data_1FGS # _model_server_result.job_id JtMce40gbMXy-LRGSaNnXg _model_server_result.datetime_utc '2024-10-11 20:24:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":999}' # _entry.id 1FGS # _exptl.entry_id 1FGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.959 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYROPHOSPHATE 2-' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.3 _cell.angle_gamma 90 _cell.entry_id 1FGS _cell.length_a 54 _cell.length_b 46.1 _cell.length_c 84.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 73 A SER 73 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc2 A OE1 GLU 143 A GLU 143 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.139 ? metalc ? metalc3 A OE2 GLU 143 A GLU 143 1_555 B MG MG . A MG 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc4 B MG MG . A MG 998 1_555 C O1 POP . A POP 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? # _chem_comp.formula 'H2 O7 P2 -2' _chem_comp.formula_weight 175.959 _chem_comp.id POP _chem_comp.mon_nstd_flag . _chem_comp.name 'PYROPHOSPHATE 2-' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 POP doub 247 n n P1 O2 POP sing 248 n n P1 O3 POP sing 249 n n P1 O POP sing 250 n n O2 HO2 POP sing 251 n n O P2 POP sing 252 n n P2 O4 POP doub 253 n n P2 O5 POP sing 254 n n P2 O6 POP sing 255 n n O5 HO5 POP sing 256 n n # _atom_sites.entry_id 1FGS _atom_sites.fract_transf_matrix[1][1] 0.018519 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005768 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012337 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 998 998 MG MG . C 3 POP A 1 999 999 POP POP . D 4 HOH A 1 430 430 HOH HOH . D 4 HOH A 2 431 431 HOH HOH . D 4 HOH A 3 432 432 HOH HOH . D 4 HOH A 4 433 433 HOH HOH . D 4 HOH A 5 434 434 HOH HOH . D 4 HOH A 6 435 435 HOH HOH . D 4 HOH A 7 436 436 HOH HOH . D 4 HOH A 8 437 437 HOH HOH . D 4 HOH A 9 438 438 HOH HOH . D 4 HOH A 10 439 439 HOH HOH . D 4 HOH A 11 440 440 HOH HOH . D 4 HOH A 12 441 441 HOH HOH . D 4 HOH A 13 442 442 HOH HOH . D 4 HOH A 14 443 443 HOH HOH . D 4 HOH A 15 444 444 HOH HOH . D 4 HOH A 16 445 445 HOH HOH . D 4 HOH A 17 446 446 HOH HOH . D 4 HOH A 18 447 447 HOH HOH . D 4 HOH A 19 448 448 HOH HOH . D 4 HOH A 20 449 449 HOH HOH . D 4 HOH A 21 450 450 HOH HOH . D 4 HOH A 22 451 451 HOH HOH . D 4 HOH A 23 452 452 HOH HOH . D 4 HOH A 24 453 453 HOH HOH . D 4 HOH A 25 454 454 HOH HOH . D 4 HOH A 26 455 455 HOH HOH . D 4 HOH A 27 456 456 HOH HOH . D 4 HOH A 28 457 457 HOH HOH . D 4 HOH A 29 458 458 HOH HOH . D 4 HOH A 30 459 459 HOH HOH . D 4 HOH A 31 460 460 HOH HOH . D 4 HOH A 32 461 461 HOH HOH . D 4 HOH A 33 462 462 HOH HOH . D 4 HOH A 34 463 463 HOH HOH . D 4 HOH A 35 464 464 HOH HOH . D 4 HOH A 36 465 465 HOH HOH . D 4 HOH A 37 466 466 HOH HOH . D 4 HOH A 38 467 467 HOH HOH . D 4 HOH A 39 468 468 HOH HOH . D 4 HOH A 40 469 469 HOH HOH . D 4 HOH A 41 470 470 HOH HOH . D 4 HOH A 42 471 471 HOH HOH . D 4 HOH A 43 472 472 HOH HOH . D 4 HOH A 44 473 473 HOH HOH . D 4 HOH A 45 474 474 HOH HOH . D 4 HOH A 46 475 475 HOH HOH . D 4 HOH A 47 476 476 HOH HOH . D 4 HOH A 48 477 477 HOH HOH . D 4 HOH A 49 478 478 HOH HOH . D 4 HOH A 50 479 479 HOH HOH . D 4 HOH A 51 480 480 HOH HOH . D 4 HOH A 52 481 481 HOH HOH . D 4 HOH A 53 482 482 HOH HOH . D 4 HOH A 54 483 483 HOH HOH . D 4 HOH A 55 484 484 HOH HOH . D 4 HOH A 56 485 485 HOH HOH . D 4 HOH A 57 486 486 HOH HOH . D 4 HOH A 58 487 487 HOH HOH . D 4 HOH A 59 488 488 HOH HOH . D 4 HOH A 60 489 489 HOH HOH . D 4 HOH A 61 490 490 HOH HOH . D 4 HOH A 62 491 491 HOH HOH . D 4 HOH A 63 492 492 HOH HOH . D 4 HOH A 64 493 493 HOH HOH . D 4 HOH A 65 494 494 HOH HOH . D 4 HOH A 66 495 495 HOH HOH . D 4 HOH A 67 496 496 HOH HOH . D 4 HOH A 68 497 497 HOH HOH . D 4 HOH A 69 498 498 HOH HOH . D 4 HOH A 70 499 499 HOH HOH . D 4 HOH A 71 500 500 HOH HOH . D 4 HOH A 72 501 501 HOH HOH . D 4 HOH A 73 502 502 HOH HOH . D 4 HOH A 74 503 503 HOH HOH . D 4 HOH A 75 504 504 HOH HOH . D 4 HOH A 76 505 505 HOH HOH . D 4 HOH A 77 506 506 HOH HOH . D 4 HOH A 78 507 507 HOH HOH . D 4 HOH A 79 508 508 HOH HOH . D 4 HOH A 80 509 509 HOH HOH . D 4 HOH A 81 510 510 HOH HOH . D 4 HOH A 82 511 511 HOH HOH . D 4 HOH A 83 512 512 HOH HOH . D 4 HOH A 84 513 513 HOH HOH . D 4 HOH A 85 514 514 HOH HOH . D 4 HOH A 86 515 515 HOH HOH . D 4 HOH A 87 516 516 HOH HOH . D 4 HOH A 88 517 517 HOH HOH . D 4 HOH A 89 518 518 HOH HOH . D 4 HOH A 90 519 519 HOH HOH . D 4 HOH A 91 520 520 HOH HOH . D 4 HOH A 92 521 521 HOH HOH . D 4 HOH A 93 522 522 HOH HOH . D 4 HOH A 94 523 523 HOH HOH . D 4 HOH A 95 524 524 HOH HOH . D 4 HOH A 96 525 525 HOH HOH . D 4 HOH A 97 526 526 HOH HOH . D 4 HOH A 98 527 527 HOH HOH . D 4 HOH A 99 528 528 HOH HOH . D 4 HOH A 100 529 529 HOH HOH . D 4 HOH A 101 530 530 HOH HOH . D 4 HOH A 102 531 531 HOH HOH . D 4 HOH A 103 532 532 HOH HOH . D 4 HOH A 104 533 533 HOH HOH . D 4 HOH A 105 534 534 HOH HOH . D 4 HOH A 106 535 535 HOH HOH . D 4 HOH A 107 536 536 HOH HOH . D 4 HOH A 108 537 537 HOH HOH . D 4 HOH A 109 538 538 HOH HOH . D 4 HOH A 110 539 539 HOH HOH . D 4 HOH A 111 540 540 HOH HOH . D 4 HOH A 112 541 541 HOH HOH . D 4 HOH A 113 542 542 HOH HOH . D 4 HOH A 114 543 543 HOH HOH . D 4 HOH A 115 544 544 HOH HOH . D 4 HOH A 116 545 545 HOH HOH . D 4 HOH A 117 546 546 HOH HOH . D 4 HOH A 118 547 547 HOH HOH . D 4 HOH A 119 548 548 HOH HOH . D 4 HOH A 120 549 549 HOH HOH . D 4 HOH A 121 550 550 HOH HOH . D 4 HOH A 122 551 551 HOH HOH . D 4 HOH A 123 552 552 HOH HOH . D 4 HOH A 124 554 554 HOH HOH . D 4 HOH A 125 555 555 HOH HOH . D 4 HOH A 126 556 556 HOH HOH . D 4 HOH A 127 557 557 HOH HOH . D 4 HOH A 128 558 558 HOH HOH . D 4 HOH A 129 560 560 HOH HOH . D 4 HOH A 130 561 561 HOH HOH . D 4 HOH A 131 562 562 HOH HOH . D 4 HOH A 132 563 563 HOH HOH . D 4 HOH A 133 564 564 HOH HOH . D 4 HOH A 134 565 565 HOH HOH . D 4 HOH A 135 566 566 HOH HOH . D 4 HOH A 136 568 568 HOH HOH . D 4 HOH A 137 570 570 HOH HOH . D 4 HOH A 138 571 571 HOH HOH . D 4 HOH A 139 572 572 HOH HOH . D 4 HOH A 140 573 573 HOH HOH . D 4 HOH A 141 574 574 HOH HOH . D 4 HOH A 142 575 575 HOH HOH . D 4 HOH A 143 577 577 HOH HOH . D 4 HOH A 144 578 578 HOH HOH . D 4 HOH A 145 579 579 HOH HOH . D 4 HOH A 146 581 581 HOH HOH . D 4 HOH A 147 583 583 HOH HOH . D 4 HOH A 148 586 586 HOH HOH . D 4 HOH A 149 587 587 HOH HOH . D 4 HOH A 150 588 588 HOH HOH . D 4 HOH A 151 590 590 HOH HOH . D 4 HOH A 152 591 591 HOH HOH . D 4 HOH A 153 592 592 HOH HOH . D 4 HOH A 154 594 594 HOH HOH . D 4 HOH A 155 596 596 HOH HOH . D 4 HOH A 156 597 597 HOH HOH . D 4 HOH A 157 601 601 HOH HOH . D 4 HOH A 158 602 602 HOH HOH . D 4 HOH A 159 603 603 HOH HOH . D 4 HOH A 160 604 604 HOH HOH . D 4 HOH A 161 606 606 HOH HOH . D 4 HOH A 162 607 607 HOH HOH . D 4 HOH A 163 608 608 HOH HOH . D 4 HOH A 164 609 609 HOH HOH . D 4 HOH A 165 612 612 HOH HOH . D 4 HOH A 166 614 614 HOH HOH . D 4 HOH A 167 615 615 HOH HOH . D 4 HOH A 168 616 616 HOH HOH . D 4 HOH A 169 617 617 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 POP . . . C 3 51.354 34.347 24.315 0.5 27.97 ? P1 POP 999 A 1 HETATM 2 O O1 POP . . . C 3 52.467 34.832 23.431 0.5 18.83 ? O1 POP 999 A 1 HETATM 3 O O2 POP . . . C 3 51.648 33.001 24.91 0.5 15 ? O2 POP 999 A 1 HETATM 4 O O3 POP . . . C 3 50.102 34.208 23.527 0.5 21.43 ? O3 POP 999 A 1 HETATM 5 O O POP . . . C 3 51.169 35.413 25.483 0.5 15.06 ? O POP 999 A 1 HETATM 6 P P2 POP . . . C 3 52.02 35.563 26.825 0.5 18.78 ? P2 POP 999 A 1 HETATM 7 O O4 POP . . . C 3 53.067 36.632 26.682 0.5 22.65 ? O4 POP 999 A 1 HETATM 8 O O5 POP . . . C 3 51.08 35.934 27.936 0.5 61.51 ? O5 POP 999 A 1 HETATM 9 O O6 POP . . . C 3 52.739 34.169 27.164 0.5 52.22 ? O6 POP 999 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 9 #