data_1FDT # _model_server_result.job_id 6ObjfelKJMSwhQgJzAcWbA _model_server_result.datetime_utc '2024-11-04 22:18:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":350}' # _entry.id 1FDT # _exptl.entry_id 1FDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 272.382 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ESTRADIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.47 _cell.angle_gamma 90 _cell.entry_id 1FDT _cell.length_a 122.77 _cell.length_b 43.79 _cell.length_c 60.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 112.810929 0 59.70509 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CZ ARG 37 A ARG 37 1_555 D C6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.886 ? covale ? covale2 A NH2 ARG 37 A ARG 37 1_555 D C6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.617 ? covale ? covale3 A NE ARG 37 A ARG 37 1_555 D N6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.662 ? # _chem_comp.formula 'C18 H24 O2' _chem_comp.formula_weight 272.382 _chem_comp.id EST _chem_comp.mon_nstd_flag . _chem_comp.name ESTRADIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EST doub 83 n y C1 C10 EST sing 84 n y C1 H1 EST sing 85 n n C2 C3 EST sing 86 n y C2 H2 EST sing 87 n n C3 O3 EST sing 88 n n C3 C4 EST doub 89 n y O3 HO3 EST sing 90 n n C4 C5 EST sing 91 n y C4 H4 EST sing 92 n n C5 C6 EST sing 93 n n C5 C10 EST doub 94 n y C6 C7 EST sing 95 n n C6 H61 EST sing 96 n n C6 H62 EST sing 97 n n C7 C8 EST sing 98 n n C7 H71 EST sing 99 n n C7 H72 EST sing 100 n n C8 C9 EST sing 101 n n C8 C14 EST sing 102 n n C8 H8 EST sing 103 n n C9 C10 EST sing 104 n n C9 C11 EST sing 105 n n C9 H9 EST sing 106 n n C11 C12 EST sing 107 n n C11 H111 EST sing 108 n n C11 H112 EST sing 109 n n C12 C13 EST sing 110 n n C12 H121 EST sing 111 n n C12 H122 EST sing 112 n n C13 C14 EST sing 113 n n C13 C17 EST sing 114 n n C13 C18 EST sing 115 n n C14 C15 EST sing 116 n n C14 H14 EST sing 117 n n C15 C16 EST sing 118 n n C15 H151 EST sing 119 n n C15 H152 EST sing 120 n n C16 C17 EST sing 121 n n C16 H161 EST sing 122 n n C16 H162 EST sing 123 n n C17 O17 EST sing 124 n n C17 H17 EST sing 125 n n O17 HO7 EST sing 126 n n C18 H181 EST sing 127 n n C18 H182 EST sing 128 n n C18 H183 EST sing 129 n n # _atom_sites.entry_id 1FDT _atom_sites.fract_transf_matrix[1][1] 0.008145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001359 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022836 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 380 380 SO4 SO4 . C 3 EST A 1 350 350 EST EST . D 4 NAP A 1 360 360 NAP NAP . E 5 HOH A 1 390 390 HOH HOH . E 5 HOH A 2 391 391 HOH HOH . E 5 HOH A 3 401 401 HOH HOH . E 5 HOH A 4 402 402 HOH HOH . E 5 HOH A 5 403 403 HOH HOH . E 5 HOH A 6 404 404 HOH HOH . E 5 HOH A 7 405 405 HOH HOH . E 5 HOH A 8 406 406 HOH HOH . E 5 HOH A 9 407 407 HOH HOH . E 5 HOH A 10 408 408 HOH HOH . E 5 HOH A 11 409 409 HOH HOH . E 5 HOH A 12 410 410 HOH HOH . E 5 HOH A 13 411 411 HOH HOH . E 5 HOH A 14 412 412 HOH HOH . E 5 HOH A 15 413 413 HOH HOH . E 5 HOH A 16 414 414 HOH HOH . E 5 HOH A 17 415 415 HOH HOH . E 5 HOH A 18 416 416 HOH HOH . E 5 HOH A 19 417 417 HOH HOH . E 5 HOH A 20 418 418 HOH HOH . E 5 HOH A 21 419 419 HOH HOH . E 5 HOH A 22 420 420 HOH HOH . E 5 HOH A 23 421 421 HOH HOH . E 5 HOH A 24 422 422 HOH HOH . E 5 HOH A 25 423 423 HOH HOH . E 5 HOH A 26 424 424 HOH HOH . E 5 HOH A 27 425 425 HOH HOH . E 5 HOH A 28 426 426 HOH HOH . E 5 HOH A 29 427 427 HOH HOH . E 5 HOH A 30 428 428 HOH HOH . E 5 HOH A 31 429 429 HOH HOH . E 5 HOH A 32 430 430 HOH HOH . E 5 HOH A 33 431 431 HOH HOH . E 5 HOH A 34 432 432 HOH HOH . E 5 HOH A 35 433 433 HOH HOH . E 5 HOH A 36 434 434 HOH HOH . E 5 HOH A 37 435 435 HOH HOH . E 5 HOH A 38 436 436 HOH HOH . E 5 HOH A 39 437 437 HOH HOH . E 5 HOH A 40 438 438 HOH HOH . E 5 HOH A 41 439 439 HOH HOH . E 5 HOH A 42 440 440 HOH HOH . E 5 HOH A 43 441 441 HOH HOH . E 5 HOH A 44 442 442 HOH HOH . E 5 HOH A 45 443 443 HOH HOH . E 5 HOH A 46 444 444 HOH HOH . E 5 HOH A 47 445 445 HOH HOH . E 5 HOH A 48 446 446 HOH HOH . E 5 HOH A 49 447 447 HOH HOH . E 5 HOH A 50 448 448 HOH HOH . E 5 HOH A 51 449 449 HOH HOH . E 5 HOH A 52 450 450 HOH HOH . E 5 HOH A 53 451 451 HOH HOH . E 5 HOH A 54 452 452 HOH HOH . E 5 HOH A 55 453 453 HOH HOH . E 5 HOH A 56 454 454 HOH HOH . E 5 HOH A 57 455 455 HOH HOH . E 5 HOH A 58 456 456 HOH HOH . E 5 HOH A 59 457 457 HOH HOH . E 5 HOH A 60 458 458 HOH HOH . E 5 HOH A 61 459 459 HOH HOH . E 5 HOH A 62 460 460 HOH HOH . E 5 HOH A 63 461 461 HOH HOH . E 5 HOH A 64 462 462 HOH HOH . E 5 HOH A 65 463 463 HOH HOH . E 5 HOH A 66 464 464 HOH HOH . E 5 HOH A 67 465 465 HOH HOH . E 5 HOH A 68 466 466 HOH HOH . E 5 HOH A 69 467 467 HOH HOH . E 5 HOH A 70 468 468 HOH HOH . E 5 HOH A 71 469 469 HOH HOH . E 5 HOH A 72 470 470 HOH HOH . E 5 HOH A 73 471 471 HOH HOH . E 5 HOH A 74 472 472 HOH HOH . E 5 HOH A 75 473 473 HOH HOH . E 5 HOH A 76 474 474 HOH HOH . E 5 HOH A 77 475 475 HOH HOH . E 5 HOH A 78 476 476 HOH HOH . E 5 HOH A 79 477 477 HOH HOH . E 5 HOH A 80 478 478 HOH HOH . E 5 HOH A 81 479 479 HOH HOH . E 5 HOH A 82 480 480 HOH HOH . E 5 HOH A 83 481 481 HOH HOH . E 5 HOH A 84 482 482 HOH HOH . E 5 HOH A 85 483 483 HOH HOH . E 5 HOH A 86 484 484 HOH HOH . E 5 HOH A 87 485 485 HOH HOH . E 5 HOH A 88 486 486 HOH HOH . E 5 HOH A 89 487 487 HOH HOH . E 5 HOH A 90 488 488 HOH HOH . E 5 HOH A 91 489 489 HOH HOH . E 5 HOH A 92 490 490 HOH HOH . E 5 HOH A 93 491 491 HOH HOH . E 5 HOH A 94 492 492 HOH HOH . E 5 HOH A 95 493 493 HOH HOH . E 5 HOH A 96 494 494 HOH HOH . E 5 HOH A 97 495 495 HOH HOH . E 5 HOH A 98 496 496 HOH HOH . E 5 HOH A 99 497 497 HOH HOH . E 5 HOH A 100 498 498 HOH HOH . E 5 HOH A 101 499 499 HOH HOH . E 5 HOH A 102 500 500 HOH HOH . E 5 HOH A 103 501 501 HOH HOH . E 5 HOH A 104 502 502 HOH HOH . E 5 HOH A 105 503 503 HOH HOH . E 5 HOH A 106 504 504 HOH HOH . E 5 HOH A 107 505 505 HOH HOH . E 5 HOH A 108 506 506 HOH HOH . E 5 HOH A 109 507 507 HOH HOH . E 5 HOH A 110 508 508 HOH HOH . E 5 HOH A 111 509 509 HOH HOH . E 5 HOH A 112 510 510 HOH HOH . E 5 HOH A 113 511 511 HOH HOH . E 5 HOH A 114 512 512 HOH HOH . E 5 HOH A 115 513 513 HOH HOH . E 5 HOH A 116 514 514 HOH HOH . E 5 HOH A 117 515 515 HOH HOH . E 5 HOH A 118 516 516 HOH HOH . E 5 HOH A 119 517 517 HOH HOH . E 5 HOH A 120 518 518 HOH HOH . E 5 HOH A 121 519 519 HOH HOH . E 5 HOH A 122 520 520 HOH HOH . E 5 HOH A 123 521 521 HOH HOH . E 5 HOH A 124 522 522 HOH HOH . E 5 HOH A 125 523 523 HOH HOH . E 5 HOH A 126 524 524 HOH HOH . E 5 HOH A 127 525 525 HOH HOH . E 5 HOH A 128 526 526 HOH HOH . E 5 HOH A 129 527 527 HOH HOH . E 5 HOH A 130 528 528 HOH HOH . E 5 HOH A 131 529 529 HOH HOH . E 5 HOH A 132 530 530 HOH HOH . E 5 HOH A 133 531 531 HOH HOH . E 5 HOH A 134 532 532 HOH HOH . E 5 HOH A 135 533 533 HOH HOH . E 5 HOH A 136 534 534 HOH HOH . E 5 HOH A 137 535 535 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EST . . . C 3 46.529 8.834 41.432 1 47.1 ? C1 EST 350 A 1 HETATM 2 C C2 EST . . . C 3 47.189 9.703 42.287 1 46.83 ? C2 EST 350 A 1 HETATM 3 C C3 EST . . . C 3 47.417 9.322 43.597 1 46.67 ? C3 EST 350 A 1 HETATM 4 O O3 EST . . . C 3 48.039 10.199 44.449 1 46.13 ? O3 EST 350 A 1 HETATM 5 C C4 EST . . . C 3 46.997 8.079 44.062 1 46.72 ? C4 EST 350 A 1 HETATM 6 C C5 EST . . . C 3 46.32 7.191 43.217 1 47.06 ? C5 EST 350 A 1 HETATM 7 C C6 EST . . . C 3 45.782 5.89 43.781 1 47.05 ? C6 EST 350 A 1 HETATM 8 C C7 EST . . . C 3 44.837 5.152 42.858 1 47.77 ? C7 EST 350 A 1 HETATM 9 C C8 EST . . . C 3 45.288 5.234 41.403 1 48.52 ? C8 EST 350 A 1 HETATM 10 C C9 EST . . . C 3 45.282 6.69 40.931 1 48.03 ? C9 EST 350 A 1 HETATM 11 C C10 EST . . . C 3 46.077 7.58 41.873 1 47.75 ? C10 EST 350 A 1 HETATM 12 C C11 EST . . . C 3 45.713 6.78 39.462 1 48.38 ? C11 EST 350 A 1 HETATM 13 C C12 EST . . . C 3 44.916 5.869 38.515 1 48.8 ? C12 EST 350 A 1 HETATM 14 C C13 EST . . . C 3 44.885 4.417 39.013 1 49.14 ? C13 EST 350 A 1 HETATM 15 C C14 EST . . . C 3 44.381 4.405 40.478 1 49.01 ? C14 EST 350 A 1 HETATM 16 C C15 EST . . . C 3 44.104 2.939 40.741 1 49.55 ? C15 EST 350 A 1 HETATM 17 C C16 EST . . . C 3 43.423 2.451 39.439 1 49.92 ? C16 EST 350 A 1 HETATM 18 C C17 EST . . . C 3 43.795 3.531 38.36 1 49.81 ? C17 EST 350 A 1 HETATM 19 O O17 EST . . . C 3 44.084 2.93 37.08 1 49.92 ? O17 EST 350 A 1 HETATM 20 C C18 EST . . . C 3 46.251 3.72 38.828 1 49.11 ? C18 EST 350 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #