data_1FBH # _model_server_result.job_id Q6kBn-SPmdWduDnlkR6BNg _model_server_result.datetime_utc '2024-11-29 12:46:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":337}' # _entry.id 1FBH # _exptl.entry_id 1FBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FBH _cell.length_a 131.2 _cell.length_b 131.2 _cell.length_c 69.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 117 n n P1 O2P FBP sing 118 n n P1 O3P FBP sing 119 n n P1 O1 FBP sing 120 n n O2P HOP2 FBP sing 121 n n O3P HOP3 FBP sing 122 n n O1 C1 FBP sing 123 n n C1 C2 FBP sing 124 n n C1 H11 FBP sing 125 n n C1 H12 FBP sing 126 n n C2 O2 FBP sing 127 n n C2 C3 FBP sing 128 n n C2 O5 FBP sing 129 n n O2 HO2 FBP sing 130 n n C3 O3 FBP sing 131 n n C3 C4 FBP sing 132 n n C3 H3 FBP sing 133 n n O3 HO3 FBP sing 134 n n C4 O4 FBP sing 135 n n C4 C5 FBP sing 136 n n C4 H4 FBP sing 137 n n O4 HO4 FBP sing 138 n n C5 O5 FBP sing 139 n n C5 C6 FBP sing 140 n n C5 H5 FBP sing 141 n n C6 O6 FBP sing 142 n n C6 H61 FBP sing 143 n n C6 H62 FBP sing 144 n n O6 P2 FBP sing 145 n n P2 O4P FBP doub 146 n n P2 O5P FBP sing 147 n n P2 O6P FBP sing 148 n n O5P HOP5 FBP sing 149 n n O6P HOP6 FBP sing 150 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1FBH _atom_sites.fract_transf_matrix[1][1] 0.007622 _atom_sites.fract_transf_matrix[1][2] 0.004401 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008801 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AFP A 1 336 336 AFP AFP . D 3 FBP A 1 337 337 FBP FBP . E 2 AFP B 1 336 336 AFP AFP . F 3 FBP B 1 337 337 FBP FBP . G 4 HOH A 1 338 338 HOH HOH . G 4 HOH A 2 339 339 HOH HOH . G 4 HOH A 3 340 340 HOH HOH . G 4 HOH A 4 341 341 HOH HOH . G 4 HOH A 5 342 342 HOH HOH . G 4 HOH A 6 343 343 HOH HOH . G 4 HOH A 7 344 344 HOH HOH . G 4 HOH A 8 345 345 HOH HOH . G 4 HOH A 9 346 346 HOH HOH . G 4 HOH A 10 347 347 HOH HOH . G 4 HOH A 11 348 348 HOH HOH . G 4 HOH A 12 349 349 HOH HOH . G 4 HOH A 13 350 350 HOH HOH . G 4 HOH A 14 351 351 HOH HOH . G 4 HOH A 15 352 352 HOH HOH . G 4 HOH A 16 353 353 HOH HOH . G 4 HOH A 17 354 354 HOH HOH . G 4 HOH A 18 355 355 HOH HOH . G 4 HOH A 19 356 356 HOH HOH . G 4 HOH A 20 357 357 HOH HOH . G 4 HOH A 21 358 358 HOH HOH . G 4 HOH A 22 359 359 HOH HOH . G 4 HOH A 23 360 360 HOH HOH . G 4 HOH A 24 361 361 HOH HOH . G 4 HOH A 25 362 362 HOH HOH . G 4 HOH A 26 363 363 HOH HOH . G 4 HOH A 27 364 364 HOH HOH . G 4 HOH A 28 365 365 HOH HOH . G 4 HOH A 29 366 366 HOH HOH . G 4 HOH A 30 367 367 HOH HOH . G 4 HOH A 31 368 368 HOH HOH . G 4 HOH A 32 369 369 HOH HOH . G 4 HOH A 33 370 370 HOH HOH . G 4 HOH A 34 371 371 HOH HOH . G 4 HOH A 35 372 372 HOH HOH . G 4 HOH A 36 373 373 HOH HOH . G 4 HOH A 37 374 374 HOH HOH . G 4 HOH A 38 375 375 HOH HOH . G 4 HOH A 39 376 376 HOH HOH . G 4 HOH A 40 377 377 HOH HOH . G 4 HOH A 41 378 378 HOH HOH . G 4 HOH A 42 379 379 HOH HOH . G 4 HOH A 43 380 380 HOH HOH . G 4 HOH A 44 381 381 HOH HOH . G 4 HOH A 45 382 382 HOH HOH . G 4 HOH A 46 383 383 HOH HOH . G 4 HOH A 47 384 384 HOH HOH . G 4 HOH A 48 385 385 HOH HOH . G 4 HOH A 49 386 386 HOH HOH . G 4 HOH A 50 387 387 HOH HOH . G 4 HOH A 51 388 388 HOH HOH . G 4 HOH A 52 389 389 HOH HOH . G 4 HOH A 53 390 390 HOH HOH . G 4 HOH A 54 391 391 HOH HOH . G 4 HOH A 55 392 392 HOH HOH . G 4 HOH A 56 393 393 HOH HOH . H 4 HOH B 1 338 338 HOH HOH . H 4 HOH B 2 339 339 HOH HOH . H 4 HOH B 3 340 340 HOH HOH . H 4 HOH B 4 341 341 HOH HOH . H 4 HOH B 5 342 342 HOH HOH . H 4 HOH B 6 343 343 HOH HOH . H 4 HOH B 7 344 344 HOH HOH . H 4 HOH B 8 345 345 HOH HOH . H 4 HOH B 9 346 346 HOH HOH . H 4 HOH B 10 347 347 HOH HOH . H 4 HOH B 11 348 348 HOH HOH . H 4 HOH B 12 349 349 HOH HOH . H 4 HOH B 13 350 350 HOH HOH . H 4 HOH B 14 351 351 HOH HOH . H 4 HOH B 15 352 352 HOH HOH . H 4 HOH B 16 353 353 HOH HOH . H 4 HOH B 17 354 354 HOH HOH . H 4 HOH B 18 355 355 HOH HOH . H 4 HOH B 19 356 356 HOH HOH . H 4 HOH B 20 357 357 HOH HOH . H 4 HOH B 21 358 358 HOH HOH . H 4 HOH B 22 359 359 HOH HOH . H 4 HOH B 23 360 360 HOH HOH . H 4 HOH B 24 361 361 HOH HOH . H 4 HOH B 25 362 362 HOH HOH . H 4 HOH B 26 363 363 HOH HOH . H 4 HOH B 27 364 364 HOH HOH . H 4 HOH B 28 365 365 HOH HOH . H 4 HOH B 29 366 366 HOH HOH . H 4 HOH B 30 367 367 HOH HOH . H 4 HOH B 31 368 368 HOH HOH . H 4 HOH B 32 369 369 HOH HOH . H 4 HOH B 33 370 370 HOH HOH . H 4 HOH B 34 371 371 HOH HOH . H 4 HOH B 35 372 372 HOH HOH . H 4 HOH B 36 373 373 HOH HOH . H 4 HOH B 37 374 374 HOH HOH . H 4 HOH B 38 375 375 HOH HOH . H 4 HOH B 39 376 376 HOH HOH . H 4 HOH B 40 377 377 HOH HOH . H 4 HOH B 41 378 378 HOH HOH . H 4 HOH B 42 379 379 HOH HOH . H 4 HOH B 43 380 380 HOH HOH . H 4 HOH B 44 381 381 HOH HOH . H 4 HOH B 45 382 382 HOH HOH . H 4 HOH B 46 383 383 HOH HOH . H 4 HOH B 47 384 384 HOH HOH . H 4 HOH B 48 385 385 HOH HOH . H 4 HOH B 49 386 386 HOH HOH . H 4 HOH B 50 387 387 HOH HOH . H 4 HOH B 51 388 388 HOH HOH . H 4 HOH B 52 389 389 HOH HOH . H 4 HOH B 53 390 390 HOH HOH . H 4 HOH B 54 391 391 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . B . D 3 40.815 88.514 26.236 0.8 86.34 ? P1 FBP 337 A 1 HETATM 2 O O1P FBP . B . D 3 41.235 87.095 26.351 0.8 82.93 ? O1P FBP 337 A 1 HETATM 3 O O2P FBP . B . D 3 41.099 89.449 27.364 0.8 82.05 ? O2P FBP 337 A 1 HETATM 4 O O3P FBP . B . D 3 41.461 89.066 24.889 0.8 81.45 ? O3P FBP 337 A 1 HETATM 5 O O1 FBP . B . D 3 39.23 88.622 25.989 0.8 70.77 ? O1 FBP 337 A 1 HETATM 6 C C1 FBP . B . D 3 38.537 89.873 26.077 0.8 43.98 ? C1 FBP 337 A 1 HETATM 7 C C2 FBP . B . D 3 37.093 89.671 25.63 0.8 38.37 ? C2 FBP 337 A 1 HETATM 8 O O2 FBP . B . D 3 36.967 88.396 25.065 0.8 34.55 ? O2 FBP 337 A 1 HETATM 9 C C3 FBP . B . D 3 36.564 90.717 24.643 0.8 34.63 ? C3 FBP 337 A 1 HETATM 10 O O3 FBP . B . D 3 36.974 90.386 23.334 0.8 32.29 ? O3 FBP 337 A 1 HETATM 11 C C4 FBP . B . D 3 35.057 90.665 24.899 0.8 32.51 ? C4 FBP 337 A 1 HETATM 12 O O4 FBP . B . D 3 34.33 91.851 24.567 0.8 29.9 ? O4 FBP 337 A 1 HETATM 13 C C5 FBP . B . D 3 34.999 90.426 26.43 0.8 30.72 ? C5 FBP 337 A 1 HETATM 14 O O5 FBP . B . D 3 36.254 89.812 26.782 0.8 33.87 ? O5 FBP 337 A 1 HETATM 15 C C6 FBP . B . D 3 33.855 89.536 26.826 0.8 31.91 ? C6 FBP 337 A 1 HETATM 16 O O6 FBP . B . D 3 33.943 89.29 28.233 0.8 29.88 ? O6 FBP 337 A 1 HETATM 17 P P2 FBP . B . D 3 32.603 88.994 29.115 0.8 27.74 ? P2 FBP 337 A 1 HETATM 18 O O4P FBP . B . D 3 32.116 87.605 28.743 0.8 36.27 ? O4P FBP 337 A 1 HETATM 19 O O5P FBP . B . D 3 33.122 89.118 30.538 0.8 34.55 ? O5P FBP 337 A 1 HETATM 20 O O6P FBP . B . D 3 31.58 90.068 28.79 0.8 31.13 ? O6P FBP 337 A 1 HETATM 21 H HOP3 FBP . B . D 3 41.798 89.936 25.089 0.8 0 ? HOP3 FBP 337 A 1 HETATM 22 H HO2 FBP . B . D 3 36.921 87.738 25.777 0.8 0 ? HO2 FBP 337 A 1 HETATM 23 H HO3 FBP . B . D 3 37.491 91.135 22.991 0.8 0 ? HO3 FBP 337 A 1 HETATM 24 H HO4 FBP . B . D 3 33.837 92.113 25.344 0.8 0 ? HO4 FBP 337 A 1 HETATM 25 H HOP5 FBP . B . D 3 32.761 89.903 30.933 0.8 0 ? HOP5 FBP 337 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 372 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #