data_1FKJ # _model_server_result.job_id SyWoJpL8k5uCVHl9Tpkhow _model_server_result.datetime_utc '2024-11-26 01:20:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fkj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":108}' # _entry.id 1FKJ # _exptl.entry_id 1FKJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 804.018 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FKJ _cell.length_a 58.1 _cell.length_b 58.1 _cell.length_c 55.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FKJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2 A,B,C 2 1,3,2,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 55.7 3 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 58.1 58.1 0 4 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 58.1 58.1 55.7 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C44 H69 N O12' _chem_comp.formula_weight 804.018 _chem_comp.id FK5 _chem_comp.mon_nstd_flag . _chem_comp.name 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms K506 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FK5 sing 83 n n C1 O1 FK5 sing 84 n n C1 O2 FK5 doub 85 n n C2 C3 FK5 sing 86 n n C2 N7 FK5 sing 87 n n C2 H2 FK5 sing 88 n n C3 C4 FK5 sing 89 n n C3 H31A FK5 sing 90 n n C3 H32A FK5 sing 91 n n C4 C5 FK5 sing 92 n n C4 H41 FK5 sing 93 n n C4 H42 FK5 sing 94 n n C5 C6 FK5 sing 95 n n C5 H51 FK5 sing 96 n n C5 H52 FK5 sing 97 n n C6 N7 FK5 sing 98 n n C6 H61 FK5 sing 99 n n C6 H62 FK5 sing 100 n n C8 C9 FK5 sing 101 n n C8 N7 FK5 sing 102 n n C8 O3 FK5 doub 103 n n C9 C10 FK5 sing 104 n n C9 O4 FK5 doub 105 n n C10 C11 FK5 sing 106 n n C10 O5 FK5 sing 107 n n C10 O6 FK5 sing 108 n n C11 C12 FK5 sing 109 n n C11 C35 FK5 sing 110 n n C11 H11 FK5 sing 111 n n C12 C13 FK5 sing 112 n n C12 H121 FK5 sing 113 n n C12 H122 FK5 sing 114 n n C13 C14 FK5 sing 115 n n C13 O7 FK5 sing 116 n n C13 H13 FK5 sing 117 n n C14 C15 FK5 sing 118 n n C14 O5 FK5 sing 119 n n C14 H14 FK5 sing 120 n n C15 C16 FK5 sing 121 n n C15 O8 FK5 sing 122 n n C15 H15 FK5 sing 123 n n C16 C17 FK5 sing 124 n n C16 H161 FK5 sing 125 n n C16 H162 FK5 sing 126 n n C17 C18 FK5 sing 127 n n C17 C36 FK5 sing 128 n n C17 H17 FK5 sing 129 n n C18 C19 FK5 sing 130 n n C18 H181 FK5 sing 131 n n C18 H182 FK5 sing 132 n n C19 C20 FK5 doub 133 e n C19 C37 FK5 sing 134 n n C20 C21 FK5 sing 135 n n C20 H20 FK5 sing 136 n n C21 C22 FK5 sing 137 n n C21 C38 FK5 sing 138 n n C21 H21 FK5 sing 139 n n C22 C23 FK5 sing 140 n n C22 O9 FK5 doub 141 n n C23 C24 FK5 sing 142 n n C23 H231 FK5 sing 143 n n C23 H232 FK5 sing 144 n n C24 C25 FK5 sing 145 n n C24 O10 FK5 sing 146 n n C24 H24 FK5 sing 147 n n C25 C26 FK5 sing 148 n n C25 C41 FK5 sing 149 n n C25 H25 FK5 sing 150 n n C26 C27 FK5 sing 151 n n C26 O1 FK5 sing 152 n n C26 H26 FK5 sing 153 n n C27 C28 FK5 doub 154 e n C27 C42 FK5 sing 155 n n C28 C29 FK5 sing 156 n n C28 H28 FK5 sing 157 n n C29 C30 FK5 sing 158 n n C29 C34 FK5 sing 159 n n C29 H29 FK5 sing 160 n n C30 C31 FK5 sing 161 n n C30 H301 FK5 sing 162 n n C30 H302 FK5 sing 163 n n C31 C32 FK5 sing 164 n n C31 O11 FK5 sing 165 n n C31 H31 FK5 sing 166 n n C32 C33 FK5 sing 167 n n C32 O12 FK5 sing 168 n n C32 H32 FK5 sing 169 n n C33 C34 FK5 sing 170 n n C33 H331 FK5 sing 171 n n C33 H332 FK5 sing 172 n n C34 H341 FK5 sing 173 n n C34 H342 FK5 sing 174 n n C35 H351 FK5 sing 175 n n C35 H352 FK5 sing 176 n n C35 H353 FK5 sing 177 n n C36 H361 FK5 sing 178 n n C36 H362 FK5 sing 179 n n C36 H363 FK5 sing 180 n n C37 H371 FK5 sing 181 n n C37 H372 FK5 sing 182 n n C37 H373 FK5 sing 183 n n C38 C39 FK5 sing 184 n n C38 H381 FK5 sing 185 n n C38 H382 FK5 sing 186 n n C39 C40 FK5 doub 187 n n C39 H39 FK5 sing 188 n n C40 H401 FK5 sing 189 n n C40 H402 FK5 sing 190 n n C41 H411 FK5 sing 191 n n C41 H412 FK5 sing 192 n n C41 H413 FK5 sing 193 n n C42 H421 FK5 sing 194 n n C42 H422 FK5 sing 195 n n C42 H423 FK5 sing 196 n n C43 O7 FK5 sing 197 n n C43 H431 FK5 sing 198 n n C43 H432 FK5 sing 199 n n C43 H433 FK5 sing 200 n n C44 O8 FK5 sing 201 n n C44 H441 FK5 sing 202 n n C44 H442 FK5 sing 203 n n C44 H443 FK5 sing 204 n n C45 O11 FK5 sing 205 n n C45 H451 FK5 sing 206 n n C45 H452 FK5 sing 207 n n C45 H453 FK5 sing 208 n n O6 HO6 FK5 sing 209 n n O10 HO10 FK5 sing 210 n n O12 HO12 FK5 sing 211 n n # _atom_sites.entry_id 1FKJ _atom_sites.fract_transf_matrix[1][1] 0.017212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FK5 A 1 108 108 FK5 FK5 . C 3 HOH A 1 109 109 HOH HOH . C 3 HOH A 2 110 110 HOH HOH . C 3 HOH A 3 111 111 HOH HOH . C 3 HOH A 4 112 112 HOH HOH . C 3 HOH A 5 113 113 HOH HOH . C 3 HOH A 6 114 114 HOH HOH . C 3 HOH A 7 115 115 HOH HOH . C 3 HOH A 8 116 116 HOH HOH . C 3 HOH A 9 117 117 HOH HOH . C 3 HOH A 10 118 118 HOH HOH . C 3 HOH A 11 119 119 HOH HOH . C 3 HOH A 12 120 120 HOH HOH . C 3 HOH A 13 121 121 HOH HOH . C 3 HOH A 14 122 122 HOH HOH . C 3 HOH A 15 123 123 HOH HOH . C 3 HOH A 16 124 124 HOH HOH . C 3 HOH A 17 125 125 HOH HOH . C 3 HOH A 18 126 126 HOH HOH . C 3 HOH A 19 127 127 HOH HOH . C 3 HOH A 20 128 128 HOH HOH . C 3 HOH A 21 129 129 HOH HOH . C 3 HOH A 22 130 130 HOH HOH . C 3 HOH A 23 131 131 HOH HOH . C 3 HOH A 24 132 132 HOH HOH . C 3 HOH A 25 133 133 HOH HOH . C 3 HOH A 26 134 134 HOH HOH . C 3 HOH A 27 135 135 HOH HOH . C 3 HOH A 28 136 136 HOH HOH . C 3 HOH A 29 137 137 HOH HOH . C 3 HOH A 30 138 138 HOH HOH . C 3 HOH A 31 139 139 HOH HOH . C 3 HOH A 32 140 140 HOH HOH . C 3 HOH A 33 141 141 HOH HOH . C 3 HOH A 34 142 142 HOH HOH . C 3 HOH A 35 143 143 HOH HOH . C 3 HOH A 36 144 144 HOH HOH . C 3 HOH A 37 145 145 HOH HOH . C 3 HOH A 38 146 146 HOH HOH . C 3 HOH A 39 147 147 HOH HOH . C 3 HOH A 40 148 148 HOH HOH . C 3 HOH A 41 149 149 HOH HOH . C 3 HOH A 42 150 150 HOH HOH . C 3 HOH A 43 151 151 HOH HOH . C 3 HOH A 44 152 152 HOH HOH . C 3 HOH A 45 153 153 HOH HOH . C 3 HOH A 46 154 154 HOH HOH . C 3 HOH A 47 155 155 HOH HOH . C 3 HOH A 48 156 156 HOH HOH . C 3 HOH A 49 157 157 HOH HOH . C 3 HOH A 50 158 158 HOH HOH . C 3 HOH A 51 159 159 HOH HOH . C 3 HOH A 52 160 160 HOH HOH . C 3 HOH A 53 161 161 HOH HOH . C 3 HOH A 54 162 162 HOH HOH . C 3 HOH A 55 163 163 HOH HOH . C 3 HOH A 56 164 164 HOH HOH . C 3 HOH A 57 165 165 HOH HOH . C 3 HOH A 58 166 166 HOH HOH . C 3 HOH A 59 167 167 HOH HOH . C 3 HOH A 60 168 168 HOH HOH . C 3 HOH A 61 169 169 HOH HOH . C 3 HOH A 62 170 170 HOH HOH . C 3 HOH A 63 171 171 HOH HOH . C 3 HOH A 64 172 172 HOH HOH . C 3 HOH A 65 173 173 HOH HOH . C 3 HOH A 66 174 174 HOH HOH . C 3 HOH A 67 175 175 HOH HOH . C 3 HOH A 68 176 176 HOH HOH . C 3 HOH A 69 177 177 HOH HOH . C 3 HOH A 70 178 178 HOH HOH . C 3 HOH A 71 179 179 HOH HOH . C 3 HOH A 72 180 180 HOH HOH . C 3 HOH A 73 181 181 HOH HOH . C 3 HOH A 74 182 182 HOH HOH . C 3 HOH A 75 183 183 HOH HOH . C 3 HOH A 76 184 184 HOH HOH . C 3 HOH A 77 185 185 HOH HOH . C 3 HOH A 78 186 186 HOH HOH . C 3 HOH A 79 187 187 HOH HOH . C 3 HOH A 80 188 188 HOH HOH . C 3 HOH A 81 189 189 HOH HOH . C 3 HOH A 82 190 190 HOH HOH . C 3 HOH A 83 191 191 HOH HOH . C 3 HOH A 84 192 192 HOH HOH . C 3 HOH A 85 193 193 HOH HOH . C 3 HOH A 86 194 194 HOH HOH . C 3 HOH A 87 195 195 HOH HOH . C 3 HOH A 88 196 196 HOH HOH . C 3 HOH A 89 197 197 HOH HOH . C 3 HOH A 90 198 198 HOH HOH . C 3 HOH A 91 199 199 HOH HOH . C 3 HOH A 92 200 200 HOH HOH . C 3 HOH A 93 201 201 HOH HOH . C 3 HOH A 94 202 202 HOH HOH . C 3 HOH A 95 203 203 HOH HOH . C 3 HOH A 96 204 204 HOH HOH . C 3 HOH A 97 205 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FK5 . . . B 2 19.949 28.568 21.857 1 6.98 ? C1 FK5 108 A 1 HETATM 2 C C2 FK5 . . . B 2 18.568 29.218 21.97 1 6.27 ? C2 FK5 108 A 1 HETATM 3 C C3 FK5 . . . B 2 17.964 29.385 20.574 1 6.51 ? C3 FK5 108 A 1 HETATM 4 C C4 FK5 . . . B 2 18.601 30.521 19.741 1 6.4 ? C4 FK5 108 A 1 HETATM 5 C C5 FK5 . . . B 2 18.415 31.83 20.474 1 5.73 ? C5 FK5 108 A 1 HETATM 6 C C6 FK5 . . . B 2 19.035 31.693 21.862 1 4.15 ? C6 FK5 108 A 1 HETATM 7 C C8 FK5 . . . B 2 17.851 30.621 23.859 1 5.94 ? C8 FK5 108 A 1 HETATM 8 C C9 FK5 . . . B 2 17.676 31.834 24.546 1 6.76 ? C9 FK5 108 A 1 HETATM 9 C C10 FK5 . . . B 2 18.801 32.356 25.503 1 5.82 ? C10 FK5 108 A 1 HETATM 10 C C11 FK5 . . . B 2 19.456 31.256 26.382 1 7.78 ? C11 FK5 108 A 1 HETATM 11 C C12 FK5 . . . B 2 20.815 31.75 26.99 1 9.19 ? C12 FK5 108 A 1 HETATM 12 C C13 FK5 . . . B 2 21.717 32.449 25.922 1 9.1 ? C13 FK5 108 A 1 HETATM 13 C C14 FK5 . . . B 2 20.92 33.571 25.237 1 9.26 ? C14 FK5 108 A 1 HETATM 14 C C15 FK5 . . . B 2 21.593 34.502 24.165 1 8.63 ? C15 FK5 108 A 1 HETATM 15 C C16 FK5 . . . B 2 22.372 33.745 23.045 1 8.27 ? C16 FK5 108 A 1 HETATM 16 C C17 FK5 . . . B 2 22.953 34.547 21.834 1 9.32 ? C17 FK5 108 A 1 HETATM 17 C C18 FK5 . . . B 2 24.421 35.099 22.062 1 9.14 ? C18 FK5 108 A 1 HETATM 18 C C19 FK5 . . . B 2 25.46 33.954 21.902 1 9.94 ? C19 FK5 108 A 1 HETATM 19 C C20 FK5 . . . B 2 25.966 33.352 23.026 1 9.31 ? C20 FK5 108 A 1 HETATM 20 C C21 FK5 . . . B 2 27.014 32.209 23.143 1 10.82 ? C21 FK5 108 A 1 HETATM 21 C C22 FK5 . . . B 2 26.232 30.858 23.278 1 10.37 ? C22 FK5 108 A 1 HETATM 22 C C23 FK5 . . . B 2 26.069 30.036 21.976 1 10.41 ? C23 FK5 108 A 1 HETATM 23 C C24 FK5 . . . B 2 24.856 29.092 22.033 1 9.24 ? C24 FK5 108 A 1 HETATM 24 C C25 FK5 . . . B 2 23.44 29.778 22.123 1 8.06 ? C25 FK5 108 A 1 HETATM 25 C C26 FK5 . . . B 2 22.356 28.681 22.369 1 7.84 ? C26 FK5 108 A 1 HETATM 26 C C27 FK5 . . . B 2 22.556 27.857 23.672 1 10.03 ? C27 FK5 108 A 1 HETATM 27 C C28 FK5 . . . B 2 22.729 26.52 23.525 1 10.4 ? C28 FK5 108 A 1 HETATM 28 C C29 FK5 . . . B 2 23.355 25.568 24.559 1 13.26 ? C29 FK5 108 A 1 HETATM 29 C C30 FK5 . . . B 2 22.523 24.253 24.438 1 13.98 ? C30 FK5 108 A 1 HETATM 30 C C31 FK5 . . . B 2 23.13 23.136 25.286 1 14.91 ? C31 FK5 108 A 1 HETATM 31 C C32 FK5 . . . B 2 24.607 22.941 24.866 1 15.37 ? C32 FK5 108 A 1 HETATM 32 C C33 FK5 . . . B 2 25.466 24.221 25.017 1 14.96 ? C33 FK5 108 A 1 HETATM 33 C C34 FK5 . . . B 2 24.853 25.37 24.176 1 13.98 ? C34 FK5 108 A 1 HETATM 34 C C35 FK5 . . . B 2 18.475 30.707 27.445 1 6.91 ? C35 FK5 108 A 1 HETATM 35 C C36 FK5 . . . B 2 22.005 35.668 21.322 1 9.15 ? C36 FK5 108 A 1 HETATM 36 C C37 FK5 . . . B 2 25.928 33.684 20.437 1 10.56 ? C37 FK5 108 A 1 HETATM 37 C C38 FK5 . . . B 2 27.922 32.514 24.417 1 11.18 ? C38 FK5 108 A 1 HETATM 38 C C39 FK5 . . . B 2 28.894 31.377 24.743 1 14.89 ? C39 FK5 108 A 1 HETATM 39 C C40 FK5 . . . B 2 29.736 30.826 23.846 1 14.73 ? C40 FK5 108 A 1 HETATM 40 C C41 FK5 . . . B 2 23.047 30.603 20.842 1 7.88 ? C41 FK5 108 A 1 HETATM 41 C C42 FK5 . . . B 2 22.464 28.537 25.044 1 6.75 ? C42 FK5 108 A 1 HETATM 42 C C43 FK5 . . . B 2 24.07 32.136 26.629 1 13.04 ? C43 FK5 108 A 1 HETATM 43 C C44 FK5 . . . B 2 21.81 36.765 25.21 1 8.77 ? C44 FK5 108 A 1 HETATM 44 C C45 FK5 . . . B 2 21.434 21.447 25.907 1 15.72 ? C45 FK5 108 A 1 HETATM 45 N N7 FK5 . . . B 2 18.444 30.544 22.615 1 5.19 ? N7 FK5 108 A 1 HETATM 46 O O1 FK5 . . . B 2 21.027 29.295 22.381 1 8.14 ? O1 FK5 108 A 1 HETATM 47 O O2 FK5 . . . B 2 20.133 27.538 21.287 1 8.71 ? O2 FK5 108 A 1 HETATM 48 O O3 FK5 . . . B 2 17.438 29.618 24.457 1 6.75 ? O3 FK5 108 A 1 HETATM 49 O O4 FK5 . . . B 2 16.721 32.566 24.306 1 6.94 ? O4 FK5 108 A 1 HETATM 50 O O5 FK5 . . . B 2 19.784 32.946 24.608 1 8.22 ? O5 FK5 108 A 1 HETATM 51 O O6 FK5 . . . B 2 18.277 33.391 26.367 1 5.34 ? O6 FK5 108 A 1 HETATM 52 O O7 FK5 . . . B 2 22.924 33.019 26.551 1 10.93 ? O7 FK5 108 A 1 HETATM 53 O O8 FK5 . . . B 2 22.457 35.505 24.791 1 10.18 ? O8 FK5 108 A 1 HETATM 54 O O9 FK5 . . . B 2 25.973 30.364 24.376 1 9.44 ? O9 FK5 108 A 1 HETATM 55 O O10 FK5 . . . B 2 24.91 28.163 20.936 1 12.91 ? O10 FK5 108 A 1 HETATM 56 O O11 FK5 . . . B 2 22.382 21.937 24.951 1 14.51 ? O11 FK5 108 A 1 HETATM 57 O O12 FK5 . . . B 2 25.184 21.863 25.625 1 18.43 ? O12 FK5 108 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 57 #