data_1FEE # _model_server_result.job_id VFcgOHNXRDJpS92HezDDAQ _model_server_result.datetime_utc '2024-12-02 19:54:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":173}' # _entry.id 1FEE # _exptl.entry_id 1FEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (I) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1FEE _cell.length_a 78.232 _cell.length_b 78.232 _cell.length_c 54.664 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC E 1 SUC 2 n C FRU 2 C 2 FRU E 1 SUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C1 GLC . C GLC 1 1_555 C O2 FRU . C FRU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 sing metalc ? metalc1 A SG CYS 12 A CYS 12 1_555 D CU CU1 . A CU1 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A SG CYS 15 A CYS 15 1_555 D CU CU1 . A CU1 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc3 D CU CU1 . A CU1 173 1_555 B SG CYS 12 B CYS 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc4 D CU CU1 . A CU1 173 1_555 B SG CYS 15 B CYS 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? # _chem_comp.formula 'Cu 1' _chem_comp.formula_weight 63.546 _chem_comp.id CU1 _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (I) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1FEE _atom_sites.fract_transf_matrix[1][1] 0.012782 _atom_sites.fract_transf_matrix[1][2] 0.00738 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 CU1 A 1 173 2 CU1 CU1 . E 4 SO4 A 1 174 3 SO4 SO4 . F 4 SO4 B 1 175 5 SO4 SO4 . G 5 HOH A 1 175 9 HOH TIP . G 5 HOH A 2 176 10 HOH TIP . G 5 HOH A 3 177 12 HOH TIP . G 5 HOH A 4 178 14 HOH TIP . G 5 HOH A 5 179 15 HOH TIP . G 5 HOH A 6 180 17 HOH TIP . G 5 HOH A 7 181 21 HOH TIP . G 5 HOH A 8 182 22 HOH TIP . G 5 HOH A 9 183 28 HOH TIP . G 5 HOH A 10 184 32 HOH TIP . G 5 HOH A 11 185 33 HOH TIP . G 5 HOH A 12 186 34 HOH TIP . G 5 HOH A 13 187 35 HOH TIP . G 5 HOH A 14 188 36 HOH TIP . G 5 HOH A 15 189 37 HOH TIP . G 5 HOH A 16 190 39 HOH TIP . G 5 HOH A 17 191 41 HOH TIP . G 5 HOH A 18 192 42 HOH TIP . G 5 HOH A 19 193 43 HOH TIP . G 5 HOH A 20 194 45 HOH TIP . G 5 HOH A 21 195 46 HOH TIP . G 5 HOH A 22 196 48 HOH TIP . G 5 HOH A 23 197 49 HOH TIP . G 5 HOH A 24 198 50 HOH TIP . G 5 HOH A 25 199 57 HOH TIP . G 5 HOH A 26 200 58 HOH TIP . G 5 HOH A 27 201 60 HOH TIP . G 5 HOH A 28 202 62 HOH TIP . G 5 HOH A 29 203 63 HOH TIP . G 5 HOH A 30 204 65 HOH TIP . G 5 HOH A 31 205 66 HOH TIP . G 5 HOH A 32 206 67 HOH TIP . G 5 HOH A 33 207 71 HOH TIP . G 5 HOH A 34 208 72 HOH TIP . G 5 HOH A 35 209 73 HOH TIP . G 5 HOH A 36 210 81 HOH TIP . G 5 HOH A 37 211 87 HOH TIP . G 5 HOH A 38 212 88 HOH TIP . G 5 HOH A 39 213 89 HOH TIP . G 5 HOH A 40 214 95 HOH TIP . G 5 HOH A 41 215 97 HOH TIP . G 5 HOH A 42 216 98 HOH TIP . G 5 HOH A 43 217 99 HOH TIP . G 5 HOH A 44 218 103 HOH TIP . G 5 HOH A 45 219 105 HOH TIP . G 5 HOH A 46 220 106 HOH TIP . G 5 HOH A 47 221 109 HOH TIP . G 5 HOH A 48 222 113 HOH TIP . G 5 HOH A 49 223 116 HOH TIP . G 5 HOH A 50 224 117 HOH TIP . G 5 HOH A 51 225 118 HOH TIP . G 5 HOH A 52 226 119 HOH TIP . G 5 HOH A 53 227 121 HOH TIP . G 5 HOH A 54 228 122 HOH TIP . G 5 HOH A 55 229 123 HOH TIP . G 5 HOH A 56 230 124 HOH TIP . G 5 HOH A 57 231 125 HOH TIP . G 5 HOH A 58 232 127 HOH TIP . G 5 HOH A 59 233 130 HOH TIP . G 5 HOH A 60 234 134 HOH TIP . G 5 HOH A 61 235 137 HOH TIP . G 5 HOH A 62 236 138 HOH TIP . G 5 HOH A 63 237 139 HOH TIP . G 5 HOH A 64 238 141 HOH TIP . G 5 HOH A 65 239 142 HOH TIP . G 5 HOH A 66 240 143 HOH TIP . G 5 HOH A 67 241 144 HOH TIP . G 5 HOH A 68 242 146 HOH TIP . G 5 HOH A 69 243 150 HOH TIP . G 5 HOH A 70 244 151 HOH TIP . G 5 HOH A 71 245 153 HOH TIP . G 5 HOH A 72 246 154 HOH TIP . G 5 HOH A 73 247 156 HOH TIP . G 5 HOH A 74 248 157 HOH TIP . G 5 HOH A 75 249 159 HOH TIP . G 5 HOH A 76 250 163 HOH TIP . G 5 HOH A 77 251 164 HOH TIP . G 5 HOH A 78 252 165 HOH TIP . G 5 HOH A 79 253 166 HOH TIP . G 5 HOH A 80 254 171 HOH TIP . H 5 HOH B 1 176 1 HOH TIP . H 5 HOH B 2 177 2 HOH TIP . H 5 HOH B 3 178 3 HOH TIP . H 5 HOH B 4 179 4 HOH TIP . H 5 HOH B 5 180 5 HOH TIP . H 5 HOH B 6 181 6 HOH TIP . H 5 HOH B 7 182 7 HOH TIP . H 5 HOH B 8 183 8 HOH TIP . H 5 HOH B 9 184 11 HOH TIP . H 5 HOH B 10 185 13 HOH TIP . H 5 HOH B 11 186 16 HOH TIP . H 5 HOH B 12 187 18 HOH TIP . H 5 HOH B 13 188 19 HOH TIP . H 5 HOH B 14 189 20 HOH TIP . H 5 HOH B 15 190 23 HOH TIP . H 5 HOH B 16 191 24 HOH TIP . H 5 HOH B 17 192 25 HOH TIP . H 5 HOH B 18 193 26 HOH TIP . H 5 HOH B 19 194 27 HOH TIP . H 5 HOH B 20 195 29 HOH TIP . H 5 HOH B 21 196 30 HOH TIP . H 5 HOH B 22 197 31 HOH TIP . H 5 HOH B 23 198 38 HOH TIP . H 5 HOH B 24 199 40 HOH TIP . H 5 HOH B 25 200 44 HOH TIP . H 5 HOH B 26 201 47 HOH TIP . H 5 HOH B 27 202 51 HOH TIP . H 5 HOH B 28 203 52 HOH TIP . H 5 HOH B 29 204 53 HOH TIP . H 5 HOH B 30 205 54 HOH TIP . H 5 HOH B 31 206 55 HOH TIP . H 5 HOH B 32 207 56 HOH TIP . H 5 HOH B 33 208 59 HOH TIP . H 5 HOH B 34 209 61 HOH TIP . H 5 HOH B 35 210 64 HOH TIP . H 5 HOH B 36 211 68 HOH TIP . H 5 HOH B 37 212 69 HOH TIP . H 5 HOH B 38 213 70 HOH TIP . H 5 HOH B 39 214 74 HOH TIP . H 5 HOH B 40 215 75 HOH TIP . H 5 HOH B 41 216 76 HOH TIP . H 5 HOH B 42 217 77 HOH TIP . H 5 HOH B 43 218 78 HOH TIP . H 5 HOH B 44 219 79 HOH TIP . H 5 HOH B 45 220 80 HOH TIP . H 5 HOH B 46 221 82 HOH TIP . H 5 HOH B 47 222 83 HOH TIP . H 5 HOH B 48 223 84 HOH TIP . H 5 HOH B 49 224 85 HOH TIP . H 5 HOH B 50 225 86 HOH TIP . H 5 HOH B 51 226 90 HOH TIP . H 5 HOH B 52 227 91 HOH TIP . H 5 HOH B 53 228 92 HOH TIP . H 5 HOH B 54 229 93 HOH TIP . H 5 HOH B 55 230 94 HOH TIP . H 5 HOH B 56 231 96 HOH TIP . H 5 HOH B 57 232 100 HOH TIP . H 5 HOH B 58 233 101 HOH TIP . H 5 HOH B 59 234 102 HOH TIP . H 5 HOH B 60 235 104 HOH TIP . H 5 HOH B 61 236 107 HOH TIP . H 5 HOH B 62 237 108 HOH TIP . H 5 HOH B 63 238 110 HOH TIP . H 5 HOH B 64 239 111 HOH TIP . H 5 HOH B 65 240 112 HOH TIP . H 5 HOH B 66 241 114 HOH TIP . H 5 HOH B 67 242 115 HOH TIP . H 5 HOH B 68 243 120 HOH TIP . H 5 HOH B 69 244 126 HOH TIP . H 5 HOH B 70 245 128 HOH TIP . H 5 HOH B 71 246 129 HOH TIP . H 5 HOH B 72 247 131 HOH TIP . H 5 HOH B 73 248 132 HOH TIP . H 5 HOH B 74 249 133 HOH TIP . H 5 HOH B 75 250 135 HOH TIP . H 5 HOH B 76 251 136 HOH TIP . H 5 HOH B 77 252 140 HOH TIP . H 5 HOH B 78 253 145 HOH TIP . H 5 HOH B 79 254 147 HOH TIP . H 5 HOH B 80 255 148 HOH TIP . H 5 HOH B 81 256 149 HOH TIP . H 5 HOH B 82 257 152 HOH TIP . H 5 HOH B 83 258 155 HOH TIP . H 5 HOH B 84 259 158 HOH TIP . H 5 HOH B 85 260 160 HOH TIP . H 5 HOH B 86 261 161 HOH TIP . H 5 HOH B 87 262 162 HOH TIP . H 5 HOH B 88 263 167 HOH TIP . H 5 HOH B 89 264 168 HOH TIP . H 5 HOH B 90 265 169 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU1 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 65.412 _atom_site.Cartn_y -55.019 _atom_site.Cartn_z 38.966 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 19.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU1 _atom_site.auth_seq_id 173 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #