data_1FCD
#
_model_server_result.job_id            YUUeW7WU4cFzycnD3tpDXQ 
_model_server_result.datetime_utc      '2025-03-04 07:47:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1fcd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":901}' 
#
_entry.id    1FCD 
#
_exptl.entry_id    1FCD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME C' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107 
_cell.angle_gamma         90 
_cell.entry_id            1FCD 
_cell.length_a            168.6 
_cell.length_b            84.6 
_cell.length_c            106.4 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1FCD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G 1 1 
C,D,H,I,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 I N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 161 A CYS 161 1_555 A SG CYS 337 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf2 C SG CYS 161 B CYS 161 1_555 C SG CYS 337 B CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? 
covale ? covale1 A SG CYS 42 A CYS 42 1_555 E C8M FAD . A FAD 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? 
covale ? covale2 B SG CYS 11 C CYS 11 1_555 F CAB HEC . C HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
covale ? covale3 B SG CYS 14 C CYS 14 1_555 F CAC HEC . C HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.778 ? 
covale ? covale4 B SG CYS 101 C CYS 101 1_555 G CAB HEC . C HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale5 B SG CYS 104 C CYS 104 1_555 G CAC HEC . C HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? 
covale ? covale6 C SG CYS 42 B CYS 42 1_555 H C8M FAD . B FAD 699 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? 
covale ? covale7 D SG CYS 11 D CYS 11 1_555 I CAB HEC . D HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? 
covale ? covale8 D SG CYS 14 D CYS 14 1_555 I CAC HEC . D HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? 
covale ? covale9 D SG CYS 101 D CYS 101 1_555 J CAB HEC . D HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? 
covale ? covale10 D SG CYS 104 D CYS 104 1_555 J CAC HEC . D HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? 
metalc ? metalc1 B NE2 HIS 15 C HIS 15 1_555 F FE HEC . C HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc2 B SD MET 54 C MET 54 1_555 F FE HEC . C HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc3 B NE2 HIS 105 C HIS 105 1_555 G FE HEC . C HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc4 B SD MET 147 C MET 147 1_555 G FE HEC . C HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc5 D NE2 HIS 15 D HIS 15 1_555 I FE HEC . D HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
metalc ? metalc6 D SD MET 54 D MET 54 1_555 I FE HEC . D HEC 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc7 D NE2 HIS 105 D HIS 105 1_555 J FE HEC . D HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? 
metalc ? metalc8 D SD MET 147 D MET 147 1_555 J FE HEC . D HEC 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEC sing 220 n n 
FE NB HEC sing 221 n n 
FE NC HEC sing 222 n n 
FE ND HEC sing 223 n n 
CHA C1A HEC doub 224 n n 
CHA C4D HEC sing 225 n n 
CHA HHA HEC sing 226 n n 
CHB C4A HEC doub 227 n n 
CHB C1B HEC sing 228 n n 
CHB HHB HEC sing 229 n n 
CHC C4B HEC doub 230 n n 
CHC C1C HEC sing 231 n n 
CHC HHC HEC sing 232 n n 
CHD C4C HEC doub 233 n n 
CHD C1D HEC sing 234 n n 
CHD HHD HEC sing 235 n n 
NA C1A HEC sing 236 n y 
NA C4A HEC sing 237 n y 
C1A C2A HEC sing 238 n y 
C2A C3A HEC doub 239 n y 
C2A CAA HEC sing 240 n n 
C3A C4A HEC sing 241 n y 
C3A CMA HEC sing 242 n n 
CMA HMA1 HEC sing 243 n n 
CMA HMA2 HEC sing 244 n n 
CMA HMA3 HEC sing 245 n n 
CAA CBA HEC sing 246 n n 
CAA HAA1 HEC sing 247 n n 
CAA HAA2 HEC sing 248 n n 
CBA CGA HEC sing 249 n n 
CBA HBA1 HEC sing 250 n n 
CBA HBA2 HEC sing 251 n n 
CGA O1A HEC doub 252 n n 
CGA O2A HEC sing 253 n n 
O2A H2A HEC sing 254 n n 
NB C1B HEC sing 255 n y 
NB C4B HEC sing 256 n y 
C1B C2B HEC doub 257 n y 
C2B C3B HEC sing 258 n y 
C2B CMB HEC sing 259 n n 
C3B C4B HEC sing 260 n y 
C3B CAB HEC doub 261 e n 
CMB HMB1 HEC sing 262 n n 
CMB HMB2 HEC sing 263 n n 
CMB HMB3 HEC sing 264 n n 
CAB CBB HEC sing 265 n n 
CAB HAB HEC sing 266 n n 
CBB HBB1 HEC sing 267 n n 
CBB HBB2 HEC sing 268 n n 
CBB HBB3 HEC sing 269 n n 
NC C1C HEC sing 270 n y 
NC C4C HEC sing 271 n y 
C1C C2C HEC doub 272 n y 
C2C C3C HEC sing 273 n y 
C2C CMC HEC sing 274 n n 
C3C C4C HEC sing 275 n y 
C3C CAC HEC doub 276 e n 
CMC HMC1 HEC sing 277 n n 
CMC HMC2 HEC sing 278 n n 
CMC HMC3 HEC sing 279 n n 
CAC CBC HEC sing 280 n n 
CAC HAC HEC sing 281 n n 
CBC HBC1 HEC sing 282 n n 
CBC HBC2 HEC sing 283 n n 
CBC HBC3 HEC sing 284 n n 
ND C1D HEC sing 285 n y 
ND C4D HEC sing 286 n y 
C1D C2D HEC doub 287 n y 
C2D C3D HEC sing 288 n y 
C2D CMD HEC sing 289 n n 
C3D C4D HEC doub 290 n y 
C3D CAD HEC sing 291 n n 
CMD HMD1 HEC sing 292 n n 
CMD HMD2 HEC sing 293 n n 
CMD HMD3 HEC sing 294 n n 
CAD CBD HEC sing 295 n n 
CAD HAD1 HEC sing 296 n n 
CAD HAD2 HEC sing 297 n n 
CBD CGD HEC sing 298 n n 
CBD HBD1 HEC sing 299 n n 
CBD HBD2 HEC sing 300 n n 
CGD O1D HEC doub 301 n n 
CGD O2D HEC sing 302 n n 
O2D H2D HEC sing 303 n n 
#
_atom_sites.entry_id                     1FCD 
_atom_sites.fract_transf_matrix[1][1]    0.005931 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001813 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01182 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009828 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 FAD A 1 699 699 FAD FAD . 
F 4 HEC C 1 901 901 HEC HEM . 
G 4 HEC C 1 902 902 HEC HEM . 
H 3 FAD B 1 699 699 FAD FAD . 
I 4 HEC D 1 901 901 HEC HEM . 
J 4 HEC D 1 902 902 HEC HEM . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEC . . . F 4 12.757 -1.916 32.895 1 21.56 ? FE HEC 901 C 1 
HETATM 2 C CHA HEC . . . F 4 11.635 -4.685 34.464 1 37.53 ? CHA HEC 901 C 1 
HETATM 3 C CHB HEC . . . F 4 11.632 -0.025 35.498 1 34.52 ? CHB HEC 901 C 1 
HETATM 4 C CHC HEC . . . F 4 13.781 0.897 31.333 1 36.21 ? CHC HEC 901 C 1 
HETATM 5 C CHD HEC . . . F 4 13.565 -3.717 30.217 1 35.08 ? CHD HEC 901 C 1 
HETATM 6 N NA HEC . . . F 4 11.796 -2.286 34.598 1 36.77 ? NA HEC 901 C 1 
HETATM 7 C C1A HEC . . . F 4 11.438 -3.5 35.113 1 35.64 ? C1A HEC 901 C 1 
HETATM 8 C C2A HEC . . . F 4 10.997 -3.383 36.479 1 36.39 ? C2A HEC 901 C 1 
HETATM 9 C C3A HEC . . . F 4 11.071 -2.08 36.818 1 36.89 ? C3A HEC 901 C 1 
HETATM 10 C C4A HEC . . . F 4 11.496 -1.393 35.613 1 35.65 ? C4A HEC 901 C 1 
HETATM 11 C CMA HEC . . . F 4 10.842 -1.46 38.194 1 34.93 ? CMA HEC 901 C 1 
HETATM 12 C CAA HEC . . . F 4 10.511 -4.523 37.343 1 35.59 ? CAA HEC 901 C 1 
HETATM 13 C CBA HEC . . . F 4 9.016 -4.701 37.245 1 33.8 ? CBA HEC 901 C 1 
HETATM 14 C CGA HEC . . . F 4 8.483 -5.913 37.983 1 35.43 ? CGA HEC 901 C 1 
HETATM 15 O O1A HEC . . . F 4 9.122 -6.333 38.942 1 35.62 ? O1A HEC 901 C 1 
HETATM 16 O O2A HEC . . . F 4 7.426 -6.444 37.608 1 37.84 ? O2A HEC 901 C 1 
HETATM 17 N NB HEC . . . F 4 12.731 0.01 33.318 1 31.28 ? NB HEC 901 C 1 
HETATM 18 C C1B HEC . . . F 4 12.184 0.63 34.423 1 35.62 ? C1B HEC 901 C 1 
HETATM 19 C C2B HEC . . . F 4 12.295 2.072 34.337 1 37.04 ? C2B HEC 901 C 1 
HETATM 20 C C3B HEC . . . F 4 12.914 2.347 33.169 1 30.74 ? C3B HEC 901 C 1 
HETATM 21 C C4B HEC . . . F 4 13.205 1.051 32.566 1 33.22 ? C4B HEC 901 C 1 
HETATM 22 C CMB HEC . . . F 4 11.775 3.065 35.361 1 39.45 ? CMB HEC 901 C 1 
HETATM 23 C CAB HEC . . . F 4 13.098 3.7 32.528 1 26.34 ? CAB HEC 901 C 1 
HETATM 24 C CBB HEC . . . F 4 14.224 4.541 33.089 1 22.53 ? CBB HEC 901 C 1 
HETATM 25 N NC HEC . . . F 4 13.558 -1.492 31.158 1 34.11 ? NC HEC 901 C 1 
HETATM 26 C C1C HEC . . . F 4 13.952 -0.285 30.667 1 33.98 ? C1C HEC 901 C 1 
HETATM 27 C C2C HEC . . . F 4 14.518 -0.401 29.342 1 35.42 ? C2C HEC 901 C 1 
HETATM 28 C C3C HEC . . . F 4 14.426 -1.71 29.031 1 33.68 ? C3C HEC 901 C 1 
HETATM 29 C C4C HEC . . . F 4 13.838 -2.368 30.162 1 32.86 ? C4C HEC 901 C 1 
HETATM 30 C CMC HEC . . . F 4 15.045 0.738 28.479 1 37.02 ? CMC HEC 901 C 1 
HETATM 31 C CAC HEC . . . F 4 14.668 -2.389 27.708 1 29.51 ? CAC HEC 901 C 1 
HETATM 32 C CBC HEC . . . F 4 16.062 -2.245 27.141 1 28.29 ? CBC HEC 901 C 1 
HETATM 33 N ND HEC . . . F 4 12.616 -3.794 32.447 1 31.84 ? ND HEC 901 C 1 
HETATM 34 C C1D HEC . . . F 4 13.032 -4.384 31.29 1 34.53 ? C1D HEC 901 C 1 
HETATM 35 C C2D HEC . . . F 4 12.979 -5.801 31.386 1 32.4 ? C2D HEC 901 C 1 
HETATM 36 C C3D HEC . . . F 4 12.542 -6.118 32.629 1 31.51 ? C3D HEC 901 C 1 
HETATM 37 C C4D HEC . . . F 4 12.216 -4.835 33.232 1 33.92 ? C4D HEC 901 C 1 
HETATM 38 C CMD HEC . . . F 4 13.392 -6.707 30.277 1 31.99 ? CMD HEC 901 C 1 
HETATM 39 C CAD HEC . . . F 4 12.693 -7.434 33.377 1 27.35 ? CAD HEC 901 C 1 
HETATM 40 C CBD HEC . . . F 4 13.949 -7.465 34.268 1 25 ? CBD HEC 901 C 1 
HETATM 41 C CGD HEC . . . F 4 15.278 -7.936 33.649 1 26.2 ? CGD HEC 901 C 1 
HETATM 42 O O1D HEC . . . F 4 15.467 -9.133 33.461 1 25.36 ? O1D HEC 901 C 1 
HETATM 43 O O2D HEC . . . F 4 16.186 -7.135 33.383 1 21.5 ? O2D HEC 901 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#