data_1FM4 # _model_server_result.job_id 2ncPa6qIGafORJzvKVnycg _model_server_result.datetime_utc '2024-11-27 18:12:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fm4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1FM4 # _exptl.entry_id 1FM4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.572 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.94 _cell.angle_gamma 90 _cell.entry_id 1FM4 _cell.length_a 33.13 _cell.length_b 57.23 _cell.length_c 38.65 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FM4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C24 H40 O4' _chem_comp.formula_weight 392.572 _chem_comp.id DXC _chem_comp.mon_nstd_flag . _chem_comp.name '(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'DEOXYCHOLIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DXC sing 83 n n C1 C6 DXC sing 84 n n C1 O2 DXC sing 85 n n C1 H1 DXC sing 86 n n C2 C3 DXC sing 87 n n C2 H22 DXC sing 88 n n C2 H21 DXC sing 89 n n C3 C4 DXC sing 90 n n C3 C7 DXC sing 91 n n C3 H3 DXC sing 92 n n C4 C5 DXC sing 93 n n C4 C10 DXC sing 94 n n C4 C18 DXC sing 95 n n C5 C6 DXC sing 96 n n C5 H52 DXC sing 97 n n C5 H51 DXC sing 98 n n C6 H62 DXC sing 99 n n C6 H61 DXC sing 100 n n C7 C8 DXC sing 101 n n C7 H72 DXC sing 102 n n C7 H71 DXC sing 103 n n C8 C9 DXC sing 104 n n C8 H82 DXC sing 105 n n C8 H81 DXC sing 106 n n C9 C10 DXC sing 107 n n C9 C11 DXC sing 108 n n C9 H9 DXC sing 109 n n C10 C14 DXC sing 110 n n C10 H10 DXC sing 111 n n C11 C12 DXC sing 112 n n C11 C15 DXC sing 113 n n C11 H11 DXC sing 114 n n C12 C13 DXC sing 115 n n C12 C17 DXC sing 116 n n C12 C20 DXC sing 117 n n C13 C14 DXC sing 118 n n C13 O1 DXC sing 119 n n C13 H13 DXC sing 120 n n C14 H142 DXC sing 121 n n C14 H141 DXC sing 122 n n C15 C16 DXC sing 123 n n C15 H152 DXC sing 124 n n C15 H151 DXC sing 125 n n C16 C17 DXC sing 126 n n C16 H162 DXC sing 127 n n C16 H161 DXC sing 128 n n C17 C19 DXC sing 129 n n C17 H17 DXC sing 130 n n C18 H183 DXC sing 131 n n C18 H182 DXC sing 132 n n C18 H181 DXC sing 133 n n C19 C21 DXC sing 134 n n C19 C24 DXC sing 135 n n C19 H19 DXC sing 136 n n O1 H1O1 DXC sing 137 n n O2 H2 DXC sing 138 n n C20 H203 DXC sing 139 n n C20 H202 DXC sing 140 n n C20 H201 DXC sing 141 n n C21 C22 DXC sing 142 n n C21 H212 DXC sing 143 n n C21 H211 DXC sing 144 n n C22 C23 DXC sing 145 n n C22 H222 DXC sing 146 n n C22 H221 DXC sing 147 n n C23 O3 DXC doub 148 n n C23 O4 DXC sing 149 n n O4 HO4 DXC sing 150 n n C24 H243 DXC sing 151 n n C24 H242 DXC sing 152 n n C24 H241 DXC sing 153 n n # _atom_sites.entry_id 1FM4 _atom_sites.fract_transf_matrix[1][1] 0.030184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025888 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DXC A 1 1001 1 DXC CHO . C 2 DXC A 1 1002 2 DXC CHO . D 3 HOH A 1 1003 1 HOH HOH . D 3 HOH A 2 1004 2 HOH HOH . D 3 HOH A 3 1005 3 HOH HOH . D 3 HOH A 4 1006 4 HOH HOH . D 3 HOH A 5 1007 5 HOH HOH . D 3 HOH A 6 1008 6 HOH HOH . D 3 HOH A 7 1009 7 HOH HOH . D 3 HOH A 8 1010 8 HOH HOH . D 3 HOH A 9 1011 9 HOH HOH . D 3 HOH A 10 1012 10 HOH HOH . D 3 HOH A 11 1013 11 HOH HOH . D 3 HOH A 12 1014 12 HOH HOH . D 3 HOH A 13 1015 13 HOH HOH . D 3 HOH A 14 1016 14 HOH HOH . D 3 HOH A 15 1017 15 HOH HOH . D 3 HOH A 16 1018 16 HOH HOH . D 3 HOH A 17 1019 17 HOH HOH . D 3 HOH A 18 1020 18 HOH HOH . D 3 HOH A 19 1021 19 HOH HOH . D 3 HOH A 20 1022 20 HOH HOH . D 3 HOH A 21 1023 21 HOH HOH . D 3 HOH A 22 1024 22 HOH HOH . D 3 HOH A 23 1025 23 HOH HOH . D 3 HOH A 24 1026 24 HOH HOH . D 3 HOH A 25 1027 25 HOH HOH . D 3 HOH A 26 1028 26 HOH HOH . D 3 HOH A 27 1029 27 HOH HOH . D 3 HOH A 28 1030 28 HOH HOH . D 3 HOH A 29 1031 29 HOH HOH . D 3 HOH A 30 1032 30 HOH HOH . D 3 HOH A 31 1033 31 HOH HOH . D 3 HOH A 32 1034 32 HOH HOH . D 3 HOH A 33 1035 33 HOH HOH . D 3 HOH A 34 1036 34 HOH HOH . D 3 HOH A 35 1037 35 HOH HOH . D 3 HOH A 36 1038 36 HOH HOH . D 3 HOH A 37 1039 37 HOH HOH . D 3 HOH A 38 1040 38 HOH HOH . D 3 HOH A 39 1041 39 HOH HOH . D 3 HOH A 40 1042 40 HOH HOH . D 3 HOH A 41 1043 41 HOH HOH . D 3 HOH A 42 1044 42 HOH HOH . D 3 HOH A 43 1045 43 HOH HOH . D 3 HOH A 44 1046 44 HOH HOH . D 3 HOH A 45 1047 45 HOH HOH . D 3 HOH A 46 1048 46 HOH HOH . D 3 HOH A 47 1049 47 HOH HOH . D 3 HOH A 48 1050 48 HOH HOH . D 3 HOH A 49 1051 49 HOH HOH . D 3 HOH A 50 1052 50 HOH HOH . D 3 HOH A 51 1053 51 HOH HOH . D 3 HOH A 52 1054 52 HOH HOH . D 3 HOH A 53 1055 53 HOH HOH . D 3 HOH A 54 1056 54 HOH HOH . D 3 HOH A 55 1057 55 HOH HOH . D 3 HOH A 56 1058 56 HOH HOH . D 3 HOH A 57 1059 57 HOH HOH . D 3 HOH A 58 1060 58 HOH HOH . D 3 HOH A 59 1061 59 HOH HOH . D 3 HOH A 60 1062 60 HOH HOH . D 3 HOH A 61 1063 61 HOH HOH . D 3 HOH A 62 1064 62 HOH HOH . D 3 HOH A 63 1065 63 HOH HOH . D 3 HOH A 64 1066 64 HOH HOH . D 3 HOH A 65 1067 65 HOH HOH . D 3 HOH A 66 1068 66 HOH HOH . D 3 HOH A 67 1069 67 HOH HOH . D 3 HOH A 68 1070 68 HOH HOH . D 3 HOH A 69 1071 69 HOH HOH . D 3 HOH A 70 1072 70 HOH HOH . D 3 HOH A 71 1073 71 HOH HOH . D 3 HOH A 72 1074 72 HOH HOH . D 3 HOH A 73 1075 73 HOH HOH . D 3 HOH A 74 1076 74 HOH HOH . D 3 HOH A 75 1077 75 HOH HOH . D 3 HOH A 76 1078 76 HOH HOH . D 3 HOH A 77 1079 77 HOH HOH . D 3 HOH A 78 1080 78 HOH HOH . D 3 HOH A 79 1081 79 HOH HOH . D 3 HOH A 80 1082 80 HOH HOH . D 3 HOH A 81 1083 81 HOH HOH . D 3 HOH A 82 1084 82 HOH HOH . D 3 HOH A 83 1085 83 HOH HOH . D 3 HOH A 84 1086 84 HOH HOH . D 3 HOH A 85 1087 85 HOH HOH . D 3 HOH A 86 1088 86 HOH HOH . D 3 HOH A 87 1089 87 HOH HOH . D 3 HOH A 88 1090 88 HOH HOH . D 3 HOH A 89 1091 89 HOH HOH . D 3 HOH A 90 1092 90 HOH HOH . D 3 HOH A 91 1093 91 HOH HOH . D 3 HOH A 92 1094 92 HOH HOH . D 3 HOH A 93 1095 93 HOH HOH . D 3 HOH A 94 1096 94 HOH HOH . D 3 HOH A 95 1097 95 HOH HOH . D 3 HOH A 96 1098 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DXC . . . B 2 10.317 5.256 22.236 1 13.06 ? C1 DXC 1001 A 1 HETATM 2 C C2 DXC . . . B 2 9.957 3.83 21.807 1 10.9 ? C2 DXC 1001 A 1 HETATM 3 C C3 DXC . . . B 2 9.516 3.813 20.275 1 11.17 ? C3 DXC 1001 A 1 HETATM 4 C C4 DXC . . . B 2 8.277 4.791 20.042 1 11.91 ? C4 DXC 1001 A 1 HETATM 5 C C5 DXC . . . B 2 8.658 6.156 20.568 1 12.51 ? C5 DXC 1001 A 1 HETATM 6 C C6 DXC . . . B 2 9.037 6.216 22.043 1 13.04 ? C6 DXC 1001 A 1 HETATM 7 C C7 DXC . . . B 2 9.184 2.392 19.755 1 10.92 ? C7 DXC 1001 A 1 HETATM 8 C C8 DXC . . . B 2 7.917 1.82 20.475 1 11.39 ? C8 DXC 1001 A 1 HETATM 9 C C9 DXC . . . B 2 6.645 2.724 20.241 1 12.88 ? C9 DXC 1001 A 1 HETATM 10 C C10 DXC . . . B 2 6.979 4.168 20.805 1 10.16 ? C10 DXC 1001 A 1 HETATM 11 C C11 DXC . . . B 2 5.418 2.186 20.949 1 14.18 ? C11 DXC 1001 A 1 HETATM 12 C C12 DXC . . . B 2 4.12 3.078 20.758 1 14.93 ? C12 DXC 1001 A 1 HETATM 13 C C13 DXC . . . B 2 4.474 4.493 21.339 1 13.09 ? C13 DXC 1001 A 1 HETATM 14 C C14 DXC . . . B 2 5.722 5.086 20.61 1 12.14 ? C14 DXC 1001 A 1 HETATM 15 C C15 DXC . . . B 2 4.945 0.759 20.552 1 15.04 ? C15 DXC 1001 A 1 HETATM 16 C C16 DXC . . . B 2 3.466 0.739 21.026 1 16.49 ? C16 DXC 1001 A 1 HETATM 17 C C17 DXC . . . B 2 3.131 2.193 21.526 1 17.09 ? C17 DXC 1001 A 1 HETATM 18 C C18 DXC . . . B 2 7.955 4.919 18.521 1 14.65 ? C18 DXC 1001 A 1 HETATM 19 C C19 DXC . . . B 2 1.592 2.566 21.433 1 18.14 ? C19 DXC 1001 A 1 HETATM 20 O O1 DXC . . . B 2 4.737 4.367 22.732 1 13.18 ? O1 DXC 1001 A 1 HETATM 21 O O2 DXC . . . B 2 10.715 5.26 23.602 1 15.92 ? O2 DXC 1001 A 1 HETATM 22 C C20 DXC . . . B 2 3.787 3.163 19.184 1 12.3 ? C20 DXC 1001 A 1 HETATM 23 C C21 DXC . . . B 2 0.755 1.551 22.296 1 22.45 ? C21 DXC 1001 A 1 HETATM 24 C C22 DXC . . . B 2 0.953 1.628 23.808 1 27.75 ? C22 DXC 1001 A 1 HETATM 25 C C23 DXC . . . B 2 -0.001 0.791 24.54 1 32.31 ? C23 DXC 1001 A 1 HETATM 26 O O3 DXC . . . B 2 -0.976 0.21 24.008 1 31.88 ? O3 DXC 1001 A 1 HETATM 27 O O4 DXC . . . B 2 0.191 0.666 25.777 1 36 ? O4 DXC 1001 A 1 HETATM 28 C C24 DXC . . . B 2 1.156 3.938 21.761 1 17.3 ? C24 DXC 1001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #