYS 19 1_555 A SG CYS 42 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 121 A CYS 115 1_555 A SG CYS 204 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
disulf ? disulf4 A SG CYS 163 A CYS 157 1_555 A SG CYS 179 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf5 A SG CYS 166 A CYS 160 1_555 A SG CYS 189 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf6 A SG CYS 176 A CYS 170 1_555 A SG CYS 187 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf7 A SG CYS 237 A CYS 231 1_555 A SG CYS 251 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf8 A SG CYS 354 A CYS 348 1_555 A SG CYS 386 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
disulf ? disulf9 A SG CYS 364 A CYS 358 1_555 A SG CYS 377 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf10 A SG CYS 411 A CYS 405 1_555 A SG CYS 690 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf11 A SG CYS 431 A CYS 425 1_555 A SG CYS 653 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf12 A SG CYS 463 A CYS 457 1_555 A SG CYS 538 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf13 A SG CYS 487 A CYS 481 1_555 A SG CYS 681 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf14 A SG CYS 497 A CYS 491 1_555 A SG CYS 511 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf15 A SG CYS 508 A CYS 502 1_555 A SG CYS 521 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf16 A SG CYS 579 A CYS 573 1_555 A SG CYS 593 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf17 A SG CYS 631 A CYS 625 1_555 A SG CYS 636 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc1 A OD1 ASP 66 A ASP 60 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc2 A OH TYR 98 A TYR 92 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? 
metalc ? metalc3 A OH TYR 198 A TYR 192 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? 
metalc ? metalc4 A NE2 HIS 259 A HIS 253 1_555 B FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc5 A OD1 ASP 401 A ASP 395 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc6 A OH TYR 439 A TYR 433 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc7 A OH TYR 532 A TYR 526 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? 
metalc ? metalc8 A NE2 HIS 601 A HIS 595 1_555 C FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc9 B FE FE . A FE 690 1_555 D O2 BCT . A BCT 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? 
metalc ? metalc10 B FE FE . A FE 690 1_555 D O1 BCT . A BCT 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? 
metalc ? metalc11 C FE FE . A FE 691 1_555 E O1 BCT . A BCT 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc12 C FE FE . A FE 691 1_555 E O2 BCT . A BCT 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? 
#
_chem_comp.formula           'C8 H7 N O2' 
_chem_comp.formula_weight    149.147 
_chem_comp.id                3ID 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3H-INDOLE-5,6-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 3ID sing 1 n y 
N1 C8 3ID sing 2 n y 
N1 HN1 3ID sing 3 n n 
C2 C3 3ID doub 4 n y 
C2 H2 3ID sing 5 n n 
C3 C9 3ID sing 6 n y 
C3 H3 3ID sing 7 n n 
C4 C5 3ID doub 8 n y 
C4 C9 3ID sing 9 n y 
C4 H4 3ID sing 10 n n 
C5 C6 3ID sing 11 n y 
C5 O1 3ID sing 12 n n 
C6 C7 3ID doub 13 n y 
C6 O2 3ID sing 14 n n 
C7 C8 3ID sing 15 n y 
C7 H7 3ID sing 16 n n 
C8 C9 3ID doub 17 n y 
O1 H1O 3ID sing 18 n n 
O2 H2O 3ID sing 19 n n 
#
_atom_sites.entry_id                     1F9B 
_atom_sites.fract_transf_matrix[1][1]    0.01176 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009669 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 690 690 FE FE . 
C 2 FE A 1 691 691 FE FE . 
D 3 BCT A 1 692 692 BCT CAR . 
E 3 BCT A 1 693 693 BCT CAR . 
F 4 3ID A 1 694 694 3ID IND . 
G 4 3ID A 1 695 695 3ID IND . 
H 5 HOH A 1 696 696 HOH WAT . 
H 5 HOH A 2 697 697 HOH WAT . 
H 5 HOH A 3 698 698 HOH WAT . 
H 5 HOH A 4 699 699 HOH WAT . 
H 5 HOH A 5 700 700 HOH WAT . 
H 5 HOH A 6 701 701 HOH WAT . 
H 5 HOH A 7 702 702 HOH WAT . 
H 5 HOH A 8 703 703 HOH WAT . 
H 5 HOH A 9 704 704 HOH WAT . 
H 5 HOH A 10 705 705 HOH WAT . 
H 5 HOH A 11 706 706 HOH WAT . 
H 5 HOH A 12 707 707 HOH WAT . 
H 5 HOH A 13 708 708 HOH WAT . 
H 5 HOH A 14 709 709 HOH WAT . 
H 5 HOH A 15 710 710 HOH WAT . 
H 5 HOH A 16 711 711 HOH WAT . 
H 5 HOH A 17 712 712 HOH WAT . 
H 5 HOH A 18 713 713 HOH WAT . 
H 5 HOH A 19 714 714 HOH WAT . 
H 5 HOH A 20 715 715 HOH WAT . 
H 5 HOH A 21 716 716 HOH WAT . 
H 5 HOH A 22 717 717 HOH WAT . 
H 5 HOH A 23 718 718 HOH WAT . 
H 5 HOH A 24 719 719 HOH WAT . 
H 5 HOH A 25 720 720 HOH WAT . 
H 5 HOH A 26 721 721 HOH WAT . 
H 5 HOH A 27 722 722 HOH WAT . 
H 5 HOH A 28 723 723 HOH WAT . 
H 5 HOH A 29 724 724 HOH WAT . 
H 5 HOH A 30 725 725 HOH WAT . 
H 5 HOH A 31 726 726 HOH WAT . 
H 5 HOH A 32 727 727 HOH WAT . 
H 5 HOH A 33 728 728 HOH WAT . 
H 5 HOH A 34 729 729 HOH WAT . 
H 5 HOH A 35 730 730 HOH WAT . 
H 5 HOH A 36 731 731 HOH WAT . 
H 5 HOH A 37 732 732 HOH WAT . 
H 5 HOH A 38 733 733 HOH WAT . 
H 5 HOH A 39 734 734 HOH WAT . 
H 5 HOH A 40 735 735 HOH WAT . 
H 5 HOH A 41 736 736 HOH WAT . 
H 5 HOH A 42 737 737 HOH WAT . 
H 5 HOH A 43 738 738 HOH WAT . 
H 5 HOH A 44 739 739 HOH WAT . 
H 5 HOH A 45 740 740 HOH WAT . 
H 5 HOH A 46 741 741 HOH WAT . 
H 5 HOH A 47 742 742 HOH WAT . 
H 5 HOH A 48 743 743 HOH WAT . 
H 5 HOH A 49 744 744 HOH WAT . 
H 5 HOH A 50 745 745 HOH WAT . 
H 5 HOH A 51 746 746 HOH WAT . 
H 5 HOH A 52 747 747 HOH WAT . 
H 5 HOH A 53 748 748 HOH WAT . 
H 5 HOH A 54 749 749 HOH WAT . 
H 5 HOH A 55 750 750 HOH WAT . 
H 5 HOH A 56 751 751 HOH WAT . 
H 5 HOH A 57 752 752 HOH WAT . 
H 5 HOH A 58 753 753 HOH WAT . 
H 5 HOH A 59 754 754 HOH WAT . 
H 5 HOH A 60 755 755 HOH WAT . 
H 5 HOH A 61 756 756 HOH WAT . 
H 5 HOH A 62 757 757 HOH WAT . 
H 5 HOH A 63 758 758 HOH WAT . 
H 5 HOH A 64 759 759 HOH WAT . 
H 5 HOH A 65 760 760 HOH WAT . 
H 5 HOH A 66 761 761 HOH WAT . 
H 5 HOH A 67 762 762 HOH WAT . 
H 5 HOH A 68 763 763 HOH WAT . 
H 5 HOH A 69 764 764 HOH WAT . 
H 5 HOH A 70 765 765 HOH WAT . 
H 5 HOH A 71 766 766 HOH WAT . 
H 5 HOH A 72 767 767 HOH WAT . 
H 5 HOH A 73 768 768 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 3ID . . . G 4 45.428 18.567 38.077 1 36.4 ? N1 3ID 695 A 1 
HETATM 2 C C2 3ID . . . G 4 45.039 18.009 39.318 1 33.1 ? C2 3ID 695 A 1 
HETATM 3 C C3 3ID . . . G 4 46.334 18.602 40.003 1 33.1 ? C3 3ID 695 A 1 
HETATM 4 C C4 3ID . . . G 4 48.871 18.37 38.98 1 35.2 ? C4 3ID 695 A 1 
HETATM 5 C C5 3ID . . . G 4 49.483 17.45 38.023 1 39.1 ? C5 3ID 695 A 1 
HETATM 6 C C6 3ID . . . G 4 48.613 16.896 36.923 1 41.6 ? C6 3ID 695 A 1 
HETATM 7 C C7 3ID . . . G 4 47.171 17.057 37.032 1 40.1 ? C7 3ID 695 A 1 
HETATM 8 C C8 3ID . . . G 4 46.725 18.196 37.766 1 36 ? C8 3ID 695 A 1 
HETATM 9 C C9 3ID . . . G 4 47.482 18.692 38.88 1 33.4 ? C9 3ID 695 A 1 
HETATM 10 O O1 3ID . . . G 4 50.591 16.624 38.522 1 37.3 ? O1 3ID 695 A 1 
HETATM 11 O O2 3ID . . . G 4 49.13 16.707 35.589 1 40.7 ? O2 3ID 695 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           11 
#