data_1FN1 # _model_server_result.job_id g19l-QHFDhjytnJFApyFYg _model_server_result.datetime_utc '2025-02-26 22:37:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1fn1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":4002}' # _entry.id 1FN1 # _exptl.entry_id 1FN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1FN1 _cell.length_a 28.88 _cell.length_b 53.168 _cell.length_c 40.416 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FN1 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DG 1 A DG 1002 1_555 A P BRU 2 A BRU 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.688 ? covale ? covale2 A O3' BRU 2 A BRU 1003 1_555 A P DA 3 A DA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.643 ? covale ? covale3 B O3' DG 2 B DG 2002 1_555 B P BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.663 ? covale ? covale4 B O3' BRU 3 B BRU 2003 1_555 B P DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.69 ? metalc ? metalc1 A N7 DG 1 A DG 1002 1_555 C CO CO . A CO 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 B N7 DG 6 B DG 2006 1_555 E CO CO . B CO 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 E CO CO . B CO 4001 1_555 G O HOH . B HOH 4007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 E CO CO . B CO 4001 1_555 G O HOH . B HOH 4009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1002 1_555 B N3 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1002 1_555 B O2 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1002 1_555 B N4 DC 5 B DC 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 BRU 2 A BRU 1003 1_555 B N1 DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O4 BRU 2 A BRU 1003 1_555 B N6 DA 4 B DA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DA 3 A DA 1004 1_555 B N3 BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N6 DA 3 A DA 1004 1_555 B O4 BRU 3 B BRU 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 4 A DC 1005 1_555 B N1 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 4 A DC 1005 1_555 B O6 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 4 A DC 1005 1_555 B N2 DG 2 B DG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1FN1 _atom_sites.fract_transf_matrix[1][1] 0.034626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO A 1 4002 4002 CO CO . D 4 8AD A 1 3014 3014 8AD 8AD . E 3 CO B 1 4001 4001 CO CO . F 5 HOH A 1 4006 4006 HOH HOH . F 5 HOH A 2 4010 4010 HOH HOH . F 5 HOH A 3 4016 4016 HOH HOH . F 5 HOH A 4 4017 4017 HOH HOH . F 5 HOH A 5 4018 4018 HOH HOH . G 5 HOH B 1 4003 4003 HOH HOH . G 5 HOH B 2 4004 4004 HOH HOH . G 5 HOH B 3 4005 4005 HOH HOH . G 5 HOH B 4 4007 4007 HOH HOH . G 5 HOH B 5 4008 4008 HOH HOH . G 5 HOH B 6 4009 4009 HOH HOH . G 5 HOH B 7 4011 4011 HOH HOH . G 5 HOH B 8 4012 4012 HOH HOH . G 5 HOH B 9 4013 4013 HOH HOH . G 5 HOH B 10 4014 4014 HOH HOH . G 5 HOH B 11 4015 4015 HOH HOH . G 5 HOH B 12 4019 4019 HOH HOH . G 5 HOH B 13 4020 4020 HOH HOH . G 5 HOH B 14 4021 4021 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 18.402 _atom_site.Cartn_y 12.3 _atom_site.Cartn_z 5.632 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 41.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 4002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 1330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #