data_1FDT # _model_server_result.job_id CVZzZ1xOTF6t8UHsgtCcOQ _model_server_result.datetime_utc '2024-11-26 20:58:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":380}' # _entry.id 1FDT # _exptl.entry_id 1FDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.47 _cell.angle_gamma 90 _cell.entry_id 1FDT _cell.length_a 122.77 _cell.length_b 43.79 _cell.length_c 60.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 112.810929 0 59.70509 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CZ ARG 37 A ARG 37 1_555 D C6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.886 ? covale ? covale2 A NH2 ARG 37 A ARG 37 1_555 D C6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.617 ? covale ? covale3 A NE ARG 37 A ARG 37 1_555 D N6A NAP . A NAP 360 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.662 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 417 n n S O2 SO4 doub 418 n n S O3 SO4 sing 419 n n S O4 SO4 sing 420 n n # _atom_sites.entry_id 1FDT _atom_sites.fract_transf_matrix[1][1] 0.008145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001359 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022836 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 380 380 SO4 SO4 . C 3 EST A 1 350 350 EST EST . D 4 NAP A 1 360 360 NAP NAP . E 5 HOH A 1 390 390 HOH HOH . E 5 HOH A 2 391 391 HOH HOH . E 5 HOH A 3 401 401 HOH HOH . E 5 HOH A 4 402 402 HOH HOH . E 5 HOH A 5 403 403 HOH HOH . E 5 HOH A 6 404 404 HOH HOH . E 5 HOH A 7 405 405 HOH HOH . E 5 HOH A 8 406 406 HOH HOH . E 5 HOH A 9 407 407 HOH HOH . E 5 HOH A 10 408 408 HOH HOH . E 5 HOH A 11 409 409 HOH HOH . E 5 HOH A 12 410 410 HOH HOH . E 5 HOH A 13 411 411 HOH HOH . E 5 HOH A 14 412 412 HOH HOH . E 5 HOH A 15 413 413 HOH HOH . E 5 HOH A 16 414 414 HOH HOH . E 5 HOH A 17 415 415 HOH HOH . E 5 HOH A 18 416 416 HOH HOH . E 5 HOH A 19 417 417 HOH HOH . E 5 HOH A 20 418 418 HOH HOH . E 5 HOH A 21 419 419 HOH HOH . E 5 HOH A 22 420 420 HOH HOH . E 5 HOH A 23 421 421 HOH HOH . E 5 HOH A 24 422 422 HOH HOH . E 5 HOH A 25 423 423 HOH HOH . E 5 HOH A 26 424 424 HOH HOH . E 5 HOH A 27 425 425 HOH HOH . E 5 HOH A 28 426 426 HOH HOH . E 5 HOH A 29 427 427 HOH HOH . E 5 HOH A 30 428 428 HOH HOH . E 5 HOH A 31 429 429 HOH HOH . E 5 HOH A 32 430 430 HOH HOH . E 5 HOH A 33 431 431 HOH HOH . E 5 HOH A 34 432 432 HOH HOH . E 5 HOH A 35 433 433 HOH HOH . E 5 HOH A 36 434 434 HOH HOH . E 5 HOH A 37 435 435 HOH HOH . E 5 HOH A 38 436 436 HOH HOH . E 5 HOH A 39 437 437 HOH HOH . E 5 HOH A 40 438 438 HOH HOH . E 5 HOH A 41 439 439 HOH HOH . E 5 HOH A 42 440 440 HOH HOH . E 5 HOH A 43 441 441 HOH HOH . E 5 HOH A 44 442 442 HOH HOH . E 5 HOH A 45 443 443 HOH HOH . E 5 HOH A 46 444 444 HOH HOH . E 5 HOH A 47 445 445 HOH HOH . E 5 HOH A 48 446 446 HOH HOH . E 5 HOH A 49 447 447 HOH HOH . E 5 HOH A 50 448 448 HOH HOH . E 5 HOH A 51 449 449 HOH HOH . E 5 HOH A 52 450 450 HOH HOH . E 5 HOH A 53 451 451 HOH HOH . E 5 HOH A 54 452 452 HOH HOH . E 5 HOH A 55 453 453 HOH HOH . E 5 HOH A 56 454 454 HOH HOH . E 5 HOH A 57 455 455 HOH HOH . E 5 HOH A 58 456 456 HOH HOH . E 5 HOH A 59 457 457 HOH HOH . E 5 HOH A 60 458 458 HOH HOH . E 5 HOH A 61 459 459 HOH HOH . E 5 HOH A 62 460 460 HOH HOH . E 5 HOH A 63 461 461 HOH HOH . E 5 HOH A 64 462 462 HOH HOH . E 5 HOH A 65 463 463 HOH HOH . E 5 HOH A 66 464 464 HOH HOH . E 5 HOH A 67 465 465 HOH HOH . E 5 HOH A 68 466 466 HOH HOH . E 5 HOH A 69 467 467 HOH HOH . E 5 HOH A 70 468 468 HOH HOH . E 5 HOH A 71 469 469 HOH HOH . E 5 HOH A 72 470 470 HOH HOH . E 5 HOH A 73 471 471 HOH HOH . E 5 HOH A 74 472 472 HOH HOH . E 5 HOH A 75 473 473 HOH HOH . E 5 HOH A 76 474 474 HOH HOH . E 5 HOH A 77 475 475 HOH HOH . E 5 HOH A 78 476 476 HOH HOH . E 5 HOH A 79 477 477 HOH HOH . E 5 HOH A 80 478 478 HOH HOH . E 5 HOH A 81 479 479 HOH HOH . E 5 HOH A 82 480 480 HOH HOH . E 5 HOH A 83 481 481 HOH HOH . E 5 HOH A 84 482 482 HOH HOH . E 5 HOH A 85 483 483 HOH HOH . E 5 HOH A 86 484 484 HOH HOH . E 5 HOH A 87 485 485 HOH HOH . E 5 HOH A 88 486 486 HOH HOH . E 5 HOH A 89 487 487 HOH HOH . E 5 HOH A 90 488 488 HOH HOH . E 5 HOH A 91 489 489 HOH HOH . E 5 HOH A 92 490 490 HOH HOH . E 5 HOH A 93 491 491 HOH HOH . E 5 HOH A 94 492 492 HOH HOH . E 5 HOH A 95 493 493 HOH HOH . E 5 HOH A 96 494 494 HOH HOH . E 5 HOH A 97 495 495 HOH HOH . E 5 HOH A 98 496 496 HOH HOH . E 5 HOH A 99 497 497 HOH HOH . E 5 HOH A 100 498 498 HOH HOH . E 5 HOH A 101 499 499 HOH HOH . E 5 HOH A 102 500 500 HOH HOH . E 5 HOH A 103 501 501 HOH HOH . E 5 HOH A 104 502 502 HOH HOH . E 5 HOH A 105 503 503 HOH HOH . E 5 HOH A 106 504 504 HOH HOH . E 5 HOH A 107 505 505 HOH HOH . E 5 HOH A 108 506 506 HOH HOH . E 5 HOH A 109 507 507 HOH HOH . E 5 HOH A 110 508 508 HOH HOH . E 5 HOH A 111 509 509 HOH HOH . E 5 HOH A 112 510 510 HOH HOH . E 5 HOH A 113 511 511 HOH HOH . E 5 HOH A 114 512 512 HOH HOH . E 5 HOH A 115 513 513 HOH HOH . E 5 HOH A 116 514 514 HOH HOH . E 5 HOH A 117 515 515 HOH HOH . E 5 HOH A 118 516 516 HOH HOH . E 5 HOH A 119 517 517 HOH HOH . E 5 HOH A 120 518 518 HOH HOH . E 5 HOH A 121 519 519 HOH HOH . E 5 HOH A 122 520 520 HOH HOH . E 5 HOH A 123 521 521 HOH HOH . E 5 HOH A 124 522 522 HOH HOH . E 5 HOH A 125 523 523 HOH HOH . E 5 HOH A 126 524 524 HOH HOH . E 5 HOH A 127 525 525 HOH HOH . E 5 HOH A 128 526 526 HOH HOH . E 5 HOH A 129 527 527 HOH HOH . E 5 HOH A 130 528 528 HOH HOH . E 5 HOH A 131 529 529 HOH HOH . E 5 HOH A 132 530 530 HOH HOH . E 5 HOH A 133 531 531 HOH HOH . E 5 HOH A 134 532 532 HOH HOH . E 5 HOH A 135 533 533 HOH HOH . E 5 HOH A 136 534 534 HOH HOH . E 5 HOH A 137 535 535 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 54.565 7.992 29.912 1 40.74 ? S SO4 380 A 1 HETATM 2 O O1 SO4 . . . B 2 55.315 9.173 30.349 1 39.92 ? O1 SO4 380 A 1 HETATM 3 O O2 SO4 . . . B 2 53.706 7.795 30.917 1 39.71 ? O2 SO4 380 A 1 HETATM 4 O O3 SO4 . . . B 2 53.569 8.325 28.716 1 39.91 ? O3 SO4 380 A 1 HETATM 5 O O4 SO4 . . . B 2 55.082 6.705 30.151 1 38.98 ? O4 SO4 380 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #