data_1FKF # _model_server_result.job_id RuenFMLQVP4xw7JwX8DxzQ _model_server_result.datetime_utc '2024-11-22 05:08:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fkf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":108}' # _entry.id 1FKF # _exptl.entry_id 1FKF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 804.018 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FKF _cell.length_a 58.07 _cell.length_b 58.07 _cell.length_c 55.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FKF _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 55.65 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C44 H69 N O12' _chem_comp.formula_weight 804.018 _chem_comp.id FK5 _chem_comp.mon_nstd_flag . _chem_comp.name 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms K506 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FK5 sing 83 n n C1 O1 FK5 sing 84 n n C1 O2 FK5 doub 85 n n C2 C3 FK5 sing 86 n n C2 N7 FK5 sing 87 n n C2 H2 FK5 sing 88 n n C3 C4 FK5 sing 89 n n C3 H31A FK5 sing 90 n n C3 H32A FK5 sing 91 n n C4 C5 FK5 sing 92 n n C4 H41 FK5 sing 93 n n C4 H42 FK5 sing 94 n n C5 C6 FK5 sing 95 n n C5 H51 FK5 sing 96 n n C5 H52 FK5 sing 97 n n C6 N7 FK5 sing 98 n n C6 H61 FK5 sing 99 n n C6 H62 FK5 sing 100 n n C8 C9 FK5 sing 101 n n C8 N7 FK5 sing 102 n n C8 O3 FK5 doub 103 n n C9 C10 FK5 sing 104 n n C9 O4 FK5 doub 105 n n C10 C11 FK5 sing 106 n n C10 O5 FK5 sing 107 n n C10 O6 FK5 sing 108 n n C11 C12 FK5 sing 109 n n C11 C35 FK5 sing 110 n n C11 H11 FK5 sing 111 n n C12 C13 FK5 sing 112 n n C12 H121 FK5 sing 113 n n C12 H122 FK5 sing 114 n n C13 C14 FK5 sing 115 n n C13 O7 FK5 sing 116 n n C13 H13 FK5 sing 117 n n C14 C15 FK5 sing 118 n n C14 O5 FK5 sing 119 n n C14 H14 FK5 sing 120 n n C15 C16 FK5 sing 121 n n C15 O8 FK5 sing 122 n n C15 H15 FK5 sing 123 n n C16 C17 FK5 sing 124 n n C16 H161 FK5 sing 125 n n C16 H162 FK5 sing 126 n n C17 C18 FK5 sing 127 n n C17 C36 FK5 sing 128 n n C17 H17 FK5 sing 129 n n C18 C19 FK5 sing 130 n n C18 H181 FK5 sing 131 n n C18 H182 FK5 sing 132 n n C19 C20 FK5 doub 133 e n C19 C37 FK5 sing 134 n n C20 C21 FK5 sing 135 n n C20 H20 FK5 sing 136 n n C21 C22 FK5 sing 137 n n C21 C38 FK5 sing 138 n n C21 H21 FK5 sing 139 n n C22 C23 FK5 sing 140 n n C22 O9 FK5 doub 141 n n C23 C24 FK5 sing 142 n n C23 H231 FK5 sing 143 n n C23 H232 FK5 sing 144 n n C24 C25 FK5 sing 145 n n C24 O10 FK5 sing 146 n n C24 H24 FK5 sing 147 n n C25 C26 FK5 sing 148 n n C25 C41 FK5 sing 149 n n C25 H25 FK5 sing 150 n n C26 C27 FK5 sing 151 n n C26 O1 FK5 sing 152 n n C26 H26 FK5 sing 153 n n C27 C28 FK5 doub 154 e n C27 C42 FK5 sing 155 n n C28 C29 FK5 sing 156 n n C28 H28 FK5 sing 157 n n C29 C30 FK5 sing 158 n n C29 C34 FK5 sing 159 n n C29 H29 FK5 sing 160 n n C30 C31 FK5 sing 161 n n C30 H301 FK5 sing 162 n n C30 H302 FK5 sing 163 n n C31 C32 FK5 sing 164 n n C31 O11 FK5 sing 165 n n C31 H31 FK5 sing 166 n n C32 C33 FK5 sing 167 n n C32 O12 FK5 sing 168 n n C32 H32 FK5 sing 169 n n C33 C34 FK5 sing 170 n n C33 H331 FK5 sing 171 n n C33 H332 FK5 sing 172 n n C34 H341 FK5 sing 173 n n C34 H342 FK5 sing 174 n n C35 H351 FK5 sing 175 n n C35 H352 FK5 sing 176 n n C35 H353 FK5 sing 177 n n C36 H361 FK5 sing 178 n n C36 H362 FK5 sing 179 n n C36 H363 FK5 sing 180 n n C37 H371 FK5 sing 181 n n C37 H372 FK5 sing 182 n n C37 H373 FK5 sing 183 n n C38 C39 FK5 sing 184 n n C38 H381 FK5 sing 185 n n C38 H382 FK5 sing 186 n n C39 C40 FK5 doub 187 n n C39 H39 FK5 sing 188 n n C40 H401 FK5 sing 189 n n C40 H402 FK5 sing 190 n n C41 H411 FK5 sing 191 n n C41 H412 FK5 sing 192 n n C41 H413 FK5 sing 193 n n C42 H421 FK5 sing 194 n n C42 H422 FK5 sing 195 n n C42 H423 FK5 sing 196 n n C43 O7 FK5 sing 197 n n C43 H431 FK5 sing 198 n n C43 H432 FK5 sing 199 n n C43 H433 FK5 sing 200 n n C44 O8 FK5 sing 201 n n C44 H441 FK5 sing 202 n n C44 H442 FK5 sing 203 n n C44 H443 FK5 sing 204 n n C45 O11 FK5 sing 205 n n C45 H451 FK5 sing 206 n n C45 H452 FK5 sing 207 n n C45 H453 FK5 sing 208 n n O6 HO6 FK5 sing 209 n n O10 HO10 FK5 sing 210 n n O12 HO12 FK5 sing 211 n n # _atom_sites.entry_id 1FKF _atom_sites.fract_transf_matrix[1][1] 0.017221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FK5 A 1 108 108 FK5 FK5 . C 3 HOH A 1 109 1 HOH HOH . C 3 HOH A 2 110 2 HOH HOH . C 3 HOH A 3 111 3 HOH HOH . C 3 HOH A 4 112 4 HOH HOH . C 3 HOH A 5 113 5 HOH HOH . C 3 HOH A 6 114 6 HOH HOH . C 3 HOH A 7 115 7 HOH HOH . C 3 HOH A 8 116 8 HOH HOH . C 3 HOH A 9 117 9 HOH HOH . C 3 HOH A 10 118 10 HOH HOH . C 3 HOH A 11 119 11 HOH HOH . C 3 HOH A 12 120 12 HOH HOH . C 3 HOH A 13 121 13 HOH HOH . C 3 HOH A 14 122 14 HOH HOH . C 3 HOH A 15 123 15 HOH HOH . C 3 HOH A 16 124 16 HOH HOH . C 3 HOH A 17 125 17 HOH HOH . C 3 HOH A 18 126 18 HOH HOH . C 3 HOH A 19 127 19 HOH HOH . C 3 HOH A 20 128 20 HOH HOH . C 3 HOH A 21 129 21 HOH HOH . C 3 HOH A 22 130 22 HOH HOH . C 3 HOH A 23 131 23 HOH HOH . C 3 HOH A 24 132 24 HOH HOH . C 3 HOH A 25 133 25 HOH HOH . C 3 HOH A 26 134 26 HOH HOH . C 3 HOH A 27 135 27 HOH HOH . C 3 HOH A 28 136 28 HOH HOH . C 3 HOH A 29 137 29 HOH HOH . C 3 HOH A 30 138 30 HOH HOH . C 3 HOH A 31 139 31 HOH HOH . C 3 HOH A 32 140 32 HOH HOH . C 3 HOH A 33 141 33 HOH HOH . C 3 HOH A 34 142 34 HOH HOH . C 3 HOH A 35 143 35 HOH HOH . C 3 HOH A 36 144 36 HOH HOH . C 3 HOH A 37 145 37 HOH HOH . C 3 HOH A 38 146 38 HOH HOH . C 3 HOH A 39 147 39 HOH HOH . C 3 HOH A 40 148 40 HOH HOH . C 3 HOH A 41 149 41 HOH HOH . C 3 HOH A 42 150 42 HOH HOH . C 3 HOH A 43 151 43 HOH HOH . C 3 HOH A 44 152 44 HOH HOH . C 3 HOH A 45 153 45 HOH HOH . C 3 HOH A 46 154 46 HOH HOH . C 3 HOH A 47 155 47 HOH HOH . C 3 HOH A 48 156 48 HOH HOH . C 3 HOH A 49 157 49 HOH HOH . C 3 HOH A 50 158 50 HOH HOH . C 3 HOH A 51 159 51 HOH HOH . C 3 HOH A 52 160 52 HOH HOH . C 3 HOH A 53 161 53 HOH HOH . C 3 HOH A 54 162 54 HOH HOH . C 3 HOH A 55 163 55 HOH HOH . C 3 HOH A 56 164 56 HOH HOH . C 3 HOH A 57 165 57 HOH HOH . C 3 HOH A 58 166 58 HOH HOH . C 3 HOH A 59 167 59 HOH HOH . C 3 HOH A 60 168 60 HOH HOH . C 3 HOH A 61 169 61 HOH HOH . C 3 HOH A 62 170 62 HOH HOH . C 3 HOH A 63 171 63 HOH HOH . C 3 HOH A 64 172 64 HOH HOH . C 3 HOH A 65 173 65 HOH HOH . C 3 HOH A 66 174 66 HOH HOH . C 3 HOH A 67 175 67 HOH HOH . C 3 HOH A 68 176 68 HOH HOH . C 3 HOH A 69 177 69 HOH HOH . C 3 HOH A 70 178 70 HOH HOH . C 3 HOH A 71 179 71 HOH HOH . C 3 HOH A 72 180 72 HOH HOH . C 3 HOH A 73 181 73 HOH HOH . C 3 HOH A 74 182 74 HOH HOH . C 3 HOH A 75 183 75 HOH HOH . C 3 HOH A 76 184 76 HOH HOH . C 3 HOH A 77 185 77 HOH HOH . C 3 HOH A 78 186 78 HOH HOH . C 3 HOH A 79 187 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FK5 . . . B 2 19.964 28.622 21.793 1 9.41 ? C1 FK5 108 A 1 HETATM 2 C C2 FK5 . . . B 2 18.591 29.242 21.936 1 6.57 ? C2 FK5 108 A 1 HETATM 3 C C3 FK5 . . . B 2 17.938 29.352 20.56 1 5 ? C3 FK5 108 A 1 HETATM 4 C C4 FK5 . . . B 2 18.516 30.51 19.76 1 6.48 ? C4 FK5 108 A 1 HETATM 5 C C5 FK5 . . . B 2 18.261 31.813 20.491 1 5.95 ? C5 FK5 108 A 1 HETATM 6 C C6 FK5 . . . B 2 18.979 31.722 21.823 1 5.93 ? C6 FK5 108 A 1 HETATM 7 C C8 FK5 . . . B 2 17.895 30.641 23.795 1 5.76 ? C8 FK5 108 A 1 HETATM 8 C C9 FK5 . . . B 2 17.727 31.953 24.508 1 7.21 ? C9 FK5 108 A 1 HETATM 9 C C10 FK5 . . . B 2 18.806 32.419 25.509 1 6.69 ? C10 FK5 108 A 1 HETATM 10 C C11 FK5 . . . B 2 19.432 31.287 26.33 1 7.95 ? C11 FK5 108 A 1 HETATM 11 C C12 FK5 . . . B 2 20.773 31.749 26.905 1 8.6 ? C12 FK5 108 A 1 HETATM 12 C C13 FK5 . . . B 2 21.707 32.472 25.896 1 12 ? C13 FK5 108 A 1 HETATM 13 C C14 FK5 . . . B 2 20.879 33.641 25.251 1 12 ? C14 FK5 108 A 1 HETATM 14 C C15 FK5 . . . B 2 21.566 34.517 24.194 1 12.33 ? C15 FK5 108 A 1 HETATM 15 C C16 FK5 . . . B 2 22.406 33.682 23.214 1 5.75 ? C16 FK5 108 A 1 HETATM 16 C C17 FK5 . . . B 2 22.926 34.397 21.94 1 8.64 ? C17 FK5 108 A 1 HETATM 17 C C18 FK5 . . . B 2 24.321 34.971 22.243 1 9.46 ? C18 FK5 108 A 1 HETATM 18 C C19 FK5 . . . B 2 25.408 33.947 22.06 1 6.54 ? C19 FK5 108 A 1 HETATM 19 C C20 FK5 . . . B 2 25.899 33.336 23.13 1 6.69 ? C20 FK5 108 A 1 HETATM 20 C C21 FK5 . . . B 2 26.951 32.237 23.12 1 7.96 ? C21 FK5 108 A 1 HETATM 21 C C22 FK5 . . . B 2 26.218 30.91 23.254 1 8.87 ? C22 FK5 108 A 1 HETATM 22 C C23 FK5 . . . B 2 25.84 30.225 21.947 1 8.14 ? C23 FK5 108 A 1 HETATM 23 C C24 FK5 . . . B 2 24.769 29.174 22.098 1 8.29 ? C24 FK5 108 A 1 HETATM 24 C C25 FK5 . . . B 2 23.324 29.818 22.186 1 6.53 ? C25 FK5 108 A 1 HETATM 25 C C26 FK5 . . . B 2 22.261 28.687 22.383 1 6.79 ? C26 FK5 108 A 1 HETATM 26 C C27 FK5 . . . B 2 22.57 27.848 23.62 1 10.16 ? C27 FK5 108 A 1 HETATM 27 C C28 FK5 . . . B 2 22.881 26.576 23.404 1 10.17 ? C28 FK5 108 A 1 HETATM 28 C C29 FK5 . . . B 2 23.321 25.611 24.474 1 8.79 ? C29 FK5 108 A 1 HETATM 29 C C30 FK5 . . . B 2 22.438 24.356 24.477 1 18.8 ? C30 FK5 108 A 1 HETATM 30 C C31 FK5 . . . B 2 22.975 23.133 25.206 1 14.73 ? C31 FK5 108 A 1 HETATM 31 C C32 FK5 . . . B 2 24.41 22.91 24.788 1 12.57 ? C32 FK5 108 A 1 HETATM 32 C C33 FK5 . . . B 2 25.235 24.158 25.032 1 10.69 ? C33 FK5 108 A 1 HETATM 33 C C34 FK5 . . . B 2 24.735 25.229 24.086 1 9.4 ? C34 FK5 108 A 1 HETATM 34 C C35 FK5 . . . B 2 18.523 30.823 27.459 1 10.49 ? C35 FK5 108 A 1 HETATM 35 C C36 FK5 . . . B 2 21.996 35.541 21.502 1 8.84 ? C36 FK5 108 A 1 HETATM 36 C C37 FK5 . . . B 2 25.817 33.733 20.588 1 9.73 ? C37 FK5 108 A 1 HETATM 37 C C38 FK5 . . . B 2 27.951 32.44 24.303 1 10.61 ? C38 FK5 108 A 1 HETATM 38 C C39 FK5 . . . B 2 29.006 31.351 24.563 1 16.82 ? C39 FK5 108 A 1 HETATM 39 C C40 FK5 . . . B 2 29.752 30.769 23.642 1 18.51 ? C40 FK5 108 A 1 HETATM 40 C C41 FK5 . . . B 2 22.972 30.605 20.888 1 6.69 ? C41 FK5 108 A 1 HETATM 41 C C42 FK5 . . . B 2 22.499 28.517 25.001 1 12.65 ? C42 FK5 108 A 1 HETATM 42 C C43 FK5 . . . B 2 24.048 32.094 26.508 1 11.31 ? C43 FK5 108 A 1 HETATM 43 C C44 FK5 . . . B 2 21.649 36.654 25.316 1 11.42 ? C44 FK5 108 A 1 HETATM 44 C C45 FK5 . . . B 2 21.177 21.679 25.923 1 18.41 ? C45 FK5 108 A 1 HETATM 45 N N7 FK5 . . . B 2 18.477 30.555 22.581 1 5.38 ? N7 FK5 108 A 1 HETATM 46 O O1 FK5 . . . B 2 20.924 29.273 22.46 1 5.64 ? O1 FK5 108 A 1 HETATM 47 O O2 FK5 . . . B 2 20.122 27.647 21.071 1 8.83 ? O2 FK5 108 A 1 HETATM 48 O O3 FK5 . . . B 2 17.458 29.628 24.376 1 9.03 ? O3 FK5 108 A 1 HETATM 49 O O4 FK5 . . . B 2 16.719 32.625 24.281 1 10.05 ? O4 FK5 108 A 1 HETATM 50 O O5 FK5 . . . B 2 19.773 33 24.604 1 8.02 ? O5 FK5 108 A 1 HETATM 51 O O6 FK5 . . . B 2 18.33 33.425 26.371 1 6.63 ? O6 FK5 108 A 1 HETATM 52 O O7 FK5 . . . B 2 22.913 32.99 26.524 1 10.12 ? O7 FK5 108 A 1 HETATM 53 O O8 FK5 . . . B 2 22.375 35.486 24.88 1 10.91 ? O8 FK5 108 A 1 HETATM 54 O O9 FK5 . . . B 2 25.931 30.441 24.364 1 10.36 ? O9 FK5 108 A 1 HETATM 55 O O10 FK5 . . . B 2 24.845 28.287 20.973 1 16.99 ? O10 FK5 108 A 1 HETATM 56 O O11 FK5 . . . B 2 22.231 21.923 24.979 1 15.29 ? O11 FK5 108 A 1 HETATM 57 O O12 FK5 . . . B 2 24.898 21.836 25.57 1 21.15 ? O12 FK5 108 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 57 #