data_1FK6 # _model_server_result.job_id WqF3bhBTbGDV_ID-DY0cJQ _model_server_result.datetime_utc '2024-11-24 12:08:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fk6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 1FK6 # _exptl.entry_id 1FK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FK6 _cell.length_a 25.04 _cell.length_b 50.36 _cell.length_c 69.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 52 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 A SG CYS 30 A CYS 30 1_555 A SG CYS 75 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf4 A SG CYS 50 A CYS 50 1_555 A SG CYS 89 A CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 1FK6 _atom_sites.fract_transf_matrix[1][1] 0.039936 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019857 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LNL A 1 1201 1201 LNL LNL . C 3 FMT A 1 401 401 FMT FMT . D 3 FMT A 1 403 403 FMT FMT . E 4 HOH A 1 105 105 HOH H2O . E 4 HOH A 2 109 109 HOH H2O . E 4 HOH A 3 110 110 HOH H2O . E 4 HOH A 4 115 115 HOH H2O . E 4 HOH A 5 117 117 HOH H2O . E 4 HOH A 6 118 118 HOH H2O . E 4 HOH A 7 119 119 HOH H2O . E 4 HOH A 8 120 120 HOH H2O . E 4 HOH A 9 128 128 HOH H2O . E 4 HOH A 10 130 130 HOH H2O . E 4 HOH A 11 133 133 HOH H2O . E 4 HOH A 12 145 145 HOH H2O . E 4 HOH A 13 150 150 HOH H2O . E 4 HOH A 14 152 152 HOH H2O . E 4 HOH A 15 162 162 HOH H2O . E 4 HOH A 16 163 163 HOH H2O . E 4 HOH A 17 165 165 HOH H2O . E 4 HOH A 18 166 166 HOH H2O . E 4 HOH A 19 172 172 HOH H2O . E 4 HOH A 20 173 173 HOH H2O . E 4 HOH A 21 178 178 HOH H2O . E 4 HOH A 22 180 180 HOH H2O . E 4 HOH A 23 184 184 HOH H2O . E 4 HOH A 24 189 189 HOH H2O . E 4 HOH A 25 190 190 HOH H2O . E 4 HOH A 26 191 191 HOH H2O . E 4 HOH A 27 192 192 HOH H2O . E 4 HOH A 28 193 193 HOH H2O . E 4 HOH A 29 194 194 HOH H2O . E 4 HOH A 30 195 195 HOH H2O . E 4 HOH A 31 196 196 HOH H2O . E 4 HOH A 32 198 198 HOH H2O . E 4 HOH A 33 199 199 HOH H2O . E 4 HOH A 34 200 200 HOH H2O . E 4 HOH A 35 201 201 HOH H2O . E 4 HOH A 36 202 202 HOH H2O . E 4 HOH A 37 203 203 HOH H2O . E 4 HOH A 38 204 204 HOH H2O . E 4 HOH A 39 205 205 HOH H2O . E 4 HOH A 40 206 206 HOH H2O . E 4 HOH A 41 207 207 HOH H2O . E 4 HOH A 42 208 208 HOH H2O . E 4 HOH A 43 209 209 HOH H2O . E 4 HOH A 44 210 210 HOH H2O . E 4 HOH A 45 211 211 HOH H2O . E 4 HOH A 46 212 212 HOH H2O . E 4 HOH A 47 213 213 HOH H2O . E 4 HOH A 48 214 214 HOH H2O . E 4 HOH A 49 215 215 HOH H2O . E 4 HOH A 50 216 216 HOH H2O . E 4 HOH A 51 217 217 HOH H2O . E 4 HOH A 52 218 218 HOH H2O . E 4 HOH A 53 219 219 HOH H2O . E 4 HOH A 54 220 220 HOH H2O . E 4 HOH A 55 221 221 HOH H2O . E 4 HOH A 56 223 223 HOH H2O . E 4 HOH A 57 224 224 HOH H2O . E 4 HOH A 58 225 225 HOH H2O . E 4 HOH A 59 226 226 HOH H2O . E 4 HOH A 60 227 227 HOH H2O . E 4 HOH A 61 230 230 HOH H2O . E 4 HOH A 62 231 231 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 3 22.838 47.699 33.404 1 28.08 ? C FMT 403 A 1 HETATM 2 O O1 FMT . . . D 3 23.937 47.721 32.793 1 30.14 ? O1 FMT 403 A 1 HETATM 3 O O2 FMT . . . D 3 22.561 46.837 34.272 1 28.23 ? O2 FMT 403 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #