data_1FMG # _model_server_result.job_id AuBksZlA9ZtiAmzsuJpKWA _model_server_result.datetime_utc '2024-11-14 23:07:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fmg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":439}' # _entry.id 1FMG # _exptl.entry_id 1FMG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FMG _cell.length_a 77.947 _cell.length_b 54.155 _cell.length_c 47.274 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? covale ? covale1 A OG1 THR 80 A THR 98 1_555 G O1 EDO . A EDO 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale2 A CB SER 144 A SER 164 3_645 D O1 EDO . A EDO 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.544 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 B CA CA . A CA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 B CA CA . A CA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 B CA CA . A CA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc4 A OE1 GLU 59 A GLU 77 1_555 B CA CA . A CA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc5 A OE1 GLU 62 A GLU 80 1_555 B CA CA . A CA 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc6 B CA CA . A CA 433 1_555 I O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 1FMG _atom_sites.fract_transf_matrix[1][1] 0.012829 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021153 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 433 433 CA CA . C 3 SO4 A 1 434 434 SO4 SO4 . D 4 EDO A 1 435 435 EDO GYC . E 4 EDO A 1 436 436 EDO GYC . F 4 EDO A 1 437 437 EDO GYC . G 4 EDO A 1 438 438 EDO GYC . H 4 EDO A 1 439 439 EDO GYC . I 5 HOH A 1 440 224 HOH HOH A I 5 HOH A 2 441 225 HOH HOH A I 5 HOH A 3 442 226 HOH HOH A I 5 HOH A 4 443 227 HOH HOH A I 5 HOH A 5 444 228 HOH HOH A I 5 HOH A 6 445 229 HOH HOH A I 5 HOH A 7 446 230 HOH HOH A I 5 HOH A 8 447 231 HOH HOH A I 5 HOH A 9 448 233 HOH HOH A I 5 HOH A 10 449 234 HOH HOH A I 5 HOH A 11 450 236 HOH HOH A I 5 HOH A 12 451 237 HOH HOH A I 5 HOH A 13 452 238 HOH HOH A I 5 HOH A 14 453 239 HOH HOH A I 5 HOH A 15 454 240 HOH HOH A I 5 HOH A 16 455 241 HOH HOH A I 5 HOH A 17 456 242 HOH HOH A I 5 HOH A 18 457 243 HOH HOH A I 5 HOH A 19 458 244 HOH HOH A I 5 HOH A 20 459 245 HOH HOH A I 5 HOH A 21 460 246 HOH HOH . I 5 HOH A 22 461 247 HOH HOH . I 5 HOH A 23 462 248 HOH HOH . I 5 HOH A 24 463 249 HOH HOH . I 5 HOH A 25 464 251 HOH HOH . I 5 HOH A 26 465 252 HOH HOH . I 5 HOH A 27 466 253 HOH HOH . I 5 HOH A 28 467 254 HOH HOH . I 5 HOH A 29 468 255 HOH HOH . I 5 HOH A 30 469 256 HOH HOH . I 5 HOH A 31 470 257 HOH HOH . I 5 HOH A 32 471 258 HOH HOH . I 5 HOH A 33 472 259 HOH HOH . I 5 HOH A 34 473 260 HOH HOH . I 5 HOH A 35 474 261 HOH HOH . I 5 HOH A 36 475 262 HOH HOH . I 5 HOH A 37 476 264 HOH HOH . I 5 HOH A 38 477 265 HOH HOH . I 5 HOH A 39 478 266 HOH HOH . I 5 HOH A 40 479 268 HOH HOH . I 5 HOH A 41 480 269 HOH HOH . I 5 HOH A 42 481 270 HOH HOH . I 5 HOH A 43 482 271 HOH HOH . I 5 HOH A 44 483 272 HOH HOH . I 5 HOH A 45 484 273 HOH HOH . I 5 HOH A 46 485 274 HOH HOH . I 5 HOH A 47 486 275 HOH HOH . I 5 HOH A 48 487 276 HOH HOH . I 5 HOH A 49 488 277 HOH HOH . I 5 HOH A 50 489 278 HOH HOH . I 5 HOH A 51 490 279 HOH HOH . I 5 HOH A 52 491 280 HOH HOH . I 5 HOH A 53 492 281 HOH HOH . I 5 HOH A 54 493 282 HOH HOH . I 5 HOH A 55 494 283 HOH HOH . I 5 HOH A 56 495 284 HOH HOH . I 5 HOH A 57 496 285 HOH HOH . I 5 HOH A 58 497 286 HOH HOH . I 5 HOH A 59 498 287 HOH HOH . I 5 HOH A 60 499 289 HOH HOH . I 5 HOH A 61 500 291 HOH HOH . I 5 HOH A 62 501 292 HOH HOH . I 5 HOH A 63 502 293 HOH HOH . I 5 HOH A 64 503 294 HOH HOH . I 5 HOH A 65 504 295 HOH HOH . I 5 HOH A 66 505 296 HOH HOH . I 5 HOH A 67 506 297 HOH HOH . I 5 HOH A 68 507 298 HOH HOH . I 5 HOH A 69 508 299 HOH HOH . I 5 HOH A 70 509 300 HOH HOH . I 5 HOH A 71 510 301 HOH HOH . I 5 HOH A 72 511 302 HOH HOH . I 5 HOH A 73 512 303 HOH HOH . I 5 HOH A 74 513 304 HOH HOH . I 5 HOH A 75 514 305 HOH HOH . I 5 HOH A 76 515 306 HOH HOH . I 5 HOH A 77 516 307 HOH HOH . I 5 HOH A 78 517 308 HOH HOH . I 5 HOH A 79 518 309 HOH HOH . I 5 HOH A 80 519 310 HOH HOH . I 5 HOH A 81 520 311 HOH HOH . I 5 HOH A 82 521 312 HOH HOH . I 5 HOH A 83 522 313 HOH HOH . I 5 HOH A 84 523 314 HOH HOH . I 5 HOH A 85 524 316 HOH HOH . I 5 HOH A 86 525 318 HOH HOH . I 5 HOH A 87 526 321 HOH HOH . I 5 HOH A 88 527 323 HOH HOH . I 5 HOH A 89 528 324 HOH HOH . I 5 HOH A 90 529 327 HOH HOH . I 5 HOH A 91 530 328 HOH HOH . I 5 HOH A 92 531 329 HOH HOH . I 5 HOH A 93 532 330 HOH HOH . I 5 HOH A 94 533 331 HOH HOH . I 5 HOH A 95 534 333 HOH HOH . I 5 HOH A 96 535 335 HOH HOH . I 5 HOH A 97 536 336 HOH HOH . I 5 HOH A 98 537 337 HOH HOH . I 5 HOH A 99 538 338 HOH HOH . I 5 HOH A 100 539 339 HOH HOH . I 5 HOH A 101 540 340 HOH HOH . I 5 HOH A 102 541 341 HOH HOH . I 5 HOH A 103 542 343 HOH HOH . I 5 HOH A 104 543 344 HOH HOH . I 5 HOH A 105 544 345 HOH HOH . I 5 HOH A 106 545 347 HOH HOH . I 5 HOH A 107 546 348 HOH HOH . I 5 HOH A 108 547 349 HOH HOH . I 5 HOH A 109 548 350 HOH HOH . I 5 HOH A 110 549 352 HOH HOH . I 5 HOH A 111 550 353 HOH HOH . I 5 HOH A 112 551 354 HOH HOH . I 5 HOH A 113 552 355 HOH HOH . I 5 HOH A 114 553 356 HOH HOH . I 5 HOH A 115 554 357 HOH HOH . I 5 HOH A 116 555 358 HOH HOH . I 5 HOH A 117 556 359 HOH HOH . I 5 HOH A 118 557 360 HOH HOH . I 5 HOH A 119 558 361 HOH HOH . I 5 HOH A 120 559 362 HOH HOH . I 5 HOH A 121 560 363 HOH HOH . I 5 HOH A 122 561 365 HOH HOH . I 5 HOH A 123 562 367 HOH HOH . I 5 HOH A 124 563 368 HOH HOH . I 5 HOH A 125 564 369 HOH HOH . I 5 HOH A 126 565 370 HOH HOH . I 5 HOH A 127 566 371 HOH HOH . I 5 HOH A 128 567 372 HOH HOH . I 5 HOH A 129 568 373 HOH HOH . I 5 HOH A 130 569 374 HOH HOH . I 5 HOH A 131 570 377 HOH HOH . I 5 HOH A 132 571 380 HOH HOH . I 5 HOH A 133 572 381 HOH HOH . I 5 HOH A 134 573 382 HOH HOH . I 5 HOH A 135 574 384 HOH HOH . I 5 HOH A 136 575 385 HOH HOH . I 5 HOH A 137 576 386 HOH HOH . I 5 HOH A 138 577 387 HOH HOH . I 5 HOH A 139 578 388 HOH HOH . I 5 HOH A 140 579 390 HOH HOH . I 5 HOH A 141 580 391 HOH HOH . I 5 HOH A 142 581 393 HOH HOH . I 5 HOH A 143 582 394 HOH HOH . I 5 HOH A 144 583 396 HOH HOH . I 5 HOH A 145 584 398 HOH HOH . I 5 HOH A 146 585 400 HOH HOH . I 5 HOH A 147 586 401 HOH HOH . I 5 HOH A 148 587 402 HOH HOH . I 5 HOH A 149 588 403 HOH HOH . I 5 HOH A 150 589 405 HOH HOH . I 5 HOH A 151 590 406 HOH HOH . I 5 HOH A 152 591 407 HOH HOH . I 5 HOH A 153 592 408 HOH HOH . I 5 HOH A 154 593 410 HOH HOH . I 5 HOH A 155 594 411 HOH HOH . I 5 HOH A 156 595 412 HOH HOH . I 5 HOH A 157 596 413 HOH HOH . I 5 HOH A 158 597 414 HOH HOH . I 5 HOH A 159 598 415 HOH HOH . I 5 HOH A 160 599 416 HOH HOH . I 5 HOH A 161 600 418 HOH HOH . I 5 HOH A 162 601 419 HOH HOH . I 5 HOH A 163 602 420 HOH HOH . I 5 HOH A 164 603 421 HOH HOH . I 5 HOH A 165 604 422 HOH HOH . I 5 HOH A 166 605 423 HOH HOH . I 5 HOH A 167 606 424 HOH HOH . I 5 HOH A 168 607 425 HOH HOH . I 5 HOH A 169 608 426 HOH HOH . I 5 HOH A 170 609 427 HOH HOH . I 5 HOH A 171 610 428 HOH HOH . I 5 HOH A 172 611 429 HOH HOH . I 5 HOH A 173 612 431 HOH HOH . I 5 HOH A 174 613 432 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 4 50.263 45.17 -7.826 1 65.42 ? C1 EDO 439 A 1 HETATM 2 O O1 EDO . . . H 4 48.923 44.676 -7.807 1 67.56 ? O1 EDO 439 A 1 HETATM 3 C C2 EDO . . . H 4 51.165 44.206 -8.617 1 64.49 ? C2 EDO 439 A 1 HETATM 4 O O2 EDO . . . H 4 52.425 44.073 -7.961 1 69.46 ? O2 EDO 439 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 474 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #