data_1FK0 # _model_server_result.job_id v2N5uMNcQ85rdAYO0opVEA _model_server_result.datetime_utc '2024-11-26 17:32:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fk0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 1FK0 # _exptl.entry_id 1FK0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 172.265 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DECANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FK0 _cell.length_a 24.75 _cell.length_b 49.87 _cell.length_c 69.42 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FK0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 52 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf3 A SG CYS 30 A CYS 30 1_555 A SG CYS 75 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 A SG CYS 50 A CYS 50 1_555 A SG CYS 89 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? # _chem_comp.formula 'C10 H20 O2' _chem_comp.formula_weight 172.265 _chem_comp.id DKA _chem_comp.mon_nstd_flag . _chem_comp.name 'DECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 DKA doub 83 n n C1 C2 DKA sing 84 n n C1 O2 DKA sing 85 n n C2 C3 DKA sing 86 n n C2 H21 DKA sing 87 n n C2 H22 DKA sing 88 n n C3 C4 DKA sing 89 n n C3 H31 DKA sing 90 n n C3 H32 DKA sing 91 n n C4 C5 DKA sing 92 n n C4 H41 DKA sing 93 n n C4 H42 DKA sing 94 n n C5 C6 DKA sing 95 n n C5 H51 DKA sing 96 n n C5 H52 DKA sing 97 n n C6 C7 DKA sing 98 n n C6 H61 DKA sing 99 n n C6 H62 DKA sing 100 n n C7 C8 DKA sing 101 n n C7 H71 DKA sing 102 n n C7 H72 DKA sing 103 n n C8 C9 DKA sing 104 n n C8 H81 DKA sing 105 n n C8 H82 DKA sing 106 n n C9 C10 DKA sing 107 n n C9 H91 DKA sing 108 n n C9 H92 DKA sing 109 n n C10 H101 DKA sing 110 n n C10 H102 DKA sing 111 n n C10 H103 DKA sing 112 n n O2 HO2 DKA sing 113 n n # _atom_sites.entry_id 1FK0 _atom_sites.fract_transf_matrix[1][1] 0.040404 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DKA A 1 201 201 DKA CRC . C 3 FMT A 1 202 202 FMT FMT . D 3 FMT A 1 206 206 FMT FMT . E 4 HOH A 1 103 103 HOH H2O . E 4 HOH A 2 105 105 HOH H2O . E 4 HOH A 3 106 106 HOH H2O . E 4 HOH A 4 109 109 HOH H2O . E 4 HOH A 5 110 110 HOH H2O . E 4 HOH A 6 111 111 HOH H2O . E 4 HOH A 7 113 113 HOH H2O . E 4 HOH A 8 114 114 HOH H2O . E 4 HOH A 9 115 115 HOH H2O . E 4 HOH A 10 117 117 HOH H2O . E 4 HOH A 11 118 118 HOH H2O . E 4 HOH A 12 119 119 HOH H2O . E 4 HOH A 13 121 121 HOH H2O . E 4 HOH A 14 122 122 HOH H2O . E 4 HOH A 15 125 125 HOH H2O . E 4 HOH A 16 130 130 HOH H2O . E 4 HOH A 17 132 132 HOH H2O . E 4 HOH A 18 133 133 HOH H2O . E 4 HOH A 19 134 134 HOH H2O . E 4 HOH A 20 135 135 HOH H2O . E 4 HOH A 21 136 136 HOH H2O . E 4 HOH A 22 137 137 HOH H2O . E 4 HOH A 23 138 138 HOH H2O . E 4 HOH A 24 139 139 HOH H2O . E 4 HOH A 25 141 141 HOH H2O . E 4 HOH A 26 142 142 HOH H2O . E 4 HOH A 27 145 145 HOH H2O . E 4 HOH A 28 149 149 HOH H2O . E 4 HOH A 29 151 151 HOH H2O . E 4 HOH A 30 154 154 HOH H2O . E 4 HOH A 31 157 157 HOH H2O . E 4 HOH A 32 162 162 HOH H2O . E 4 HOH A 33 164 164 HOH H2O . E 4 HOH A 34 165 165 HOH H2O . E 4 HOH A 35 166 166 HOH H2O . E 4 HOH A 36 167 167 HOH H2O . E 4 HOH A 37 169 169 HOH H2O . E 4 HOH A 38 170 170 HOH H2O . E 4 HOH A 39 172 172 HOH H2O . E 4 HOH A 40 175 175 HOH H2O . E 4 HOH A 41 176 176 HOH H2O . E 4 HOH A 42 178 178 HOH H2O . E 4 HOH A 43 179 179 HOH H2O . E 4 HOH A 44 180 180 HOH H2O . E 4 HOH A 45 181 181 HOH H2O . E 4 HOH A 46 184 184 HOH H2O . E 4 HOH A 47 185 185 HOH H2O . E 4 HOH A 48 186 186 HOH H2O . E 4 HOH A 49 301 301 HOH H2O . E 4 HOH A 50 302 302 HOH H2O . E 4 HOH A 51 303 303 HOH H2O . E 4 HOH A 52 304 304 HOH H2O . E 4 HOH A 53 305 305 HOH H2O . E 4 HOH A 54 306 306 HOH H2O . E 4 HOH A 55 307 307 HOH H2O . E 4 HOH A 56 308 308 HOH H2O . E 4 HOH A 57 309 309 HOH H2O . E 4 HOH A 58 312 312 HOH H2O . E 4 HOH A 59 313 313 HOH H2O . E 4 HOH A 60 314 314 HOH H2O . E 4 HOH A 61 315 315 HOH H2O . E 4 HOH A 62 316 316 HOH H2O . E 4 HOH A 63 317 317 HOH H2O . E 4 HOH A 64 318 318 HOH H2O . E 4 HOH A 65 400 400 HOH H2O . E 4 HOH A 66 401 401 HOH H2O . E 4 HOH A 67 402 402 HOH H2O . E 4 HOH A 68 403 403 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DKA . . . B 2 23.132 38.214 21.24 1 49.41 ? C1 DKA 201 A 1 HETATM 2 O O1 DKA . . . B 2 22.027 38.927 21.013 1 50.8 ? O1 DKA 201 A 1 HETATM 3 C C2 DKA . . . B 2 22.787 36.806 21.708 1 46.54 ? C2 DKA 201 A 1 HETATM 4 C C3 DKA . . . B 2 24.042 36.243 22.38 1 41.87 ? C3 DKA 201 A 1 HETATM 5 C C4 DKA . . . B 2 23.858 34.842 22.916 1 38.94 ? C4 DKA 201 A 1 HETATM 6 C C5 DKA . . . B 2 24.669 34.575 24.172 1 36.92 ? C5 DKA 201 A 1 HETATM 7 C C6 DKA . . . B 2 24.006 33.572 25.095 1 35.69 ? C6 DKA 201 A 1 HETATM 8 C C7 DKA . . . B 2 24.767 33.319 26.379 1 35.46 ? C7 DKA 201 A 1 HETATM 9 C C8 DKA . . . B 2 24.052 32.337 27.282 1 37.8 ? C8 DKA 201 A 1 HETATM 10 C C9 DKA . . . B 2 23.709 32.911 28.64 1 38.8 ? C9 DKA 201 A 1 HETATM 11 C C10 DKA . . . B 2 23.322 31.864 29.68 1 38.48 ? C10 DKA 201 A 1 HETATM 12 O O2 DKA . . . B 2 24.256 38.652 21.185 1 54.04 ? O2 DKA 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #