data_1FE4 # _model_server_result.job_id xO66FAGFKNCntNoct_YRlA _model_server_result.datetime_utc '2024-11-22 19:20:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fe4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1003}' # _entry.id 1FE4 # _exptl.entry_id 1FE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.028 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'URANYL (VI) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FE4 _cell.length_a 79.95 _cell.length_b 79.95 _cell.length_c 55.61 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC D 1 SUC 2 n C FRU 2 C 2 FRU D 1 SUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C1 GLC . C GLC 1 1_555 C O2 FRU . C FRU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 sing metalc ? metalc1 A SG CYS 12 A CYS 12 1_555 F HG HG . A HG 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A SG CYS 15 A CYS 15 1_555 F HG HG . A HG 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc3 F HG HG . A HG 1007 1_555 B SG CYS 12 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc4 F HG HG . A HG 1007 1_555 B SG CYS 15 B CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? # _chem_comp.formula 'O2 U 2' _chem_comp.formula_weight 270.028 _chem_comp.id IUM _chem_comp.mon_nstd_flag . _chem_comp.name 'URANYL (VI) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag U O1 IUM sing 202 n n U O2 IUM sing 203 n n # _atom_sites.entry_id 1FE4 _atom_sites.fract_transf_matrix[1][1] 0.012508 _atom_sites.fract_transf_matrix[1][2] 0.007221 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017982 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 IUM A 1 1003 3 IUM IUM . E 4 SO4 A 1 1005 5 SO4 SO4 . F 5 HG A 1 1007 7 HG HG . G 4 SO4 B 1 1004 4 SO4 SO4 . H 6 HOH A 1 1008 6 HOH TIP . H 6 HOH A 2 1009 9 HOH TIP . H 6 HOH A 3 1010 12 HOH TIP . H 6 HOH A 4 1011 13 HOH TIP . H 6 HOH A 5 1012 16 HOH TIP . H 6 HOH A 6 1013 19 HOH TIP . H 6 HOH A 7 1014 20 HOH TIP . H 6 HOH A 8 1015 24 HOH TIP . H 6 HOH A 9 1016 25 HOH TIP . H 6 HOH A 10 1017 26 HOH TIP . H 6 HOH A 11 1018 27 HOH TIP . H 6 HOH A 12 1019 28 HOH TIP . H 6 HOH A 13 1020 29 HOH TIP . H 6 HOH A 14 1021 30 HOH TIP . H 6 HOH A 15 1022 35 HOH TIP . H 6 HOH A 16 1023 41 HOH TIP . H 6 HOH A 17 1024 43 HOH TIP . H 6 HOH A 18 1025 44 HOH TIP . H 6 HOH A 19 1026 45 HOH TIP . H 6 HOH A 20 1027 48 HOH TIP . H 6 HOH A 21 1028 52 HOH TIP . H 6 HOH A 22 1029 53 HOH TIP . H 6 HOH A 23 1030 54 HOH TIP . H 6 HOH A 24 1031 55 HOH TIP . H 6 HOH A 25 1032 57 HOH TIP . H 6 HOH A 26 1033 58 HOH TIP . H 6 HOH A 27 1034 59 HOH TIP . H 6 HOH A 28 1035 60 HOH TIP . H 6 HOH A 29 1036 64 HOH TIP . H 6 HOH A 30 1037 65 HOH TIP . H 6 HOH A 31 1038 67 HOH TIP . H 6 HOH A 32 1039 68 HOH TIP . H 6 HOH A 33 1040 72 HOH TIP . H 6 HOH A 34 1041 74 HOH TIP . H 6 HOH A 35 1042 75 HOH TIP . H 6 HOH A 36 1043 77 HOH TIP . H 6 HOH A 37 1044 78 HOH TIP . H 6 HOH A 38 1045 81 HOH TIP . H 6 HOH A 39 1046 82 HOH TIP . H 6 HOH A 40 1047 85 HOH TIP . H 6 HOH A 41 1048 90 HOH TIP . H 6 HOH A 42 1049 91 HOH TIP . H 6 HOH A 43 1050 93 HOH TIP . H 6 HOH A 44 1051 96 HOH TIP . H 6 HOH A 45 1052 97 HOH TIP . H 6 HOH A 46 1053 103 HOH TIP . H 6 HOH A 47 1054 108 HOH TIP . H 6 HOH A 48 1055 112 HOH TIP . H 6 HOH A 49 1056 113 HOH TIP . H 6 HOH A 50 1057 114 HOH TIP . H 6 HOH A 51 1058 115 HOH TIP . H 6 HOH A 52 1059 116 HOH TIP . H 6 HOH A 53 1060 118 HOH TIP . H 6 HOH A 54 1061 119 HOH TIP . H 6 HOH A 55 1062 121 HOH TIP . H 6 HOH A 56 1063 122 HOH TIP . I 6 HOH B 1 1005 1 HOH TIP . I 6 HOH B 2 1006 2 HOH TIP . I 6 HOH B 3 1007 3 HOH TIP . I 6 HOH B 4 1008 4 HOH TIP . I 6 HOH B 5 1009 5 HOH TIP . I 6 HOH B 6 1010 7 HOH TIP . I 6 HOH B 7 1011 8 HOH TIP . I 6 HOH B 8 1012 10 HOH TIP . I 6 HOH B 9 1013 11 HOH TIP . I 6 HOH B 10 1014 14 HOH TIP . I 6 HOH B 11 1015 15 HOH TIP . I 6 HOH B 12 1016 17 HOH TIP . I 6 HOH B 13 1017 18 HOH TIP . I 6 HOH B 14 1018 21 HOH TIP . I 6 HOH B 15 1019 22 HOH TIP . I 6 HOH B 16 1020 23 HOH TIP . I 6 HOH B 17 1021 31 HOH TIP . I 6 HOH B 18 1022 32 HOH TIP . I 6 HOH B 19 1023 33 HOH TIP . I 6 HOH B 20 1024 34 HOH TIP . I 6 HOH B 21 1025 36 HOH TIP . I 6 HOH B 22 1026 37 HOH TIP . I 6 HOH B 23 1027 38 HOH TIP . I 6 HOH B 24 1028 39 HOH TIP . I 6 HOH B 25 1029 40 HOH TIP . I 6 HOH B 26 1030 42 HOH TIP . I 6 HOH B 27 1031 46 HOH TIP . I 6 HOH B 28 1032 47 HOH TIP . I 6 HOH B 29 1033 49 HOH TIP . I 6 HOH B 30 1034 50 HOH TIP . I 6 HOH B 31 1035 51 HOH TIP . I 6 HOH B 32 1036 56 HOH TIP . I 6 HOH B 33 1037 61 HOH TIP . I 6 HOH B 34 1038 62 HOH TIP . I 6 HOH B 35 1039 63 HOH TIP . I 6 HOH B 36 1040 66 HOH TIP . I 6 HOH B 37 1041 69 HOH TIP . I 6 HOH B 38 1042 70 HOH TIP . I 6 HOH B 39 1043 71 HOH TIP . I 6 HOH B 40 1044 73 HOH TIP . I 6 HOH B 41 1045 76 HOH TIP . I 6 HOH B 42 1046 79 HOH TIP . I 6 HOH B 43 1047 80 HOH TIP . I 6 HOH B 44 1048 83 HOH TIP . I 6 HOH B 45 1049 84 HOH TIP . I 6 HOH B 46 1050 86 HOH TIP . I 6 HOH B 47 1051 87 HOH TIP . I 6 HOH B 48 1052 88 HOH TIP . I 6 HOH B 49 1053 89 HOH TIP . I 6 HOH B 50 1054 92 HOH TIP . I 6 HOH B 51 1055 94 HOH TIP . I 6 HOH B 52 1056 95 HOH TIP . I 6 HOH B 53 1057 98 HOH TIP . I 6 HOH B 54 1058 99 HOH TIP . I 6 HOH B 55 1059 100 HOH TIP . I 6 HOH B 56 1060 101 HOH TIP . I 6 HOH B 57 1061 102 HOH TIP . I 6 HOH B 58 1062 104 HOH TIP . I 6 HOH B 59 1063 105 HOH TIP . I 6 HOH B 60 1064 106 HOH TIP . I 6 HOH B 61 1065 107 HOH TIP . I 6 HOH B 62 1066 109 HOH TIP . I 6 HOH B 63 1067 110 HOH TIP . I 6 HOH B 64 1068 111 HOH TIP . I 6 HOH B 65 1069 117 HOH TIP . I 6 HOH B 66 1070 120 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 U U IUM . . . D 3 11.869 6.121 44.851 0.65 20.65 ? U IUM 1003 A 1 HETATM 2 O O1 IUM . . . D 3 10.608 5.117 44.268 0.65 20.04 ? O1 IUM 1003 A 1 HETATM 3 O O2 IUM . . . D 3 13.136 7.132 45.436 0.65 20.06 ? O2 IUM 1003 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #