data_1FLV # _model_server_result.job_id A0qRXqvGEKfL-EY8XyFVtQ _model_server_result.datetime_utc '2024-12-27 03:08:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1flv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":170}' # _entry.id 1FLV # _exptl.entry_id 1FLV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92 _cell.angle_gamma 90 _cell.entry_id 1FLV _cell.length_a 48 _cell.length_b 32 _cell.length_c 51.6 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FLV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 1FLV _atom_sites.fract_transf_matrix[1][1] 0.020833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000728 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.03125 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 170 170 FMN FMN . C 3 HOH A 1 201 201 HOH HOH . C 3 HOH A 2 202 202 HOH HOH . C 3 HOH A 3 203 203 HOH HOH . C 3 HOH A 4 204 204 HOH HOH . C 3 HOH A 5 205 205 HOH HOH . C 3 HOH A 6 206 206 HOH HOH . C 3 HOH A 7 207 207 HOH HOH . C 3 HOH A 8 208 208 HOH HOH . C 3 HOH A 9 209 209 HOH HOH . C 3 HOH A 10 210 210 HOH HOH . C 3 HOH A 11 211 211 HOH HOH . C 3 HOH A 12 212 212 HOH HOH . C 3 HOH A 13 213 213 HOH HOH . C 3 HOH A 14 214 214 HOH HOH . C 3 HOH A 15 215 215 HOH HOH . C 3 HOH A 16 216 216 HOH HOH . C 3 HOH A 17 217 217 HOH HOH . C 3 HOH A 18 218 218 HOH HOH . C 3 HOH A 19 219 219 HOH HOH . C 3 HOH A 20 220 220 HOH HOH . C 3 HOH A 21 221 221 HOH HOH . C 3 HOH A 22 222 222 HOH HOH . C 3 HOH A 23 223 223 HOH HOH . C 3 HOH A 24 224 224 HOH HOH . C 3 HOH A 25 225 225 HOH HOH . C 3 HOH A 26 226 226 HOH HOH . C 3 HOH A 27 227 227 HOH HOH . C 3 HOH A 28 228 228 HOH HOH . C 3 HOH A 29 229 229 HOH HOH . C 3 HOH A 30 230 230 HOH HOH . C 3 HOH A 31 231 231 HOH HOH . C 3 HOH A 32 232 232 HOH HOH . C 3 HOH A 33 233 233 HOH HOH . C 3 HOH A 34 234 234 HOH HOH . C 3 HOH A 35 235 235 HOH HOH . C 3 HOH A 36 236 236 HOH HOH . C 3 HOH A 37 237 237 HOH HOH . C 3 HOH A 38 238 238 HOH HOH . C 3 HOH A 39 239 239 HOH HOH . C 3 HOH A 40 240 240 HOH HOH . C 3 HOH A 41 241 241 HOH HOH . C 3 HOH A 42 242 242 HOH HOH . C 3 HOH A 43 243 243 HOH HOH . C 3 HOH A 44 244 244 HOH HOH . C 3 HOH A 45 245 245 HOH HOH . C 3 HOH A 46 246 246 HOH HOH . C 3 HOH A 47 247 247 HOH HOH . C 3 HOH A 48 248 248 HOH HOH . C 3 HOH A 49 249 249 HOH HOH . C 3 HOH A 50 250 250 HOH HOH . C 3 HOH A 51 251 251 HOH HOH . C 3 HOH A 52 252 252 HOH HOH . C 3 HOH A 53 253 253 HOH HOH . C 3 HOH A 54 254 254 HOH HOH . C 3 HOH A 55 255 255 HOH HOH . C 3 HOH A 56 256 256 HOH HOH . C 3 HOH A 57 257 257 HOH HOH . C 3 HOH A 58 258 258 HOH HOH . C 3 HOH A 59 259 259 HOH HOH . C 3 HOH A 60 260 260 HOH HOH . C 3 HOH A 61 261 261 HOH HOH . C 3 HOH A 62 262 262 HOH HOH . C 3 HOH A 63 263 263 HOH HOH . C 3 HOH A 64 264 264 HOH HOH . C 3 HOH A 65 265 265 HOH HOH . C 3 HOH A 66 266 266 HOH HOH . C 3 HOH A 67 267 267 HOH HOH . C 3 HOH A 68 268 268 HOH HOH . C 3 HOH A 69 269 269 HOH HOH . C 3 HOH A 70 270 270 HOH HOH . C 3 HOH A 71 271 271 HOH HOH . C 3 HOH A 72 272 272 HOH HOH . C 3 HOH A 73 273 273 HOH HOH . C 3 HOH A 74 274 274 HOH HOH . C 3 HOH A 75 275 275 HOH HOH . C 3 HOH A 76 276 276 HOH HOH . C 3 HOH A 77 277 277 HOH HOH . C 3 HOH A 78 278 278 HOH HOH . C 3 HOH A 79 279 279 HOH HOH . C 3 HOH A 80 280 280 HOH HOH . C 3 HOH A 81 281 281 HOH HOH . C 3 HOH A 82 282 282 HOH HOH . C 3 HOH A 83 283 283 HOH HOH . C 3 HOH A 84 284 284 HOH HOH . C 3 HOH A 85 285 285 HOH HOH . C 3 HOH A 86 286 286 HOH HOH . C 3 HOH A 87 287 287 HOH HOH . C 3 HOH A 88 288 288 HOH HOH . C 3 HOH A 89 289 289 HOH HOH . C 3 HOH A 90 290 290 HOH HOH . C 3 HOH A 91 291 291 HOH HOH . C 3 HOH A 92 292 292 HOH HOH . C 3 HOH A 93 293 293 HOH HOH . C 3 HOH A 94 294 294 HOH HOH . C 3 HOH A 95 295 295 HOH HOH . C 3 HOH A 96 296 296 HOH HOH . C 3 HOH A 97 297 297 HOH HOH . C 3 HOH A 98 298 298 HOH HOH . C 3 HOH A 99 299 299 HOH HOH . C 3 HOH A 100 300 300 HOH HOH . C 3 HOH A 101 301 301 HOH HOH . C 3 HOH A 102 302 302 HOH HOH . C 3 HOH A 103 303 303 HOH HOH . C 3 HOH A 104 304 304 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 17.131 7.277 2.489 1 2.79 ? N1 FMN 170 A 1 HETATM 2 C C2 FMN . . . B 2 17.699 6.054 2.587 1 3.35 ? C2 FMN 170 A 1 HETATM 3 O O2 FMN . . . B 2 17.059 5.007 2.52 1 4.65 ? O2 FMN 170 A 1 HETATM 4 N N3 FMN . . . B 2 19.079 6.035 2.807 1 4.05 ? N3 FMN 170 A 1 HETATM 5 C C4 FMN . . . B 2 19.917 7.146 3.123 1 3.2 ? C4 FMN 170 A 1 HETATM 6 O O4 FMN . . . B 2 21.126 6.998 3.312 1 3.21 ? O4 FMN 170 A 1 HETATM 7 C C4A FMN . . . B 2 19.207 8.381 3.13 1 2.75 ? C4A FMN 170 A 1 HETATM 8 N N5 FMN . . . B 2 19.776 9.623 3.311 1 2 ? N5 FMN 170 A 1 HETATM 9 C C5A FMN . . . B 2 19.267 10.89 3.101 1 3.28 ? C5A FMN 170 A 1 HETATM 10 C C6 FMN . . . B 2 20.099 12.08 3.214 1 2.82 ? C6 FMN 170 A 1 HETATM 11 C C7 FMN . . . B 2 19.498 13.372 2.977 1 3.38 ? C7 FMN 170 A 1 HETATM 12 C C7M FMN . . . B 2 20.44 14.592 2.856 1 2.73 ? C7M FMN 170 A 1 HETATM 13 C C8 FMN . . . B 2 18.041 13.442 2.775 1 3.48 ? C8 FMN 170 A 1 HETATM 14 C C8M FMN . . . B 2 17.275 14.711 2.267 1 3.28 ? C8M FMN 170 A 1 HETATM 15 C C9 FMN . . . B 2 17.291 12.21 2.843 1 3.29 ? C9 FMN 170 A 1 HETATM 16 C C9A FMN . . . B 2 17.934 10.939 2.792 1 2.48 ? C9A FMN 170 A 1 HETATM 17 N N10 FMN . . . B 2 17.292 9.706 2.784 1 3.45 ? N10 FMN 170 A 1 HETATM 18 C C10 FMN . . . B 2 17.864 8.405 2.752 1 3 ? C10 FMN 170 A 1 HETATM 19 C C1' FMN . . . B 2 15.792 9.729 2.625 1 2.82 ? C1' FMN 170 A 1 HETATM 20 C C2' FMN . . . B 2 15.031 9.908 3.935 1 2.92 ? C2' FMN 170 A 1 HETATM 21 O O2' FMN . . . B 2 15.112 8.771 4.789 1 2.87 ? O2' FMN 170 A 1 HETATM 22 C C3' FMN . . . B 2 13.539 10.147 3.638 1 3.29 ? C3' FMN 170 A 1 HETATM 23 O O3' FMN . . . B 2 13.296 11.316 2.853 1 2.83 ? O3' FMN 170 A 1 HETATM 24 C C4' FMN . . . B 2 12.6 9.934 4.867 1 3.66 ? C4' FMN 170 A 1 HETATM 25 O O4' FMN . . . B 2 11.215 9.849 4.56 1 3.78 ? O4' FMN 170 A 1 HETATM 26 C C5' FMN . . . B 2 12.734 10.994 5.947 1 4.03 ? C5' FMN 170 A 1 HETATM 27 O O5' FMN . . . B 2 11.909 10.661 7.039 1 5.14 ? O5' FMN 170 A 1 HETATM 28 P P FMN . . . B 2 11.608 11.624 8.248 1 4.59 ? P FMN 170 A 1 HETATM 29 O O1P FMN . . . B 2 10.807 10.79 9.154 1 5.09 ? O1P FMN 170 A 1 HETATM 30 O O2P FMN . . . B 2 10.869 12.764 7.681 1 5.88 ? O2P FMN 170 A 1 HETATM 31 O O3P FMN . . . B 2 12.954 12.006 8.738 1 7.5 ? O3P FMN 170 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #