data_1FFS # _model_server_result.job_id fuBM2RV1CPwLXA_22dfUww _model_server_result.datetime_utc '2024-10-11 12:25:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ffs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 1FFS # _exptl.entry_id 1FFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FFS _cell.length_a 159.3 _cell.length_b 53.4 _cell.length_c 77.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 12 A ASP 13 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc2 A OD2 ASP 56 A ASP 57 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc3 A O ASN 58 A ASN 59 1_555 E MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc4 C OD1 ASP 12 C ASP 13 1_555 F MN MN . C MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc5 C OD2 ASP 56 C ASP 57 1_555 F MN MN . C MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc6 C O ASN 58 C ASN 59 1_555 F MN MN . C MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc7 F MN MN . C MN 302 1_555 I O HOH . C HOH 352 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc8 F MN MN . C MN 302 1_555 I O HOH . C HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc9 F MN MN . C MN 302 1_555 I O HOH . C HOH 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1FFS _atom_sites.fract_transf_matrix[1][1] 0.006277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MN A 1 301 1 MN MN . F 3 MN C 1 302 2 MN MN . G 4 HOH A 1 302 3 HOH HOH . G 4 HOH A 2 303 5 HOH HOH . G 4 HOH A 3 304 6 HOH HOH . G 4 HOH A 4 305 11 HOH HOH . G 4 HOH A 5 306 15 HOH HOH . G 4 HOH A 6 307 20 HOH HOH . G 4 HOH A 7 308 23 HOH HOH . G 4 HOH A 8 309 27 HOH HOH . G 4 HOH A 9 310 28 HOH HOH . G 4 HOH A 10 311 34 HOH HOH . G 4 HOH A 11 312 35 HOH HOH . G 4 HOH A 12 313 37 HOH HOH . G 4 HOH A 13 314 38 HOH HOH . G 4 HOH A 14 315 41 HOH HOH . G 4 HOH A 15 316 42 HOH HOH . G 4 HOH A 16 317 45 HOH HOH . G 4 HOH A 17 318 47 HOH HOH . G 4 HOH A 18 319 50 HOH HOH . G 4 HOH A 19 320 51 HOH HOH . G 4 HOH A 20 321 53 HOH HOH . G 4 HOH A 21 322 54 HOH HOH . G 4 HOH A 22 323 55 HOH HOH . G 4 HOH A 23 324 59 HOH HOH . G 4 HOH A 24 325 66 HOH HOH . G 4 HOH A 25 326 74 HOH HOH . G 4 HOH A 26 327 77 HOH HOH . G 4 HOH A 27 328 78 HOH HOH . G 4 HOH A 28 329 84 HOH HOH . G 4 HOH A 29 330 86 HOH HOH . G 4 HOH A 30 331 89 HOH HOH . G 4 HOH A 31 332 90 HOH HOH . G 4 HOH A 32 333 91 HOH HOH . G 4 HOH A 33 334 93 HOH HOH . G 4 HOH A 34 335 101 HOH HOH . G 4 HOH A 35 336 102 HOH HOH . G 4 HOH A 36 337 104 HOH HOH . G 4 HOH A 37 338 108 HOH HOH . G 4 HOH A 38 339 109 HOH HOH . G 4 HOH A 39 340 115 HOH HOH . G 4 HOH A 40 341 116 HOH HOH . G 4 HOH A 41 342 120 HOH HOH . G 4 HOH A 42 343 121 HOH HOH . G 4 HOH A 43 344 122 HOH HOH . G 4 HOH A 44 345 124 HOH HOH . G 4 HOH A 45 346 125 HOH HOH . G 4 HOH A 46 347 126 HOH HOH . G 4 HOH A 47 348 129 HOH HOH . G 4 HOH A 48 349 131 HOH HOH . G 4 HOH A 49 350 132 HOH HOH . G 4 HOH A 50 351 134 HOH HOH . G 4 HOH A 51 352 137 HOH HOH . G 4 HOH A 52 353 139 HOH HOH . G 4 HOH A 53 354 141 HOH HOH . G 4 HOH A 54 355 146 HOH HOH . G 4 HOH A 55 356 152 HOH HOH . G 4 HOH A 56 357 155 HOH HOH . G 4 HOH A 57 358 157 HOH HOH . G 4 HOH A 58 359 160 HOH HOH . G 4 HOH A 59 360 161 HOH HOH . G 4 HOH A 60 361 164 HOH HOH . G 4 HOH A 61 362 167 HOH HOH . G 4 HOH A 62 363 168 HOH HOH . G 4 HOH A 63 364 170 HOH HOH . G 4 HOH A 64 365 174 HOH HOH . G 4 HOH A 65 366 176 HOH HOH . G 4 HOH A 66 367 177 HOH HOH . G 4 HOH A 67 368 184 HOH HOH . G 4 HOH A 68 369 189 HOH HOH . G 4 HOH A 69 370 191 HOH HOH . G 4 HOH A 70 371 193 HOH HOH . G 4 HOH A 71 372 195 HOH HOH . G 4 HOH A 72 373 197 HOH HOH . G 4 HOH A 73 374 200 HOH HOH . G 4 HOH A 74 375 202 HOH HOH . G 4 HOH A 75 376 210 HOH HOH . G 4 HOH A 76 377 211 HOH HOH . G 4 HOH A 77 378 212 HOH HOH . G 4 HOH A 78 379 213 HOH HOH . G 4 HOH A 79 380 216 HOH HOH . G 4 HOH A 80 381 226 HOH HOH . G 4 HOH A 81 382 227 HOH HOH . G 4 HOH A 82 383 229 HOH HOH . G 4 HOH A 83 384 233 HOH HOH . G 4 HOH A 84 385 235 HOH HOH . G 4 HOH A 85 386 238 HOH HOH . G 4 HOH A 86 387 240 HOH HOH . G 4 HOH A 87 388 241 HOH HOH . H 4 HOH B 1 258 10 HOH HOH . H 4 HOH B 2 259 13 HOH HOH . H 4 HOH B 3 260 17 HOH HOH . H 4 HOH B 4 261 31 HOH HOH . H 4 HOH B 5 262 56 HOH HOH . H 4 HOH B 6 263 65 HOH HOH . H 4 HOH B 7 264 67 HOH HOH . H 4 HOH B 8 265 73 HOH HOH . H 4 HOH B 9 266 80 HOH HOH . H 4 HOH B 10 267 82 HOH HOH . H 4 HOH B 11 268 95 HOH HOH . H 4 HOH B 12 269 103 HOH HOH . H 4 HOH B 13 270 105 HOH HOH . H 4 HOH B 14 271 112 HOH HOH . H 4 HOH B 15 272 117 HOH HOH . H 4 HOH B 16 273 133 HOH HOH . H 4 HOH B 17 274 148 HOH HOH . H 4 HOH B 18 275 149 HOH HOH . H 4 HOH B 19 276 150 HOH HOH . H 4 HOH B 20 277 153 HOH HOH . H 4 HOH B 21 278 162 HOH HOH . H 4 HOH B 22 279 169 HOH HOH . H 4 HOH B 23 280 175 HOH HOH . H 4 HOH B 24 281 180 HOH HOH . H 4 HOH B 25 282 181 HOH HOH . H 4 HOH B 26 283 186 HOH HOH . H 4 HOH B 27 284 187 HOH HOH . H 4 HOH B 28 285 196 HOH HOH . H 4 HOH B 29 286 203 HOH HOH . H 4 HOH B 30 287 205 HOH HOH . H 4 HOH B 31 288 206 HOH HOH . H 4 HOH B 32 289 214 HOH HOH . H 4 HOH B 33 290 218 HOH HOH . H 4 HOH B 34 291 219 HOH HOH . H 4 HOH B 35 292 224 HOH HOH . H 4 HOH B 36 293 232 HOH HOH . I 4 HOH C 1 303 4 HOH HOH . I 4 HOH C 2 304 7 HOH HOH . I 4 HOH C 3 305 8 HOH HOH . I 4 HOH C 4 306 9 HOH HOH . I 4 HOH C 5 307 12 HOH HOH . I 4 HOH C 6 308 14 HOH HOH . I 4 HOH C 7 309 16 HOH HOH . I 4 HOH C 8 310 18 HOH HOH . I 4 HOH C 9 311 19 HOH HOH . I 4 HOH C 10 312 22 HOH HOH . I 4 HOH C 11 313 24 HOH HOH . I 4 HOH C 12 314 25 HOH HOH . I 4 HOH C 13 315 29 HOH HOH . I 4 HOH C 14 316 30 HOH HOH . I 4 HOH C 15 317 32 HOH HOH . I 4 HOH C 16 318 36 HOH HOH . I 4 HOH C 17 319 39 HOH HOH . I 4 HOH C 18 320 40 HOH HOH . I 4 HOH C 19 321 43 HOH HOH . I 4 HOH C 20 322 48 HOH HOH . I 4 HOH C 21 323 52 HOH HOH . I 4 HOH C 22 324 58 HOH HOH . I 4 HOH C 23 325 60 HOH HOH . I 4 HOH C 24 326 61 HOH HOH . I 4 HOH C 25 327 62 HOH HOH . I 4 HOH C 26 328 64 HOH HOH . I 4 HOH C 27 329 68 HOH HOH . I 4 HOH C 28 330 69 HOH HOH . I 4 HOH C 29 331 70 HOH HOH . I 4 HOH C 30 332 71 HOH HOH . I 4 HOH C 31 333 72 HOH HOH . I 4 HOH C 32 334 75 HOH HOH . I 4 HOH C 33 335 76 HOH HOH . I 4 HOH C 34 336 79 HOH HOH . I 4 HOH C 35 337 81 HOH HOH . I 4 HOH C 36 338 85 HOH HOH . I 4 HOH C 37 339 87 HOH HOH . I 4 HOH C 38 340 88 HOH HOH . I 4 HOH C 39 341 94 HOH HOH . I 4 HOH C 40 342 96 HOH HOH . I 4 HOH C 41 343 98 HOH HOH . I 4 HOH C 42 344 99 HOH HOH . I 4 HOH C 43 345 100 HOH HOH . I 4 HOH C 44 346 106 HOH HOH . I 4 HOH C 45 347 110 HOH HOH . I 4 HOH C 46 348 111 HOH HOH . I 4 HOH C 47 349 113 HOH HOH . I 4 HOH C 48 350 118 HOH HOH . I 4 HOH C 49 351 119 HOH HOH . I 4 HOH C 50 352 127 HOH HOH . I 4 HOH C 51 353 128 HOH HOH . I 4 HOH C 52 354 130 HOH HOH . I 4 HOH C 53 355 135 HOH HOH . I 4 HOH C 54 356 136 HOH HOH . I 4 HOH C 55 357 138 HOH HOH . I 4 HOH C 56 358 142 HOH HOH . I 4 HOH C 57 359 143 HOH HOH . I 4 HOH C 58 360 144 HOH HOH . I 4 HOH C 59 361 147 HOH HOH . I 4 HOH C 60 362 151 HOH HOH . I 4 HOH C 61 363 154 HOH HOH . I 4 HOH C 62 364 158 HOH HOH . I 4 HOH C 63 365 159 HOH HOH . I 4 HOH C 64 366 163 HOH HOH . I 4 HOH C 65 367 165 HOH HOH . I 4 HOH C 66 368 166 HOH HOH . I 4 HOH C 67 369 171 HOH HOH . I 4 HOH C 68 370 173 HOH HOH . I 4 HOH C 69 371 179 HOH HOH . I 4 HOH C 70 372 182 HOH HOH . I 4 HOH C 71 373 183 HOH HOH . I 4 HOH C 72 374 185 HOH HOH . I 4 HOH C 73 375 188 HOH HOH . I 4 HOH C 74 376 192 HOH HOH . I 4 HOH C 75 377 194 HOH HOH . I 4 HOH C 76 378 198 HOH HOH . I 4 HOH C 77 379 199 HOH HOH . I 4 HOH C 78 380 207 HOH HOH . I 4 HOH C 79 381 215 HOH HOH . I 4 HOH C 80 382 220 HOH HOH . I 4 HOH C 81 383 221 HOH HOH . I 4 HOH C 82 384 222 HOH HOH . I 4 HOH C 83 385 223 HOH HOH . I 4 HOH C 84 386 228 HOH HOH . I 4 HOH C 85 387 230 HOH HOH . I 4 HOH C 86 388 231 HOH HOH . I 4 HOH C 87 389 234 HOH HOH . I 4 HOH C 88 390 236 HOH HOH . I 4 HOH C 89 391 237 HOH HOH . J 4 HOH D 1 258 21 HOH HOH . J 4 HOH D 2 259 26 HOH HOH . J 4 HOH D 3 260 33 HOH HOH . J 4 HOH D 4 261 44 HOH HOH . J 4 HOH D 5 262 46 HOH HOH . J 4 HOH D 6 263 49 HOH HOH . J 4 HOH D 7 264 57 HOH HOH . J 4 HOH D 8 265 63 HOH HOH . J 4 HOH D 9 266 83 HOH HOH . J 4 HOH D 10 267 92 HOH HOH . J 4 HOH D 11 268 97 HOH HOH . J 4 HOH D 12 269 107 HOH HOH . J 4 HOH D 13 270 114 HOH HOH . J 4 HOH D 14 271 123 HOH HOH . J 4 HOH D 15 272 140 HOH HOH . J 4 HOH D 16 273 145 HOH HOH . J 4 HOH D 17 274 156 HOH HOH . J 4 HOH D 18 275 172 HOH HOH . J 4 HOH D 19 276 178 HOH HOH . J 4 HOH D 20 277 190 HOH HOH . J 4 HOH D 21 278 201 HOH HOH . J 4 HOH D 22 279 204 HOH HOH . J 4 HOH D 23 280 208 HOH HOH . J 4 HOH D 24 281 209 HOH HOH . J 4 HOH D 25 282 217 HOH HOH . J 4 HOH D 26 283 225 HOH HOH . J 4 HOH D 27 284 239 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.528 _atom_site.Cartn_y 6.118 _atom_site.Cartn_z 27.6 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #