data_1FN1 # _model_server_result.job_id MLQqvuKNkIc1BQ4BfdU5nQ _model_server_result.datetime_utc '2025-02-26 22:27:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fn1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3014}' # _entry.id 1FN1 # _exptl.entry_id 1FN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 336.431 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FN1 _cell.length_a 28.88 _cell.length_b 53.168 _cell.length_c 40.416 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FN1 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DG 1 A DG 1002 1_555 A P BRU 2 A BRU 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.688 ? covale ? covale2 A O3' BRU 2 A BRU 1003 1_555 A P DA 3 A DA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.643 ? covale ? covale3 B O3' DG 2 B DG 2002 1_555 B P BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.663 ? covale ? covale4 B O3' BRU 3 B BRU 2003 1_555 B P DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.69 ? metalc ? metalc1 A N7 DG 1 A DG 1002 1_555 C CO CO . A CO 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 B N7 DG 6 B DG 2006 1_555 E CO CO . B CO 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 E CO CO . B CO 4001 1_555 G O HOH . B HOH 4007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 E CO CO . B CO 4001 1_555 G O HOH . B HOH 4009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1002 1_555 B N3 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1002 1_555 B O2 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1002 1_555 B N4 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 BRU 2 A BRU 1003 1_555 B N1 DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 BRU 2 A BRU 1003 1_555 B N6 DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DA 3 A DA 1004 1_555 B N3 BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N6 DA 3 A DA 1004 1_555 B O4 BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 4 A DC 1005 1_555 B N1 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 4 A DC 1005 1_555 B O6 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 4 A DC 1005 1_555 B N2 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C20 H24 N4 O' _chem_comp.formula_weight 336.431 _chem_comp.id 8AD _chem_comp.mon_nstd_flag . _chem_comp.name 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 8AD doub 1 n y C1 C11 8AD sing 2 n y C1 H1 8AD sing 3 n n C2 C3 8AD sing 4 n y C2 H2 8AD sing 5 n n C3 C4 8AD doub 6 n y C3 H3 8AD sing 7 n n C4 C12 8AD sing 8 n y C4 CD1 8AD sing 9 n n C5 C6 8AD doub 10 n y C5 C14 8AD sing 11 n y C5 H5 8AD sing 12 n n C6 C7 8AD sing 13 n y C6 H6 8AD sing 14 n n C7 C8 8AD doub 15 n y C7 H7 8AD sing 16 n n C8 C13 8AD sing 17 n y C8 H8 8AD sing 18 n n C9 C11 8AD doub 19 n y C9 C13 8AD sing 20 n y C9 N9 8AD sing 21 n n N10 C12 8AD doub 22 n y N10 C14 8AD sing 23 n y C11 C12 8AD sing 24 n y C13 C14 8AD doub 25 n y N9 H9A 8AD sing 26 n n N9 H9B 8AD sing 27 n n CD1 OD1 8AD doub 28 n n CD1 ND1 8AD sing 29 n n ND1 CD2 8AD sing 30 n n ND1 HD1 8AD sing 31 n n ND2 CD5 8AD sing 32 n n ND2 CD7 8AD sing 33 n n ND2 CD8 8AD sing 34 n n CD2 CD3 8AD sing 35 n n CD2 HD21 8AD sing 36 n n CD2 HD22 8AD sing 37 n n CD3 CD4 8AD sing 38 n n CD3 HD31 8AD sing 39 n n CD3 HD32 8AD sing 40 n n CD4 CD5 8AD sing 41 n n CD4 HD41 8AD sing 42 n n CD4 HD42 8AD sing 43 n n CD5 HD51 8AD sing 44 n n CD5 HD52 8AD sing 45 n n CD7 HD71 8AD sing 46 n n CD7 HD72 8AD sing 47 n n CD7 HD73 8AD sing 48 n n CD8 HD81 8AD sing 49 n n CD8 HD82 8AD sing 50 n n CD8 HD83 8AD sing 51 n n # _atom_sites.entry_id 1FN1 _atom_sites.fract_transf_matrix[1][1] 0.034626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO A 1 4002 4002 CO CO . D 4 8AD A 1 3014 3014 8AD 8AD . E 3 CO B 1 4001 4001 CO CO . F 5 HOH A 1 4006 4006 HOH HOH . F 5 HOH A 2 4010 4010 HOH HOH . F 5 HOH A 3 4016 4016 HOH HOH . F 5 HOH A 4 4017 4017 HOH HOH . F 5 HOH A 5 4018 4018 HOH HOH . G 5 HOH B 1 4003 4003 HOH HOH . G 5 HOH B 2 4004 4004 HOH HOH . G 5 HOH B 3 4005 4005 HOH HOH . G 5 HOH B 4 4007 4007 HOH HOH . G 5 HOH B 5 4008 4008 HOH HOH . G 5 HOH B 6 4009 4009 HOH HOH . G 5 HOH B 7 4011 4011 HOH HOH . G 5 HOH B 8 4012 4012 HOH HOH . G 5 HOH B 9 4013 4013 HOH HOH . G 5 HOH B 10 4014 4014 HOH HOH . G 5 HOH B 11 4015 4015 HOH HOH . G 5 HOH B 12 4019 4019 HOH HOH . G 5 HOH B 13 4020 4020 HOH HOH . G 5 HOH B 14 4021 4021 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8AD . A . D 4 8.724 21.672 9.269 0.6 32.53 ? C1 8AD 3014 A 1 HETATM 2 C C1 8AD . B . D 4 9.996 22.681 7.858 0.2 26.76 ? C1 8AD 3014 A 1 HETATM 3 C C2 8AD . A . D 4 7.917 20.752 8.647 0.6 47.38 ? C2 8AD 3014 A 1 HETATM 4 C C2 8AD . B . D 4 9.216 22.155 8.859 0.2 28.85 ? C2 8AD 3014 A 1 HETATM 5 C C3 8AD . A . D 4 8.062 20.463 7.311 0.6 48.09 ? C3 8AD 3014 A 1 HETATM 6 C C3 8AD . B . D 4 9.43 22.548 10.16 0.2 24.47 ? C3 8AD 3014 A 1 HETATM 7 C C4 8AD . A . D 4 9.072 21.053 6.523 0.6 36.1 ? C4 8AD 3014 A 1 HETATM 8 C C4 8AD . B . D 4 10.412 23.487 10.543 0.2 24.55 ? C4 8AD 3014 A 1 HETATM 9 C C5 8AD . A . D 4 12.504 24.236 6.123 0.6 23.75 ? C5 8AD 3014 A 1 HETATM 10 C C5 8AD . B . D 4 13.938 26.346 9.252 0.2 14.48 ? C5 8AD 3014 A 1 HETATM 11 C C6 8AD . A . D 4 13.456 25.108 6.649 0.6 33.06 ? C6 8AD 3014 A 1 HETATM 12 C C6 8AD . B . D 4 14.791 26.948 8.34 0.2 12.06 ? C6 8AD 3014 A 1 HETATM 13 C C7 8AD . A . D 4 13.433 25.467 7.992 0.6 24.74 ? C7 8AD 3014 A 1 HETATM 14 C C7 8AD . B . D 4 14.67 26.649 6.982 0.2 21.1 ? C7 8AD 3014 A 1 HETATM 15 C C8 8AD . A . D 4 12.527 24.854 8.831 0.6 30.35 ? C8 8AD 3014 A 1 HETATM 16 C C8 8AD . B . D 4 13.697 25.756 6.555 0.2 22.86 ? C8 8AD 3014 A 1 HETATM 17 C C9 8AD . A . D 4 10.581 23.319 9.179 0.6 23.95 ? C9 8AD 3014 A 1 HETATM 18 C C9 8AD . B . D 4 11.845 24.148 7.097 0.2 20.98 ? C9 8AD 3014 A 1 HETATM 19 N N10 8AD . A . D 4 10.802 22.686 6.45 0.6 29.99 ? N10 8AD 3014 A 1 HETATM 20 N N10 8AD . B . D 4 12.186 24.904 9.774 0.2 29.24 ? N10 8AD 3014 A 1 HETATM 21 C C11 8AD . A . D 4 9.737 22.342 8.567 0.6 29.18 ? C11 8AD 3014 A 1 HETATM 22 C C11 8AD . B . D 4 11.028 23.596 8.129 0.2 21.77 ? C11 8AD 3014 A 1 HETATM 23 C C12 8AD . A . D 4 9.899 22.03 7.161 0.6 20.41 ? C12 8AD 3014 A 1 HETATM 24 C C12 8AD . B . D 4 11.254 24.003 9.503 0.2 22.3 ? C12 8AD 3014 A 1 HETATM 25 C C13 8AD . A . D 4 11.589 23.904 8.373 0.6 20.26 ? C13 8AD 3014 A 1 HETATM 26 C C13 8AD . B . D 4 12.833 25.096 7.462 0.2 23.95 ? C13 8AD 3014 A 1 HETATM 27 C C14 8AD . A . D 4 11.632 23.551 6.98 0.6 17.86 ? C14 8AD 3014 A 1 HETATM 28 C C14 8AD . B . D 4 12.969 25.428 8.859 0.2 22.73 ? C14 8AD 3014 A 1 HETATM 29 N N9 8AD . A . D 4 10.464 23.658 10.489 0.6 30.53 ? N9 8AD 3014 A 1 HETATM 30 N N9 8AD . B . D 4 11.587 23.846 5.796 0.2 7.71 ? N9 8AD 3014 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #