data_1FKO # _model_server_result.job_id YFL1kf67xUb7BDw6r9XFeg _model_server_result.datetime_utc '2024-11-24 20:18:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":999}' # _entry.id 1FKO # _exptl.entry_id 1FKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 315.675 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FKO _cell.length_a 140.3 _cell.length_b 109.7 _cell.length_c 74.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 279 A LEU 279 1_555 A N CSD 280 A CSD 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 280 A CSD 280 1_555 A N LYS 281 A LYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? # _chem_comp.formula 'C14 H9 Cl F3 N O2' _chem_comp.formula_weight 315.675 _chem_comp.id EFZ _chem_comp.mon_nstd_flag . _chem_comp.name (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DMP-266;Efavirenz # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C4 EFZ sing 98 n n F1 C13 EFZ sing 99 n n F2 C13 EFZ sing 100 n n F3 C13 EFZ sing 101 n n O1 C14 EFZ doub 102 n n O2 C7 EFZ sing 103 n n O2 C14 EFZ sing 104 n n N C1 EFZ sing 105 n n N C14 EFZ sing 106 n n N HN EFZ sing 107 n n C1 C2 EFZ doub 108 n y C1 C6 EFZ sing 109 n y C2 C3 EFZ sing 110 n y C2 H2 EFZ sing 111 n n C3 C4 EFZ doub 112 n y C3 H3 EFZ sing 113 n n C4 C5 EFZ sing 114 n y C5 C6 EFZ doub 115 n y C5 H5 EFZ sing 116 n n C6 C7 EFZ sing 117 n n C7 C8 EFZ sing 118 n n C7 C13 EFZ sing 119 n n C8 C9 EFZ trip 120 n n C9 C10 EFZ sing 121 n n C10 C11 EFZ sing 122 n n C10 C12 EFZ sing 123 n n C10 H101 EFZ sing 124 n n C11 C12 EFZ sing 125 n n C11 H111 EFZ sing 126 n n C11 H112 EFZ sing 127 n n C12 H121 EFZ sing 128 n n C12 H122 EFZ sing 129 n n # _atom_sites.entry_id 1FKO _atom_sites.fract_transf_matrix[1][1] 0.007128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009116 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id EFZ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 999 _pdbx_nonpoly_scheme.auth_seq_num 999 _pdbx_nonpoly_scheme.pdb_mon_id EFZ _pdbx_nonpoly_scheme.auth_mon_id DMP _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL EFZ . . . C 3 -4.685 -32.725 25.222 1 50.93 ? CL EFZ 999 A 1 HETATM 2 F F1 EFZ . . . C 3 -0.755 -36.632 25.697 1 62.8 ? F1 EFZ 999 A 1 HETATM 3 F F2 EFZ . . . C 3 1.078 -37.043 24.672 1 70.73 ? F2 EFZ 999 A 1 HETATM 4 F F3 EFZ . . . C 3 -0.784 -37.177 23.626 1 75.12 ? F3 EFZ 999 A 1 HETATM 5 O O1 EFZ . . . C 3 1.524 -34.934 20.91 1 73.73 ? O1 EFZ 999 A 1 HETATM 6 O O2 EFZ . . . C 3 0.989 -34.88 23.058 1 73.24 ? O2 EFZ 999 A 1 HETATM 7 N N EFZ . . . C 3 -0.681 -34.971 21.434 1 71.12 ? N EFZ 999 A 1 HETATM 8 C C1 EFZ . . . C 3 -1.662 -34.414 22.313 1 71.29 ? C1 EFZ 999 A 1 HETATM 9 C C2 EFZ . . . C 3 -2.915 -33.947 21.843 1 72.17 ? C2 EFZ 999 A 1 HETATM 10 C C3 EFZ . . . C 3 -3.838 -33.423 22.771 1 71.25 ? C3 EFZ 999 A 1 HETATM 11 C C4 EFZ . . . C 3 -3.533 -33.373 24.119 1 63.88 ? C4 EFZ 999 A 1 HETATM 12 C C5 EFZ . . . C 3 -2.31 -33.829 24.593 1 63.4 ? C5 EFZ 999 A 1 HETATM 13 C C6 EFZ . . . C 3 -1.386 -34.378 23.681 1 68.96 ? C6 EFZ 999 A 1 HETATM 14 C C7 EFZ . . . C 3 -0.002 -34.957 24.144 1 71.35 ? C7 EFZ 999 A 1 HETATM 15 C C8 EFZ . . . C 3 0.552 -34.236 25.315 1 75.97 ? C8 EFZ 999 A 1 HETATM 16 C C9 EFZ . . . C 3 0.985 -33.657 26.241 1 81.31 ? C9 EFZ 999 A 1 HETATM 17 C C10 EFZ . . . C 3 1.605 -32.802 27.586 1 80.51 ? C10 EFZ 999 A 1 HETATM 18 C C11 EFZ . . . C 3 2.808 -33.083 27.639 1 83.59 ? C11 EFZ 999 A 1 HETATM 19 C C12 EFZ . . . C 3 2.404 -31.98 27.123 1 79.58 ? C12 EFZ 999 A 1 HETATM 20 C C13 EFZ . . . C 3 -0.121 -36.472 24.539 1 72.76 ? C13 EFZ 999 A 1 HETATM 21 C C14 EFZ . . . C 3 0.665 -34.932 21.725 1 70.58 ? C14 EFZ 999 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #