data_1FBY
#
_model_server_result.job_id            8nmL3_UT8HyD-NcFhOO8mw 
_model_server_result.datetime_utc      '2024-10-12 23:22:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1fby 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":500}' 
#
_entry.id    1FBY 
#
_exptl.entry_id    1FBY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              300.435 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(9cis)-retinoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1FBY 
_cell.length_a            66.325 
_cell.length_b            86.358 
_cell.length_c            90.527 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1FBY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C20 H28 O2' 
_chem_comp.formula_weight    300.435 
_chem_comp.id                9CR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(9cis)-retinoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C15 9CR doub 1 n n 
C15 C14 9CR sing 2 n n 
C15 O2 9CR sing 3 n n 
C14 C13 9CR doub 4 e n 
C13 C12 9CR sing 5 n n 
C13 C20 9CR sing 6 n n 
C12 C11 9CR doub 7 e n 
C11 C10 9CR sing 8 n n 
C18 C5 9CR sing 9 n n 
C10 C9 9CR doub 10 z n 
C9 C19 9CR sing 11 n n 
C9 C8 9CR sing 12 n n 
C8 C7 9CR doub 13 e n 
C5 C4 9CR sing 14 n n 
C5 C6 9CR doub 15 n n 
C4 C3 9CR sing 16 n n 
C7 C6 9CR sing 17 n n 
C6 C1 9CR sing 18 n n 
C3 C2 9CR sing 19 n n 
C1 C17 9CR sing 20 n n 
C1 C2 9CR sing 21 n n 
C1 C16 9CR sing 22 n n 
C2 H1 9CR sing 23 n n 
C2 H2 9CR sing 24 n n 
C3 H3 9CR sing 25 n n 
C3 H4 9CR sing 26 n n 
C4 H5 9CR sing 27 n n 
C4 H6 9CR sing 28 n n 
C7 H7 9CR sing 29 n n 
C8 H8 9CR sing 30 n n 
C10 H9 9CR sing 31 n n 
C11 H10 9CR sing 32 n n 
C12 H11 9CR sing 33 n n 
C14 H12 9CR sing 34 n n 
C16 H13 9CR sing 35 n n 
C16 H14 9CR sing 36 n n 
C16 H15 9CR sing 37 n n 
C17 H16 9CR sing 38 n n 
C17 H17 9CR sing 39 n n 
C17 H18 9CR sing 40 n n 
C18 H19 9CR sing 41 n n 
C18 H20 9CR sing 42 n n 
C18 H21 9CR sing 43 n n 
C19 H22 9CR sing 44 n n 
C19 H23 9CR sing 45 n n 
C19 H24 9CR sing 46 n n 
C20 H25 9CR sing 47 n n 
C20 H26 9CR sing 48 n n 
C20 H27 9CR sing 49 n n 
O2 H28 9CR sing 50 n n 
#
_atom_sites.entry_id                     1FBY 
_atom_sites.fract_transf_matrix[1][1]    0.015077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01158 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011046 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 9CR A 1 500 500 9CR 9CI . 
D 2 9CR B 1 1500 1500 9CR 9CI . 
E 3 HOH A 1 1601 1601 HOH WAT . 
E 3 HOH A 2 1602 1602 HOH WAT . 
E 3 HOH A 3 1603 1603 HOH WAT . 
E 3 HOH A 4 1604 1604 HOH WAT . 
E 3 HOH A 5 1605 1605 HOH WAT . 
E 3 HOH A 6 1607 1607 HOH WAT . 
E 3 HOH A 7 1608 1608 HOH WAT . 
E 3 HOH A 8 1609 1609 HOH WAT . 
E 3 HOH A 9 1610 1610 HOH WAT . 
E 3 HOH A 10 1612 1612 HOH WAT . 
E 3 HOH A 11 1613 1613 HOH WAT . 
E 3 HOH A 12 1614 1614 HOH WAT . 
E 3 HOH A 13 1615 1615 HOH WAT . 
E 3 HOH A 14 1616 1616 HOH WAT . 
E 3 HOH A 15 1617 1617 HOH WAT . 
E 3 HOH A 16 1618 1618 HOH WAT . 
E 3 HOH A 17 1619 1619 HOH WAT . 
E 3 HOH A 18 1620 1620 HOH WAT . 
E 3 HOH A 19 1621 1621 HOH WAT . 
E 3 HOH A 20 1622 1622 HOH WAT . 
E 3 HOH A 21 1623 1623 HOH WAT . 
E 3 HOH A 22 1624 1624 HOH WAT . 
E 3 HOH A 23 1625 1625 HOH WAT . 
E 3 HOH A 24 1626 1626 HOH WAT . 
E 3 HOH A 25 1627 1627 HOH WAT . 
E 3 HOH A 26 1628 1628 HOH WAT . 
E 3 HOH A 27 1629 1629 HOH WAT . 
E 3 HOH A 28 1630 1630 HOH WAT . 
E 3 HOH A 29 1631 1631 HOH WAT . 
E 3 HOH A 30 1632 1632 HOH WAT . 
E 3 HOH A 31 1633 1633 HOH WAT . 
E 3 HOH A 32 1634 1634 HOH WAT . 
E 3 HOH A 33 1635 1635 HOH WAT . 
E 3 HOH A 34 1636 1636 HOH WAT . 
E 3 HOH A 35 1637 1637 HOH WAT . 
E 3 HOH A 36 1638 1638 HOH WAT . 
E 3 HOH A 37 1639 1639 HOH WAT . 
E 3 HOH A 38 1640 1640 HOH WAT . 
E 3 HOH A 39 1641 1641 HOH WAT . 
E 3 HOH A 40 1642 1642 HOH WAT . 
E 3 HOH A 41 1643 1643 HOH WAT . 
E 3 HOH A 42 1644 1644 HOH WAT . 
E 3 HOH A 43 1645 1645 HOH WAT . 
E 3 HOH A 44 1646 1646 HOH WAT . 
E 3 HOH A 45 1647 1647 HOH WAT . 
E 3 HOH A 46 1648 1648 HOH WAT . 
E 3 HOH A 47 1649 1649 HOH WAT . 
E 3 HOH A 48 1650 1650 HOH WAT . 
E 3 HOH A 49 1651 1651 HOH WAT . 
E 3 HOH A 50 1652 1652 HOH WAT . 
E 3 HOH A 51 1653 1653 HOH WAT . 
E 3 HOH A 52 1654 1654 HOH WAT . 
E 3 HOH A 53 1655 1655 HOH WAT . 
E 3 HOH A 54 1656 1656 HOH WAT . 
E 3 HOH A 55 1657 1657 HOH WAT . 
E 3 HOH A 56 1659 1659 HOH WAT . 
E 3 HOH A 57 1660 1660 HOH WAT . 
E 3 HOH A 58 1661 1661 HOH WAT . 
E 3 HOH A 59 1662 1662 HOH WAT . 
E 3 HOH A 60 1663 1663 HOH WAT . 
E 3 HOH A 61 1664 1664 HOH WAT . 
E 3 HOH A 62 1665 1665 HOH WAT . 
E 3 HOH A 63 1666 1666 HOH WAT . 
E 3 HOH A 64 1667 1667 HOH WAT . 
E 3 HOH A 65 1668 1668 HOH WAT . 
E 3 HOH A 66 1669 1669 HOH WAT . 
E 3 HOH A 67 1670 1670 HOH WAT . 
E 3 HOH A 68 1671 1671 HOH WAT . 
E 3 HOH A 69 1672 1672 HOH WAT . 
E 3 HOH A 70 1673 1673 HOH WAT . 
E 3 HOH A 71 1674 1674 HOH WAT . 
E 3 HOH A 72 1675 1675 HOH WAT . 
E 3 HOH A 73 1676 1676 HOH WAT . 
E 3 HOH A 74 1677 1677 HOH WAT . 
E 3 HOH A 75 1678 1678 HOH WAT . 
E 3 HOH A 76 1679 1679 HOH WAT . 
E 3 HOH A 77 1680 1680 HOH WAT . 
E 3 HOH A 78 1681 1681 HOH WAT . 
E 3 HOH A 79 1682 1682 HOH WAT . 
E 3 HOH A 80 1683 1683 HOH WAT . 
E 3 HOH A 81 1684 1684 HOH WAT . 
E 3 HOH A 82 1685 1685 HOH WAT . 
E 3 HOH A 83 1686 1686 HOH WAT . 
E 3 HOH A 84 1687 1687 HOH WAT . 
E 3 HOH A 85 1688 1688 HOH WAT . 
E 3 HOH A 86 1689 1689 HOH WAT . 
E 3 HOH A 87 1690 1690 HOH WAT . 
E 3 HOH A 88 1691 1691 HOH WAT . 
E 3 HOH A 89 1692 1692 HOH WAT . 
E 3 HOH A 90 1693 1693 HOH WAT . 
E 3 HOH A 91 1694 1694 HOH WAT . 
E 3 HOH A 92 1695 1695 HOH WAT . 
E 3 HOH A 93 1696 1696 HOH WAT . 
E 3 HOH A 94 1697 1697 HOH WAT . 
E 3 HOH A 95 1698 1698 HOH WAT . 
E 3 HOH A 96 1699 1699 HOH WAT . 
E 3 HOH A 97 1700 1700 HOH WAT . 
E 3 HOH A 98 1701 1701 HOH WAT . 
E 3 HOH A 99 1702 1702 HOH WAT . 
E 3 HOH A 100 1703 1703 HOH WAT . 
E 3 HOH A 101 1704 1704 HOH WAT . 
E 3 HOH A 102 1705 1705 HOH WAT . 
E 3 HOH A 103 1706 1706 HOH WAT . 
E 3 HOH A 104 1707 1707 HOH WAT . 
E 3 HOH A 105 1708 1708 HOH WAT . 
E 3 HOH A 106 1709 1709 HOH WAT . 
E 3 HOH A 107 1710 1710 HOH WAT . 
E 3 HOH A 108 1711 1711 HOH WAT . 
E 3 HOH A 109 1712 1712 HOH WAT . 
E 3 HOH A 110 1713 1713 HOH WAT . 
E 3 HOH A 111 1714 1714 HOH WAT . 
E 3 HOH A 112 1715 1715 HOH WAT . 
E 3 HOH A 113 1716 1716 HOH WAT . 
E 3 HOH A 114 1717 1717 HOH WAT . 
E 3 HOH A 115 1718 1718 HOH WAT . 
E 3 HOH A 116 1720 1720 HOH WAT . 
E 3 HOH A 117 1721 1721 HOH WAT . 
E 3 HOH A 118 1722 1722 HOH WAT . 
E 3 HOH A 119 1723 1723 HOH WAT . 
E 3 HOH A 120 1724 1724 HOH WAT . 
E 3 HOH A 121 1725 1725 HOH WAT . 
E 3 HOH A 122 1726 1726 HOH WAT . 
E 3 HOH A 123 1727 1727 HOH WAT . 
E 3 HOH A 124 1824 1824 HOH WAT . 
E 3 HOH A 125 1869 1869 HOH WAT . 
F 3 HOH B 1 1611 1611 HOH WAT . 
F 3 HOH B 2 1658 1658 HOH WAT . 
F 3 HOH B 3 1719 1719 HOH WAT . 
F 3 HOH B 4 1801 1801 HOH WAT . 
F 3 HOH B 5 1802 1802 HOH WAT . 
F 3 HOH B 6 1803 1803 HOH WAT . 
F 3 HOH B 7 1804 1804 HOH WAT . 
F 3 HOH B 8 1805 1805 HOH WAT . 
F 3 HOH B 9 1806 1806 HOH WAT . 
F 3 HOH B 10 1807 1807 HOH WAT . 
F 3 HOH B 11 1808 1808 HOH WAT . 
F 3 HOH B 12 1809 1809 HOH WAT . 
F 3 HOH B 13 1810 1810 HOH WAT . 
F 3 HOH B 14 1811 1811 HOH WAT . 
F 3 HOH B 15 1812 1812 HOH WAT . 
F 3 HOH B 16 1813 1813 HOH WAT . 
F 3 HOH B 17 1814 1814 HOH WAT . 
F 3 HOH B 18 1815 1815 HOH WAT . 
F 3 HOH B 19 1816 1816 HOH WAT . 
F 3 HOH B 20 1817 1817 HOH WAT . 
F 3 HOH B 21 1818 1818 HOH WAT . 
F 3 HOH B 22 1819 1819 HOH WAT . 
F 3 HOH B 23 1820 1820 HOH WAT . 
F 3 HOH B 24 1821 1821 HOH WAT . 
F 3 HOH B 25 1822 1822 HOH WAT . 
F 3 HOH B 26 1823 1823 HOH WAT . 
F 3 HOH B 27 1825 1825 HOH WAT . 
F 3 HOH B 28 1826 1826 HOH WAT . 
F 3 HOH B 29 1827 1827 HOH WAT . 
F 3 HOH B 30 1828 1828 HOH WAT . 
F 3 HOH B 31 1829 1829 HOH WAT . 
F 3 HOH B 32 1830 1830 HOH WAT . 
F 3 HOH B 33 1831 1831 HOH WAT . 
F 3 HOH B 34 1832 1832 HOH WAT . 
F 3 HOH B 35 1833 1833 HOH WAT . 
F 3 HOH B 36 1834 1834 HOH WAT . 
F 3 HOH B 37 1835 1835 HOH WAT . 
F 3 HOH B 38 1836 1836 HOH WAT . 
F 3 HOH B 39 1837 1837 HOH WAT . 
F 3 HOH B 40 1838 1838 HOH WAT . 
F 3 HOH B 41 1839 1839 HOH WAT . 
F 3 HOH B 42 1840 1840 HOH WAT . 
F 3 HOH B 43 1841 1841 HOH WAT . 
F 3 HOH B 44 1842 1842 HOH WAT . 
F 3 HOH B 45 1843 1843 HOH WAT . 
F 3 HOH B 46 1844 1844 HOH WAT . 
F 3 HOH B 47 1845 1845 HOH WAT . 
F 3 HOH B 48 1846 1846 HOH WAT . 
F 3 HOH B 49 1847 1847 HOH WAT . 
F 3 HOH B 50 1848 1848 HOH WAT . 
F 3 HOH B 51 1849 1849 HOH WAT . 
F 3 HOH B 52 1850 1850 HOH WAT . 
F 3 HOH B 53 1851 1851 HOH WAT . 
F 3 HOH B 54 1852 1852 HOH WAT . 
F 3 HOH B 55 1853 1853 HOH WAT . 
F 3 HOH B 56 1854 1854 HOH WAT . 
F 3 HOH B 57 1855 1855 HOH WAT . 
F 3 HOH B 58 1856 1856 HOH WAT . 
F 3 HOH B 59 1857 1857 HOH WAT . 
F 3 HOH B 60 1858 1858 HOH WAT . 
F 3 HOH B 61 1859 1859 HOH WAT . 
F 3 HOH B 62 1860 1860 HOH WAT . 
F 3 HOH B 63 1861 1861 HOH WAT . 
F 3 HOH B 64 1862 1862 HOH WAT . 
F 3 HOH B 65 1863 1863 HOH WAT . 
F 3 HOH B 66 1864 1864 HOH WAT . 
F 3 HOH B 67 1865 1865 HOH WAT . 
F 3 HOH B 68 1866 1866 HOH WAT . 
F 3 HOH B 69 1867 1867 HOH WAT . 
F 3 HOH B 70 1868 1868 HOH WAT . 
F 3 HOH B 71 1870 1870 HOH WAT . 
F 3 HOH B 72 1871 1871 HOH WAT . 
F 3 HOH B 73 1872 1872 HOH WAT . 
F 3 HOH B 74 1873 1873 HOH WAT . 
F 3 HOH B 75 1874 1874 HOH WAT . 
F 3 HOH B 76 1876 1876 HOH WAT . 
F 3 HOH B 77 1877 1877 HOH WAT . 
F 3 HOH B 78 1878 1878 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9CR . . . C 2 14.213 30.479 50.805 1 47.12 ? C1 9CR 500 A 1 
HETATM 2 C C2 9CR . . . C 2 14.713 29.925 52.198 1 48.25 ? C2 9CR 500 A 1 
HETATM 3 C C3 9CR . . . C 2 13.957 28.754 52.825 1 44.1 ? C3 9CR 500 A 1 
HETATM 4 C C4 9CR . . . C 2 13.828 27.597 51.87 1 44.95 ? C4 9CR 500 A 1 
HETATM 5 C C5 9CR . . . C 2 13.594 27.931 50.372 1 47.04 ? C5 9CR 500 A 1 
HETATM 6 C C6 9CR . . . C 2 13.815 29.235 49.846 1 45.64 ? C6 9CR 500 A 1 
HETATM 7 C C7 9CR . . . C 2 13.641 29.593 48.398 1 46.95 ? C7 9CR 500 A 1 
HETATM 8 C C8 9CR . . . C 2 14.405 29.204 47.356 1 43.72 ? C8 9CR 500 A 1 
HETATM 9 C C9 9CR . . . C 2 14.398 29.47 45.969 1 41.91 ? C9 9CR 500 A 1 
HETATM 10 C C10 9CR . . . C 2 15.306 28.834 45.186 1 42.7 ? C10 9CR 500 A 1 
HETATM 11 C C11 9CR . . . C 2 16.406 27.911 45.516 1 41.99 ? C11 9CR 500 A 1 
HETATM 12 C C12 9CR . . . C 2 17.148 27.268 44.595 1 40.11 ? C12 9CR 500 A 1 
HETATM 13 C C13 9CR . . . C 2 18.28 26.322 44.917 1 35.96 ? C13 9CR 500 A 1 
HETATM 14 C C14 9CR . . . C 2 18.76 25.665 43.874 1 34.92 ? C14 9CR 500 A 1 
HETATM 15 C C15 9CR . . . C 2 19.734 24.558 43.655 1 35.77 ? C15 9CR 500 A 1 
HETATM 16 C C16 9CR . . . C 2 15.39 31.39 50.312 1 48.48 ? C16 9CR 500 A 1 
HETATM 17 C C17 9CR . . . C 2 13.017 31.398 51.051 1 43.93 ? C17 9CR 500 A 1 
HETATM 18 C C18 9CR . . . C 2 13.178 26.627 49.704 1 48.16 ? C18 9CR 500 A 1 
HETATM 19 C C19 9CR . . . C 2 13.373 30.415 45.391 1 41.86 ? C19 9CR 500 A 1 
HETATM 20 C C20 9CR . . . C 2 18.756 26.107 46.348 1 40.34 ? C20 9CR 500 A 1 
HETATM 21 O O1 9CR . . . C 2 19.404 23.755 42.704 1 29.8 ? O1 9CR 500 A 1 
HETATM 22 O O2 9CR . . . C 2 20.623 24.217 44.564 1 26.85 ? O2 9CR 500 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           22 
#